FF:10160-103A7: Difference between revisions

Revision as of 14:46, 15 May 2017

Name:	pineal gland, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12228
Sample type:	tissues
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	pineal gland
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005634

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12228		CAGE		DRX008707		DRR009579

Accession ID Hg19

Library id		BAM		CTSS
CNhs12228		DRZ001004		DRZ002389

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.481
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.294
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.223
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.126
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.126
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0.126
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.32
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.327
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.126
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.184
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.246
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	1.29
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.849
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.126
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.126
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	1.199
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.526
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0535
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0608
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.869
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.126
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.126
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.568
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.526
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.126
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.223
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.126
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.126
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.223
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0.805
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12228

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0339
MA0003.1	MA0003.1	0.28
MA0004.1	MA0004.1	0.341
MA0006.1	MA0006.1	0.255
MA0007.1	MA0007.1	0.207
MA0009.1	MA0009.1	0.243
MA0014.1	MA0014.1	0.707
MA0017.1	MA0017.1	0.00368
MA0018.2	MA0018.2	0.00267
MA0019.1	MA0019.1	0.718
MA0024.1	MA0024.1	0.96
MA0025.1	MA0025.1	0.495
MA0027.1	MA0027.1	0.891
MA0028.1	MA0028.1	0.885
MA0029.1	MA0029.1	0.517
MA0030.1	MA0030.1	0.223
MA0031.1	MA0031.1	0.574
MA0035.2	MA0035.2	0.155
MA0038.1	MA0038.1	0.052
MA0039.2	MA0039.2	0.26
MA0040.1	MA0040.1	0.45
MA0041.1	MA0041.1	0.583
MA0042.1	MA0042.1	0.827
MA0043.1	MA0043.1	0.38
MA0046.1	MA0046.1	0.0975
MA0047.2	MA0047.2	0.0451
MA0048.1	MA0048.1	0.158
MA0050.1	MA0050.1	0.0702
MA0051.1	MA0051.1	0.0397
MA0052.1	MA0052.1	0.169
MA0055.1	MA0055.1	0.0552
MA0057.1	MA0057.1	0.538
MA0058.1	MA0058.1	0.275
MA0059.1	MA0059.1	0.0243
MA0060.1	MA0060.1	0.0288
MA0061.1	MA0061.1	0.00884
MA0062.2	MA0062.2	0.244
MA0065.2	MA0065.2	0.00275
MA0066.1	MA0066.1	0.0944
MA0067.1	MA0067.1	0.42
MA0068.1	MA0068.1	0.157
MA0069.1	MA0069.1	0.773
MA0070.1	MA0070.1	0.968
MA0071.1	MA0071.1	0.49
MA0072.1	MA0072.1	0.106
MA0073.1	MA0073.1	0.502
MA0074.1	MA0074.1	0.336
MA0076.1	MA0076.1	0.587
MA0077.1	MA0077.1	0.756
MA0078.1	MA0078.1	0.724
MA0079.2	MA0079.2	0.941
MA0080.2	MA0080.2	2.82078e-8
MA0081.1	MA0081.1	0.0939
MA0083.1	MA0083.1	0.0085
MA0084.1	MA0084.1	0.849
MA0087.1	MA0087.1	0.704
MA0088.1	MA0088.1	0.512
MA0090.1	MA0090.1	0.161
MA0091.1	MA0091.1	0.395
MA0092.1	MA0092.1	0.195
MA0093.1	MA0093.1	0.372
MA0099.2	MA0099.2	6.1537e-14
MA0100.1	MA0100.1	0.626
MA0101.1	MA0101.1	0.00555
MA0102.2	MA0102.2	0.185
MA0103.1	MA0103.1	0.162
MA0104.2	MA0104.2	0.429
MA0105.1	MA0105.1	0.00232
MA0106.1	MA0106.1	0.0765
MA0107.1	MA0107.1	0.00531
MA0108.2	MA0108.2	0.214
MA0111.1	MA0111.1	0.79
MA0112.2	MA0112.2	0.00256
MA0113.1	MA0113.1	0.251
MA0114.1	MA0114.1	0.0164
MA0115.1	MA0115.1	0.924
MA0116.1	MA0116.1	0.0139
MA0117.1	MA0117.1	0.951
MA0119.1	MA0119.1	0.175
MA0122.1	MA0122.1	0.693
MA0124.1	MA0124.1	0.214
MA0125.1	MA0125.1	0.341
MA0131.1	MA0131.1	0.674
MA0135.1	MA0135.1	0.0153
MA0136.1	MA0136.1	3.35787e-8
MA0137.2	MA0137.2	0.743
MA0138.2	MA0138.2	0.708
MA0139.1	MA0139.1	0.619
MA0140.1	MA0140.1	0.145
MA0141.1	MA0141.1	0.019
MA0142.1	MA0142.1	0.898
MA0143.1	MA0143.1	0.814
MA0144.1	MA0144.1	0.0527
MA0145.1	MA0145.1	0.21
MA0146.1	MA0146.1	0.0292
MA0147.1	MA0147.1	0.224
MA0148.1	MA0148.1	0.033
MA0149.1	MA0149.1	0.0929
MA0150.1	MA0150.1	0.00149
MA0152.1	MA0152.1	0.894
MA0153.1	MA0153.1	0.347
MA0154.1	MA0154.1	0.0278
MA0155.1	MA0155.1	0.331
MA0156.1	MA0156.1	1.47004e-5
MA0157.1	MA0157.1	0.484
MA0159.1	MA0159.1	0.0325
MA0160.1	MA0160.1	0.0844
MA0162.1	MA0162.1	0.0494
MA0163.1	MA0163.1	6.35692e-5
MA0164.1	MA0164.1	0.308
MA0258.1	MA0258.1	0.0419
MA0259.1	MA0259.1	0.702

