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|has_quality=
|has_quality=
|id=FF:11763-123H8
|id=FF:11763-123H8
|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000280
|is_a=EFO:0002091;;FF:0000280
|is_obsolete=
|name=tenocyte, donor1
|name=tenocyte, donor1
|namespace=FANTOM5
|namespace=FANTOM5
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|sample_tissue=tendon
|sample_tissue=tendon
|top_motifs=UFEwm:2.95529478579;ALX4:2.75550724581;NKX2-2,8:2.53214992808;EVI1:2.45298982908;TAL1_TCF{3,4,12}:2.39713680922;HMGA1,2:2.28822733837;PAX1,9:2.17303600129;ESR1:2.1303696505;EN1,2:2.07138233052;HES1:1.84206049341;MYBL2:1.81027102434;ZNF238:1.79375227106;NR6A1:1.73292876389;GLI1..3:1.63657061507;XBP1:1.62268909658;RXRA_VDR{dimer}:1.52852089282;GZF1:1.49272566581;RXR{A,B,G}:1.47118943063;FOXL1:1.44050559278;HOX{A4,D4}:1.28575751689;NKX3-1:1.27980345962;GCM1,2:1.25871389061;TFCP2:1.24751163861;KLF4:1.21227773623;ATF6:1.19990886225;EBF1:1.18757550029;CDC5L:1.18192799756;NANOG{mouse}:1.16827180831;DBP:1.16827178617;ZNF423:1.15728423013;GFI1B:1.04877539054;NR3C1:0.971073429831;SPZ1:0.963954172314;HOX{A5,B5}:0.939253584615;HAND1,2:0.938046044608;GATA4:0.931935934757;TP53:0.930612074574;NFATC1..3:0.892742512238;TFAP4:0.885654271457;NKX3-2:0.836185815423;GTF2I:0.823488364284;AIRE:0.819710522277;ARID5B:0.807897305548;SMAD1..7,9:0.797705599743;TEAD1:0.786918779101;ZIC1..3:0.786716196149;PAX4:0.782690047611;MTF1:0.777880447019;ZNF384:0.771821422021;NR1H4:0.742185004754;GTF2A1,2:0.73759137932;FOXO1,3,4:0.73527335287;HMX1:0.734316409137;TFAP2{A,C}:0.700805904995;NFE2L1:0.675114187683;TEF:0.655863118375;HSF1,2:0.60875704639;YY1:0.59701860011;POU3F1..4:0.588413151391;MAFB:0.588082942966;PAX5:0.538538078631;RREB1:0.512249137747;MZF1:0.502201580459;PATZ1:0.49245330635;ZBTB6:0.480056027864;STAT2,4,6:0.477006888888;MTE{core}:0.4757786656;TBP:0.458397470079;MYB:0.456149906658;IRF1,2:0.44849940339;SRF:0.441846602074;TLX1..3_NFIC{dimer}:0.439386735596;PRDM1:0.400389099165;XCPE1{core}:0.378157218047;LHX3,4:0.368144932692;IKZF1:0.343697935299;CDX1,2,4:0.321723452355;NFE2L2:0.312116901124;HIC1:0.282617332623;PAX8:0.255143124445;SOX17:0.21445416935;LMO2:0.19251458348;MAZ:0.175793426518;HLF:0.173200837;ZNF148:0.168665873468;TFAP2B:0.165550914663;ZBTB16:0.157434139342;PPARG:0.113404666526;REST:0.108718186038;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.105465854018;POU6F1:0.0981819012594;FOXD3:0.0664781520215;EP300:0.00820250155585;AR:-0.0159922627452;VSX1,2:-0.0220470078285;MYFfamily:-0.0254629613012;HOX{A6,A7,B6,B7}:-0.0321999431482;HNF1A:-0.0490771001502;GFI1:-0.0618377171411;DMAP1_NCOR{1,2}_SMARC:-0.0677704528432;NHLH1,2:-0.0795438923995;POU5F1:-0.0993539813279;IRF7:-0.106674136773;BACH2:-0.111542485088;HBP1_HMGB_SSRP1_UBTF:-0.13364779149;RUNX1..3:-0.138985530804;TFDP1:-0.15108976255;TOPORS:-0.172826336341;ZNF143:-0.227159027079;BPTF:-0.242173017641;E2F1..5:-0.25103271045;EGR1..3:-0.25157256502;HOXA9_MEIS1:-0.271259109552;FOS_FOS{B,L1}_JUN{B,D}:-0.297768123586;FOXM1:-0.298266630469;NKX2-3_NKX2-5:-0.30864996858;NFIX:-0.324426606593