FFCP PHASE1:Mm9::chr8:73891395..73891439,+: Difference between revisions
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{{FFCP|EntrezGene=67023|HGNC=|MCL_coexpression_id=208|UniProt=|association_with_transcript=-100bp_to_ENSMUST00000127517_5end|description=CAGE_peak_4_at_Use1_5end|id=chr8:73891395..73891439,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.81e-18!50;UBERON:0006238!5.81e-18!50;UBERON:0002616!1.99e-17!49;UBERON:0000033!6.15e-17!63;UBERON:0001049!4.20e-16!52;UBERON:0005068!4.20e-16!52;UBERON:0006241!4.20e-16!52;UBERON:0007135!4.20e-16!52;UBERON:0001017!1.93e-14!73;UBERON:0005743!1.93e-14!73;UBERON:0000073!4.50e-13!75;UBERON:0001016!4.50e-13!75;UBERON:0003080!1.31e-12!40;UBERON:0002780!5.04e-12!39;UBERON:0001890!5.04e-12!39;UBERON:0006240!5.04e-12!39;UBERON:0002346!3.87e-11!71;UBERON:0003075!3.87e-11!71;UBERON:0007284!3.87e-11!71;UBERON:0003056!7.95e-11!49;UBERON:0002020!8.53e-10!34;UBERON:0002791!8.81e-10!29;UBERON:0003528!8.81e-10!29;UBERON:0001893!8.81e-10!29;UBERON:0007811!5.50e-09!86;UBERON:0004121!6.21e-09!102;UBERON:0000924!6.21e-09!102;UBERON:0006601!6.21e-09!102;UBERON:0000153!1.14e-07!94;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.80e-18,54;UBERON:0000955,2.39e-16,47;UBERON:0006238,2.39e-16,47;UBERON:0001049,2.54e-16,52;UBERON:0005068,2.54e-16,52;UBERON:0006241,2.54e-16,52;UBERON:0007135,2.54e-16,52;UBERON:0002616,8.39e-16,46;UBERON:0001017,2.08e-15,73;UBERON:0001016,3.60e-14,75;UBERON:0002346,2.57e-13,64;UBERON:0003075,2.57e-13,64;UBERON:0007284,2.57e-13,64;UBERON:0003080,8.65e-13,40;UBERON:0002780,3.53e-12,39;UBERON:0001890,3.53e-12,39;UBERON:0006240,3.53e-12,39;UBERON:0004121,2.55e-11,95;UBERON:0000924,2.55e-11,95;UBERON:0006601,2.55e-11,95;UBERON:0010371,4.64e-11,73;UBERON:0010314,5.14e-11,92;UBERON:0003056,7.53e-11,49;UBERON:0003528,6.40e-10,29;UBERON:0002791,6.40e-10,29;UBERON:0001893,6.40e-10,29;UBERON:0002020,7.95e-10,34;UBERON:0000956,7.39e-07,21;UBERON:0001869,7.39e-07,21;UBERON:0000203,7.39e-07,21|phase1_expression=2.08193501236232,1.04692622291808,1.81999695755814,2.11724947914781,1.50268718983904,1.34303417529512,1.40167584357315,2.1950964985068,0.422366166455,0.468129052643987,0.34243593645101,0.159544317990673,1.36960583944965,1.66098764596095,0.333109761815663,0.202475267389826,0,3.15462165358238,3.42786084014347,2.54633791078818,4.76242424845991,0.397163804803541,0.522399578277871,1.11994695955385,1.83527424853736,0,0.86152399231815,0.430942465371778,3.04037471130198,1.26015064879965,0.221730510655305,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,8.37063261473815,7.813353445238,7.85285615960697,17.0587131528994,10.9287277593351,8.73918635456076,0.629484089877886,0.608261587317087,0.367093504323363,3.12956537739216,2.39827672018491,1.97717564461025,3.4997381833371,2.09979632438044,1.43752564364972,3.02008690903925,0.725362142011344,2.68875039313971,0.771778308107841,1.71920063963254,0.515672092277442,1.41621522601718,4.23192783417626,2.53532561402472,0.677689064138264,0,0.449949858640699,2.96659908770092,4.9733608046227,1.79760066311043,3.45796474789399,1.97010263386108,2.29510095163874,2.52389953621658,3.42781181284564,1.32521124570968,1.71487118900936,1.53352753629178,0.919218786610021,12.1127469099328,7.53355294702608,7.83393319606842,2.37395317914349,2.37867873366265,3.64639359389732,10.3297709630511,10.6924895906019,10.3902808488231,2.94628585473668,2.13557521198654,0.745597783301202,0.454357159999104,0.226714680320357,0.869593466105033,0.860423876981386,0,1.07940638327563,3.89865850468601,0,3.37066608316204,0.340860645156116,1.03914401841148,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,0.253359865475099,0.505524445014783,1.94112595522402,0.776813650941515,1.33597925158342,0.867426633830679,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.753999547978053,0.741584903203122,3.47038456607788,3.5384422077995,2.26473589926373,1.10420759230197,3.39412677194655,0,4.9772735491963,4.39838084308256,1.78819938646014,0.599075622529601,1.79970819298022,1.01656181658452,7.78911324905078,4.11750542536764,1.38219787324151,4.86708096538374,3.06858548796397,8.51930982694196,4.2182728397617,0.916554274652847,1.7416975885413,3.0326731012