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12228

Novel motif	Logo	P-value
1	1	0.143
10	10	0.0538
100	100	0.212
101	101	0.766
102	102	0.95
103	103	0.0347
104	104	0.191
105	105	0.816
106	106	0.00426
107	107	0.00833
108	108	0.631
109	109	0.00785
11	11	0.028
110	110	0.0982
111	111	0.0415
112	112	0.791
113	113	0.437
114	114	0.308
115	115	0.654
116	116	0.292
117	117	0.031
118	118	0.0458
119	119	0.236
12	12	0.935
120	120	0.153
121	121	0.566
122	122	0.827
123	123	0.811
124	124	0.294
125	125	0.576
126	126	0.365
127	127	0.883
128	128	0.0795
129	129	0.352
13	13	0.0193
130	130	0.551
131	131	0.0668
132	132	0.506
133	133	0.0625
134	134	0.539
135	135	0.88
136	136	0.00727
137	137	0.833
138	138	0.332
139	139	0.55
14	14	0.752
140	140	0.116
141	141	0.504
142	142	0.68
143	143	0.133
144	144	0.571
145	145	0.0881
146	146	0.309
147	147	0.365
148	148	0.033
149	149	0.187
15	15	0.0338
150	150	0.192
151	151	0.462
152	152	0.0186
153	153	0.884
154	154	0.732
155	155	0.749
156	156	0.498
157	157	0.368
158	158	0.0159
159	159	0.0066
16	16	0.0526
160	160	0.0375
161	161	0.0753
162	162	0.497
163	163	0.593
164	164	0.0176
165	165	0.0505
166	166	0.819
167	167	0.412
168	168	0.588
169	169	0.019
17	17	0.0348
18	18	0.0952
19	19	0.224
2	2	0.716
20	20	0.264
21	21	0.186
22	22	0.254
23	23	0.202
24	24	0.158
25	25	0.398
26	26	4.92845e-4
27	27	0.604
28	28	0.812
29	29	0.0114
3	3	0.0927
30	30	0.807
31	31	0.867
32	32	0.0067
33	33	0.076
34	34	0.64
35	35	0.807
36	36	0.164
37	37	0.083
38	38	0.332
39	39	0.173
4	4	0.996
40	40	0.0253
41	41	0.153
42	42	0.461
43	43	0.117
44	44	0.136
45	45	0.714
46	46	0.0492
47	47	0.183
48	48	0.136
49	49	0.227
5	5	0.37
50	50	0.3
51	51	0.302
52	52	0.277
53	53	0.855
54	54	0.36
55	55	0.789
56	56	0.487
57	57	0.179
58	58	0.376
59	59	0.0546
6	6	0.686
60	60	0.0538
61	61	0.0605
62	62	0.377
63	63	0.0564
64	64	0.414
65	65	0.12
66	66	0.218
67	67	0.36
68	68	0.12
69	69	0.0411
7	7	0.168
70	70	0.00411
71	71	0.0118
72	72	0.655
73	73	0.0244
74	74	0.767
75	75	0.0639
76	76	0.282
77	77	0.159
78	78	0.0745
79	79	0.365
8	8	0.00915
80	80	0.843
81	81	0.256
82	82	0.648
83	83	0.17
84	84	0.415
85	85	0.0853
86	86	0.5
87	87	8.57144e-5
88	88	0.917
89	89	0.151
9	9	0.632
90	90	0.241
91	91	0.575
92	92	0.301
93	93	0.911
94	94	0.0702
95	95	0.015
96	96	0.767
97	97	0.698
98	98	0.205
99	99	0.477