;MED-1{core}:-0.325865352121;STAT1,3:-0.329261710998;NFKB1_REL_RELA:-0.337988879958;HNF4A_NR2F1,2:-0.34167631142;TBX4,5:-0.34519282915;PAX3,7:-0.353996658699;NR5A1,2:-0.366403476823;ONECUT1,2:-0.376891696794;ZFP161:-0.377688433601;MEF2{A,B,C,D}:-0.394891487933;bHLH_family:-0.396722257823;NRF1:-0.401269216148;FOXP3:-0.420033748176;PITX1..3:-0.435926965491;LEF1_TCF7_TCF7L1,2:-0.460929062227;SP1:-0.465577515066;NKX2-1,4:-0.499563363465;SNAI1..3:-0.525428940661;RFX1:-0.536216547142;FOSL2:-0.608267026416;FOX{D1,D2}:-0.631106786897;CEBPA,B_DDIT3:-0.657552241118;STAT5{A,B}:-0.671093870174;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.672828338656;FOXA2:-0.681340669687;BREu{core}:-0.685890534083;HIF1A:-0.690636137352;NKX6-1,2:-0.702689726499;NFIL3:-0.70335311354;IKZF2:-0.705826806088;NFE2:-0.72597200736;SPI1:-0.7303298163;SPIB:-0.741199901337;JUN:-0.781292402635;FOXN1:-0.784056334841;CREB1:-0.792010517223;ELK1,4_GABP{A,B1}:-0.79406426955;SOX5:-0.796939162409;PBX1:-0.801825557564;TLX2:-0.806912131298;AHR_ARNT_ARNT2:-0.818165522782;SOX{8,9,10}:-0.835988280985;ETS1,2:-0.850940137175;PAX2:-0.861666709867;SOX2:-0.864725894299;FOXP1:-0.920965237883;ESRRA:-0.940709974274;ADNP_IRX_SIX_ZHX:-0.955750539365;RFX2..5_RFXANK_RFXAP:-0.961653147071;SREBF1,2:-0.987396739855;ATF4:-0.993643611555;NFY{A,B,C}:-1.02194443297;POU1F1:-1.0393968869;TGIF1:-1.10874675304;POU2F1..3:-1.12233792029;ZEB1:-1.14833963058;FOX{I1,J2}:-1.17894569113;ELF1,2,4:-1.18820710531;PRRX1,2:-1.20954320863;PAX6:-1.21505688006;ATF5_CREB3:-1.22278191604;OCT4_SOX2{dimer}:-1.23946112031;ALX1:-1.28345790781;GATA6:-1.31349922375;RBPJ:-1.32147132114;CUX2:-1.32605460367;T:-1.40576397651;PDX1:-1.52974574447;FOX{F1,F2,J1}:-1.56696631607;ATF2:-1.5751939868;CRX:-1.576535295;MYOD1:-1.5868544728;NANOG:-1.877266695;RORA:-1.88838939154;FOXQ1:-2.01061907811
|top_motifs=UFEwm:2.95529478579;ALX4:2.75550724581;NKX2-2,8:2.53214992808;EVI1:2.45298982908;TAL1_TCF{3,4,12}:2.39713680922;HMGA1,2:2.28822733837;PAX1,9:2.17303600129;ESR1:2.1303696505;EN1,2:2.07138233052;HES1:1.84206049341;MYBL2:1.81027102434;ZNF238:1.79375227106;NR6A1:1.73292876389;GLI1..3:1.63657061507;XBP1:1.62268909658;RXRA_VDR{dimer}:1.52852089282;GZF1:1.49272566581;RXR{A,B,G}:1.47118943063;FOXL1:1.44050559278;HOX{A4,D4}:1.28575751689;NKX3-1:1.27980345962;GCM1,2:1.25871389061;TFCP2:1.24751163861;KLF4:1.21227773623;ATF6:1.19990886225;EBF1:1.18757550029;CDC5L:1.18192799756;NANOG{mouse}:1.16827180831;DBP:1.16827178617;ZNF423:1.15728423013;GFI1B:1.04877539054;NR3C1:0.971073429831;SPZ1:0.963954172314;HOX{A5,B5}:0.939253584615;HAND1,2:0.938046044608;GATA4:0.931935934757;TP53:0.930612074574;NFATC1..3:0.892742512238;TFAP4:0.885654271457;NKX3-2:0.836185815423;GTF2I:0.823488364284;AIRE:0.819710522277;ARID5B:0.807897305548;SMAD1..7,9:0.797705599743;TEAD1:0.786918779101;ZIC1..3:0.786716196149;PAX4:0.782690047611;MTF1:0.777880447019;ZNF384:0.771821422021;NR1H4:0.742185004754;GTF2A1,2:0.73759137932;FOXO1,3,4:0.73527335287;HMX1:0.734316409137;TFAP2{A,C}:0.700805904995;NFE2L1:0.675114187683;TEF:0.655863118375;HSF1,2:0.60875704639;YY1:0.59