041,3.15662783829711,1.04096354370163,1.14951052216736,0.360124259610698,1.35634336052144,0.884474488967262,1.15302348256365,1.59292931751539,2.84573707812917,0,0.189106080167819,1.40760899331159,1.53437012699302,1.39023624612799,1.74126083261083,1.23469281844766,0.398068533636986,2.1066395619397,1.54408744268829,1.42081749697796,0.621377317606506,0.703578179943289,1.2604344302271,1.42046841351126,1.18058539048442,1.85120535464854,1.86027155800326,1.87791380979733,1.28441876603886,1.48103864922132,1.47750717671186,2.67527071501324,3.94739966048397,4.83010253640311,5.77087600669599,3.78521907415429,1.85228302282712,2.31293148088659,0.793351699990633,1.2797295032114,0,0.38660238396628,0.40336704924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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67023 | |||
|HGNC= | |||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-100bp_to_ENSMUST00000127517_5end | |||
|cluster_id=chr8:73891395..73891439,+ | |||
|description=CAGE_peak_4_at_Use1_5end | |||
|id=chr8:73891395..73891439,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.81e-18!50;UBERON:0006238!5.81e-18!50;UBERON:0002616!1.99e-17!49;UBERON:0000033!6.15e-17!63;UBERON:0001049!4.20e-16!52;UBERON:0005068!4.20e-16!52;UBERON:0006241!4.20e-16!52;UBERON:0007135!4.20e-16!52;UBERON:0001017!1.93e-14!73;UBERON:0005743!1.93e-14!73;UBERON:0000073!4.50e-13!75;UBERON:0001016!4.50e-13!75;UBERON:0003080!1.31e-12!40;UBERON:0002780!5.04e-12!39;UBERON:0001890!5.04e-12!39;UBERON:0006240!5.04e-12!39;UBERON:0002346!3.87e-11!71;UBERON:0003075!3.87e-11!71;UBERON:0007284!3.87e-11!71;UBERON:0003056!7.95e-11!49;UBERON:0002020!8.53e-10!34;UBERON:0002791!8.81e-10!29;UBERON:0003528!8.81e-10!29;UBERON:0001893!8.81e-10!29;UBERON:0007811!5.50e-09!86;UBERON:0004121!6.21e-09!102;UBERON:0000924!6.21e-09!102;UBERON:0006601!6.21e-09!102;UBERON:0000153!1.14e-07!94;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.80e-18,54;UBERON:0000955,2.39e-16,47;UBERON:0006238,2.39e-16,47;UBERON:0001049,2.54e-16,52;UBERON:0005068,2.54e-16,52;UBERON:0006241,2.54e-16,52;UBERON:0007135,2.54e-16,52;UBERON:0002616,8.39e-16,46;UBERON:0001017,2.08e-15,73;UBERON:0001016,3.60e-14,75;UBERON:0002346,2.57e-13,64;UBERON:0003075,2.57e-13,64;UBERON:0007284,2.57e-13,64;UBERON:0003080,8.65e-13,40;UBERON:0002780,3.53e-12,39;UBERON:0001890,3.53e-12,39;UBERON:0006240,3.53e-12,39;UBERON:0004121,2.55e-11,95;UBERON:0000924,2.55e-11,95;UBERON:0006601,2.55e-11,95;UBERON:0010371,4.64e-11,73;UBERON:0010314,5.14e-11,92;UBERON:0003056,7.53e-11,49;UBERON:0003528,6.40e-10,29;UBERON:0002791,6.40e-10,29;UBERON:0001893,6.40e-10,29;UBERON:0002020,7.95e-10,34;UBERON:0000956,7.39e-07,21;UBERON:0001869,7.39e-07,21;UBERON:0000203,7.39e-07,21 | |||
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| |||
|short_description=p4@Use1 | |||
}} |
Revision as of 01:43, 4 August 2015
Short description: | p4@Use1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Use1_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | -100bp_to_ENSMUST00000127517_5end |
EntrezGene: | 67023 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.80e-18 | 54 |
brain | 2.39e-16 | 47 |
future brain | 2.39e-16 | 47 |
neural tube | 2.54e-16 | 52 |
neural rod | 2.54e-16 | 52 |
future spinal cord | 2.54e-16 | 52 |
neural keel | 2.54e-16 | 52 |
regional part of brain | 8.39e-16 | 46 |
central nervous system | 2.08e-15 | 73 |
nervous system | 3.60e-14 | 75 |
neurectoderm | 2.57e-13 | 64 |
neural plate | 2.57e-13 | 64 |
presumptive neural plate | 2.57e-13 | 64 |
anterior neural tube | 8.65e-13 | 40 |
regional part of forebrain | 3.53e-12 | 39 |
forebrain | 3.53e-12 | 39 |
future forebrain | 3.53e-12 | 39 |
ectoderm-derived structure | 2.55e-11 | 95 |
ectoderm | 2.55e-11 | 95 |
presumptive ectoderm | 2.55e-11 | 95 |
ecto-epithelium | 4.64e-11 | 73 |
structure with developmental contribution from neural crest | 5.14e-11 | 92 |
pre-chordal neural plate | 7.53e-11 | 49 |
brain grey matter | 6.40e-10 | 29 |
regional part of telencephalon | 6.40e-10 | 29 |
telencephalon | 6.40e-10 | 29 |
gray matter | 7.95e-10 | 34 |
cerebral cortex | 7.39e-07 | 21 |
cerebral hemisphere | 7.39e-07 | 21 |
pallium | 7.39e-07 | 21 |