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12228

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010160 human pineal gland - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001905 (pineal body)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0003296 (gland of diencephalon)
0010133 (neuroendocrine gland)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002784 (regional part of diencephalon)
0002757 (regional part of epithalamus)
0010134 (secretory circumventricular organ)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005408 (circumventricular organ)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0000949 (endocrine system)
0001899 (epithalamus)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010160 (human pineal gland - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr1:157069590..157069607,-!p1@ETV3L!3.43!2711.79!ETV3L;;chr12:55413751..55413765,+!p1@NEUROD4!3.06!1147.74!NEUROD4;;chr19:48325184..48325211,+!p1@CRX!2.84!684.34!CRX;;chr14:57277178..57277203,-!p1@OTX2!2.75!567.65!OTX2;;chr5:134871645..134871660,-!p1@NEUROG1!2.74!544.11!NEUROG1;;chr9:77112244..77112262,+!p1@RORB!2.46!322.16!RORB;;chr2:182545234..182545252,-!p1@NEUROD1!2.32!209.50!NEUROD1;;chr12:54779511..54779577,-!p5@ZNF385A!2.29!192.35!ZNF385A;;chr13:72441315..72441454,-!p1@DACH1!2.27!355.12!DACH1;;chr1:216896752..216896778,-!p1@ESRRG!2.27!186.30!ESRRG;;chr11:122852529..122852549,-!p1@BSX!2.21!162.43!BSX;;chr3:52002194..52002250,-!p5@PCBP4!2.21!160.07!PCBP4;;chr12:55413721..55413728,+!p3@NEUROD4!2.08!119.72!NEUROD4;;chr2:166326200..166326216,+!p1@CSRNP3!2.07!168.48!CSRNP3;;chr1:157069495..157069541,-!p2@ETV3L!2.06!115.01!ETV3L;;chr12:55413694..55413703,+!p2@NEUROD4!2.05!109.96!NEUROD4;;chr8:53162037..53162058,-!p5@ST18!1.99!96.51!ST18;;chr14:57272369..57272391,-!p2@OTX2!1.98!95.17!OTX2;;chr1:157069619..157069633,-!p3@ETV3L!1.96!90.12!ETV3L;;chr5:124084493..124084524,-!p2@ZNF608!1.95!188.66!ZNF608;;chr1:10754477..10754517,-!p1@CASZ1!1.87!118.37!CASZ1;;chr19:3772220..3772236,-!p1@RAX2!1.87!72.97!RAX2;;chr1:165414325..165414369,-!p1@RXRG!1.87!72.30!RXRG;;chr14:57277098..57277116,-!p3@OTX2!1.77!58.51!OTX2;;chr7:63505799..63505904,+!p1@ZNF727!1.76!56.50!ZNF727;;chr9:114287433..114287513,+!p1@ZNF483!1.74!135.19!ZNF483;;chr17:53342311..53342400,+!p1@HLF!1.71!56.83!HLF;;chr20:62795951..62795965,+!p3@MYT1!1.71!49.77!MYT1;;chr9:139094988..139095012,-!p1@LHX3!1.71!49.77!LHX3;;chr12:26277956..26277980,-!p1@BHLHE41!1.67!159.06!BHLHE41;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.65!44.05!ZBED1;;chr12:26277817..26277863,-!p2@BHLHE41!1.64!57.50!BHLHE41;;chr8:135522475..135522486,-!p16@ZFAT!1.64!43.04!ZFAT;;chr8:53166899..53166914,-!p3@ST18!1.64!43.04!ST18;;chr2:223163706..223163730,-!p1@PAX3!1.62!41.03!PAX3;;chr15:76629123..76629151,+!p1@ISL2!1.60!42.71!ISL2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