701860011;POU3F1..4:0.588413151391;MAFB:0.588082942966;PAX5:0.538538078631;RREB1:0.512249137747;MZF1:0.502201580459;PATZ1:0.49245330635;ZBTB6:0.480056027864;STAT2,4,6:0.477006888888;MTE{core}:0.4757786656;TBP:0.458397470079;MYB:0.456149906658;IRF1,2:0.44849940339;SRF:0.441846602074;TLX1..3_NFIC{dimer}:0.439386735596;PRDM1:0.400389099165;XCPE1{core}:0.378157218047;LHX3,4:0.368144932692;IKZF1:0.343697935299;CDX1,2,4:0.321723452355;NFE2L2:0.312116901124;HIC1:0.282617332623;PAX8:0.255143124445;SOX17:0.21445416935;LMO2:0.19251458348;MAZ:0.175793426518;HLF:0.173200837;ZNF148:0.168665873468;TFAP2B:0.165550914663;ZBTB16:0.157434139342;PPARG:0.113404666526;REST:0.108718186038;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.105465854018;POU6F1:0.0981819012594;FOXD3:0.0664781520215;EP300:0.00820250155585;AR:-0.0159922627452;VSX1,2:-0.0220470078285;MYFfamily:-0.0254629613012;HOX{A6,A7,B6,B7}:-0.0321999431482;HNF1A:-0.0490771001502;GFI1:-0.0618377171411;DMAP1_NCOR{1,2}_SMARC:-0.0677704528432;NHLH1,2:-0.0795438923995;POU5F1:-0.0993539813279;IRF7:-0.106674136773;BACH2:-0.111542485088;HBP1_HMGB_SSRP1_UBTF:-0.13364779149;RUNX1..3:-0.138985530804;TFDP1:-0.15108976255;TOPORS:-0.172826336341;ZNF143:-0.227159027079;BPTF:-0.242173017641;E2F1..5:-0.25103271045;EGR1..3:-0.25157256502;HOXA9_MEIS1:-0.271259109552;FOS_FOS{B,L1}_JUN{B,D}:-0.297768123586;FOXM1:-0.298266630469;NKX2-3_NKX2-5:-0.30864996858;NFIX:-0.324426606593;MED-1{core}:-0.325865352121;STAT1,3:-0.329261710998;NFKB1_REL_RELA:-0.337988879958;HNF4A_NR2F1,2:-0.34167631142;TBX4,5:-0.34519282915;PAX3,7:-0.353996658699;NR5A1,2:-0.366403476823;ONECUT1,2:-0.376891696794;ZFP161:-0.377688433601;MEF2{A,B,C,D}:-0.394891487933;bHLH_family:-0.396722257823;NRF1:-0.401269216148;FOXP3:-0.420033748176;PITX1..3:-0.435926965491;LEF1_TCF7_TCF7L1,2:-0.460929062227;SP1:-0.465577515066;NKX2-1,4:-0.499563363465;SNAI1..3:-0.525428940661;RFX1:-0.536216547142;FOSL2:-0.608267026416;FOX{D1,D2}:-0.631106786897;CEBPA,B_DDIT3:-0.657552241118;STAT5{A,B}:-0.671093870174;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.672828338656;FOXA2:-0.681340669687;BREu{core}:-0.685890534083;HIF1A:-0.690636137352;NKX6-1,2:-0.702689726499;NFIL3:-0.70335311354;IKZF2:-0.705826806088;NFE2:-0.72597200736;SPI1:-0.7303298163;SPIB:-0.741199901337;JUN:-0.781292402635;FOXN1:-0.784056334841;CREB1:-0.792010517223;ELK1,4_GABP{A,B1}:-0.79406426955;SOX5:-0.796939162409;PBX1:-0.801825557564;TLX2:-0.806912131298;AHR_ARNT_ARNT2:-0.818165522782;SOX{8,9,10}:-0.835988280985;ETS1,2:-0.850940137175;PAX2:-0.861666709867;SOX2:-0.864725894299;FOXP1:-0.920965237883;ESRRA:-0.940709974274;ADNP_IRX_SIX_ZHX:-0.955750539365;RFX2..5_RFXANK_RFXAP:-0.961653147071;SREBF1,2:-0.987396739855;ATF4:-0.993643611555;NFY{A,B,C}:-1.02194443297;POU1F1:-1.0393968869;TGIF1:-1.10874675304;POU2F1..3:-1.12233792029;ZEB1:-1.14833963058;FOX{I1,J2}:-1.17894569113;ELF1,2,4:-1.18820710531;PRRX1,2:-1.20954320863;PAX6:-1.21505688006;ATF5_CREB3:-1.22278191604;OCT4_SOX2{dimer}:-1.23946112031;ALX1:-1.28345790781;GATA6:-1.31349922375;RBPJ:-1.32147132114;CUX2:-1.32605460367;T:-1.40576397651;PDX1:-1.52974574447;FOX{F1,F2,J1}:-1.56696631607;ATF2:-1.5751939868;CRX:-1.576535295;MYOD1:-1.5868544728;NANOG:-1.877266695;RORA:-1.88838939154;FOXQ1:-2.01061907811