.60!39.01!ZNF676;;chr7:149470641..149470694,-!p1@ZNF467!1.58!159.73!ZNF467;;chr1:40105299..40105326,-!p1@HEYL!1.58!36.99!HEYL;;chr13:72441506..72441562,-!p3@DACH1!1.58!36.65!DACH1;;chr19:38085768..38085821,+!p1@ZNF540!1.56!51.79!ZNF540;;chr1:157069555..157069569,-!p4@ETV3L!1.52!31.95!ETV3L;;chr12:24715376..24715432,-!p1@SOX5!1.49!37.33!SOX5;;chr1:216896780..216896800,-!p2@ESRRG!1.49!29.93!ESRRG;;chr12:54785074..54785122,-!p2@ZNF385A!1.48!44.05!ZNF385A;;chr16:51185318..51185348,-!p2@SALL1!1.48!29.26!SALL1;;chr1:8877692..8877732,-!p1@RERE!1.46!214.89!RERE;;chr14:58797974..58798011,+!p3@ARID4A!1.46!27.91!ARID4A;;chr16:51185489..51185501,-!p6@SALL1!1.45!27.24!SALL1;;chr16:51185573..51185593,-!p3@SALL1!1.45!27.24!SALL1;;chr19:22193731..22193751,-!p1@ZNF208!1.44!26.23!ZNF208;;chr14:57277163..57277168,-!p4@OTX2!1.44!26.23!OTX2;;chr11:122852557..122852570,-!p2@BSX!1.42!25.56!BSX;;chr1:180199393..180199426,+!p1@LHX4!1.42!25.56!LHX4;;chr16:51185172..51185197,-!p1@SALL1!1.42!25.56!SALL1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.40!50.11!ZNF395;;chr13:72441074..72441172,-!p2@DACH1!1.40!24.21!DACH1;;chr3:147127142..147127168,+!p1@ZIC1!1.40!23.88!ZIC1;;chr1:61548069..61548102,+!p3@NFIA!1.39!56.50!NFIA;;chr3:114819124..114819200,-!p3@ZBTB20!1.39!53.47!ZBTB20;;chr5:134871183..134871197,-!p3@NEUROG1!1.39!23.54!NEUROG1;;chr3:52001448..52001478,-!p2@PCBP4!1.38!310.05!PCBP4;;chr21:47063625..47063658,+!p1@PCBP3!1.38!97.86!PCBP3;;chr17:7492684..7492778,-!p2@SOX15!1.38!48.09!SOX15;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.37!22.53!SMARCE1;;chr2:95963052..95963106,+!p1@KCNIP3!1.36!21.86!KCNIP3;;chr1:10856639..10856662,-!p2@CASZ1!1.36!21.86!CASZ1;;chr5:88178983..88179012,-!p1@MEF2C!1.35!158.73!MEF2C;;chr17:38465441..38465481,+!p6@RARA!1.34!25.56!RARA;;chr15:60884706..60884743,-!p1@RORA!1.33!103.91!RORA;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.33!20.51!PEG3;;chr7:100065686..100065701,-!p2@TSC22D4!1.32!19.84!TSC22D4;;chr7:73038839..73038862,-!p1@MLXIPL!1.32!19.84!MLXIPL;;chr3:114173720..114173794,-!p6@ZBTB20!1.32!19.84!ZBTB20;;chr9:77112225..77112238,+!p2@RORB!1.31!19.50!RORB;;chr9:109625401..109625458,+!p1@ZNF462!1.30!49.43!ZNF462;;chr5:124081008..124081016,-!p28@ZNF608!1.30!19.17!ZNF608;;chr3:181429704..181429722,+!p1@SOX2!1.30!18.83!SOX2;;chr22:38380543..38380569,-!p1@SOX10!1.29!18.50!SOX10;;chr17:38256822..38256851,-!p1@NR1D1!1.28!138.21!NR1D1;;chr1:10856665..10856683,-!p4@CASZ1!1.28!18.16!CASZ1;;chr1:165414227..165414242,-!p2@RXRG!1.28!18.16!RXRG;;chr1:244219775..244219893,+!p2@ZNF238!1.27!24.21!ZNF238;;chr22:41763452..41763466,+!p2@TEF!1.27!17.82!TEF;;chr1:217262933..217262968,-!p3@ESRRG!1.27!17.49!ESRRG;;chr21:34442439..34442455,+!p1@OLIG1!1.26!17.15!OLIG1;;chr14:73360799..73360817,-!p1@DPF3!1.25!57.17!DPF3;;chr14:21994337..21994442,-!p1@SALL2!1.25!46.07!SALL2;;chr2:182545282..182545294,-!p2@NEUROD1!1.25!16.81!NEUROD1;;chr5:124084466..124084484,-!p6@ZNF608!1.25!16.81!ZNF608;;chr3:128206762..128206781,-!p2@GATA2!1.24!100.55!GATA2;;chr3:18466787..18466839,-!p1@SATB1!1.23!69.95!SATB1;;chr1:61547894..61547968,+!p2@NFIA!1.23!46.41!NFIA;;chr15:61521417..61521460,-!p2@RORA!1.23!35.31!RORA;;chr7:74072135..74072171,+!p2@GTF2I!1.22!48.09!GTF2I;;chr8:93107451..93107468,-!p2@RUNX1T1!1.22!15.47!RUNX1T1;;chr5:88179017..88179046,-!p2@MEF2C!1.21!60.53!MEF2C;;chr2:145277882..145277967,-!p3@ZEB2!1.21!25.89!ZEB2;;chr10:35484053..35484076,+!p1@CREM!1.20!36.65!CREM;;chr19:46801639..46801699,+!p1@HIF3A!1.20!14.80!HIF3A;;chr1:61548225..61548299,+!p1@NFIA!1.19!184.96!NFIA;;chr2:214016314..214016343,-!p2@IKZF2!1.19!24.21!IKZF2;;chr12:26277929..26277955,-!p3@BHLHE41!1.19!20.51!BHLHE41;;chr3:114173859..114173873,-!p15@ZBTB20!1.19!14.46!ZBTB20;;chr17:36861496..36861586,+!p1@MLLT6!1.17!133.50!MLLT6;;chr14:21994449..21994524,-!p2@SALL2!1.17!41.36!SALL2;;chr11:31832658..31832681,-!p1@PAX6!1.17!13.79!PAX6;;chr16:51185544..51185555,-!p7@SALL1!1.17!13.79!SALL1;;chr15:61521462..61521482,-!p4@RORA!1.16!13.45!RORA;;chr8:53162019..53162028,-!p12@ST18!1.16!13.45!ST18;;chr1:10856694..10856715,-!p3@CASZ1!1.16!13.45!CASZ1;;chr3:147127177..147127194,+!p2@ZIC1!1.16!13.45!ZIC1;;chr10:111987079..111987115,+!p3@MXI1!1.15!18.16!MXI1;;chr12:54785054..54785072,-!p4@ZNF385A!1.15!14.80!ZNF385A;;chr20:62796052..62796067,+!p5@MYT1!1.15!13.12!MYT1;;chr9:139096968..139096979,-!p2@LHX3!1.15!13.12!LHX3;;chr6:15246200..15246214,+!p2@JARID2!1.14!34.97!JARID2;;chr2:16080659..16080685,+!p1@MYCN!1.14!12.78!MYCN;;chr16:51185511..51185522,-!p9@SALL1!1.14!12.78!SALL1;;chr14:58798013..58798071,+!p2@ARID4A!1.14!12.78!ARID4A;;chr9:3525867..3525902,-!p3@RFX3!1.13!42.71!RFX3;;chr15:57511609..57511651,+!p2@TCF12!1.13!20.85!TCF12;;chr11:8040739..8040815,+!p4@TUB!1.13!12.44!TUB;;chr12:106976678..106976708,+!p2@RFX4!1.13!12.44!RFX4;;chr3:114477934..114477961,-!p14@ZBTB20!1.13!12.44!ZBTB20;;chr9:139095030..139095040,-!p4@LHX3!1.13!12.44!LHX3;;chr2:178128250..178128293,-!p6@NFE2L2!1.12!30.60!NFE2L2;;chr20:45142154..45142227,-!p1@ZNF334!1.12!24.55!ZNF334;;chr19:37998036..37998098,+!p2@ZNF793!1.12!15.13!ZNF793;;chr14:21562671..21562702,-!p8@ZNF219!1.12!12.11!ZNF219;;chr8:77593474..77593612,+!p1@ZFHX4!1.11!50.44!ZFHX4;;chr2:74229812..74229867,+!p1@TET3!1.11!29.93!TET3;;chr5:178368186..178368238,+!p1@ZNF454!1.11!21.52!ZNF454;;chr19:38042240..38042309,+!p2@ZNF540!1.09!17.15!ZNF540;;chr15:61521495..61521506,-!p5@RORA!1.08!11.10!RORA;;chr7:39125511..39125560,+!p1@POU6F2!1.08!11.10!POU6F2;;chr12:24102576..24102623,-!p2@SOX5!1.08!11.10!SOX5;;chr19:40562072..40562143,-!p1@ZNF780B!1.07!98.19!ZNF780B;;chr9:3525968..3526016,-!p1@RFX3!1.07!62.89!RFX3;;chr15:80696703..80696754,+!p1@ARNT2!1.07!14.46!ARNT2;;chr1:61548118..61548129,+!p9@NFIA!1.07!12.11!NFIA;;chr3:114819101..114819121,-!p7@ZBTB20!1.07!10.76!ZBTB20;;chr3:52001426..52001447,-!p3@PCBP4!1.06!29.59!PCBP4;;chr19:52391147..52391218,-!p1@ZNF577!1.05!32.28!ZNF577;;chr9:2015275..2015287,+!p8@SMARCA2!1.05!16.48!SMARCA2;;chr7:74072175..74072188,+!p6@GTF2I!1.05!14.12!GTF2I;;chrX:101186981..101187030,-!p1@ZMAT1!1.04!33.29!ZMAT1;;chr11:63684602..63684664,-!p1@RCOR2!1.04!19.84!RCOR2;;chr11:47400078..47400106,-!p1@SPI1!1.04!10.09!SPI1;;chr14:21562648..21562658,-!p22@ZNF219!1.04!10.09!ZNF219;;chr16:51185149..51185160,-!p5@SALL1!1.04!10.09!SALL1;;chr17:37764128..37764258,-!p1@NEUROD2!1.04!10.09!NEUROD2;;chr3:114866084..114866118,-!p2@ZBTB20!1.03!35.98!ZBTB20;;chr1:8877735..8877760,-!p8@RERE!1.03!26.23!RERE;;chr1:164528687..164528711,+!p6@PBX1!1.03!11.43!PBX1;;chrX:118739835..118739862,-!p1@NKRF!1.03!10.76!NKRF;;chr9:77230443..77230455,+!p6@RORB!1.03!9.75!RORB;;chr19:46800289..46800327,+!p2@HIF3A!1.03!9.75!HIF3A;;chr1:165414259..165414273,-!p6@RXRG!1.03!9.75!RXRG;;chr4:149363662..149363688,-!p6@NR3C2!1.03!9.75!NR3C2;;chr2:178128199..178128245,-!p3@NFE2L2!1.02!51.45!NFE2L2;;chr19:38183208..38183225,-!p1@ZNF781!1.02!12.11!ZNF781;;chr8:93115584..93115642,-!p5@RUNX1T1!1.02!9.42!RUNX1T1;;chr18:52989031..52989079,-!p2@TCF4!1.01!22.19!TCF4;;chr14:75894391..75894435,+!p2@JDP2!1.01!10.76!JDP2;;chr17:40897043..40897087,-!p1@EZH1!1.00!81.04!EZH1;;chr19:37096139..37096170,-!p2@ZNF529!1.00!25.56!ZNF529;;chr3:44626446..44626477,+!p1@ZNF660!1.00!16.48!ZNF660;;chr17:38465413..38465438,+!p5@RARA!1.00!14.46!RARA;;chr16:67197654..67197716,+!p3@HSF4!1.00!9.08!HSF4;;chr2:182545296..182545307,-!p3@NEUROD1!1.00!9.08!NEUROD1;;chr2:214016254..214016282,-!p7@IKZF2!1.00!9.08!IKZF2;;chr3:187463179..187463201,-!p2@BCL6!0.99!36.65!BCL6;;chr17:36861675..36861697,+!p3@MLLT6!0.99!20.85!MLLT6;;chr10:70320074..70320106,+!p1@TET1!0.99!17.82!TET1;;chr3:42947600..42947680,+!p1@ZNF662!0.99!12.78!ZNF662;;chr3:114819047..114819069,-!p16@ZBTB20!0.99!8.74!ZBTB20;;chrX:118739782..118739829,-!p2@NKRF!0.99!8.74!NKRF;;chr1:216896801..216896812,-!p5@ESRRG!0.99!8.74!ESRRG;;chr1:217262969..217262995,-!p7@ESRRG!0.99!8.74!ESRRG;;chr19:49140609..49140643,-!p1@DBP!0.98!49.43!DBP;;chr4:146859927..146860055,-!p1@ZNF827!0.97!51.45!ZNF827;;chr19:37096194..37096235,+!p1@ZNF382!0.97!27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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000949;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001894;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001905;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0010133
 |ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=

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FF:10160-103A7: Difference between revisions

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Revision as of 14:46, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0