|xref=
}}
}}

Revision as of 22:45, 27 June 2012


Name:tenocyte, donor1
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissuetendon
dev stageNA
sexNA
ageNA
cell typetenocyte
cell lineNA
companyNA
collaborationGundula Schulze-Tanzil
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.131
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0594
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.818
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00883
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.122
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.163
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0899
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes1.078
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.469
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.581
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.137
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0.557
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0721
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0761
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.189
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.674
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0385
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0483
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.793
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.326
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.242
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal1.158
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal1.104
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.988
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.396
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic1.3
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0905
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.842
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data no result for this sample


TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12639

Jaspar motifP-value
MA0002.20.339
MA0003.10.153
MA0004.10.143
MA0006.10.159
MA0007.10.391
MA0009.10.723
MA0014.10.295
MA0017.10.687
MA0018.27.18615e-6
MA0019.10.826
MA0024.10.028
MA0025.18.19682e-5
MA0027.10.698
MA0028.16.70943e-4
MA0029.10.63
MA0030.10.04
MA0031.10.125
MA0035.20.0108
MA0038.10.0159
MA0039.20.0189
MA0040.10.914
MA0041.10.596
MA0042.10.876
MA0043.11.69978e-6
MA0046.10.125
MA0047.20.539
MA0048.10.251
MA0050.10.828
MA0051.10.807
MA0052.10.0111
MA0055.10.9
MA0057.10.218
MA0058.10.0509
MA0059.10.943
MA0060.18.05676e-8
MA0061.10.869
MA0062.21.98279e-11
MA0065.20.442
MA0066.10.254
MA0067.18.60774e-4
MA0068.10.186
MA0069.10.254
MA0070.10.534
MA0071.10.701
MA0072.10.24
MA0073.10.947
MA0074.10.0623
MA0076.15.23971e-5
MA0077.10.387
MA0078.10.731
MA0079.20.748
MA0080.22.37553e-8
MA0081.10.00455
MA0083.10.715
MA0084.10.27
MA0087.10.783
MA0088.10.848
MA0090.10.118
MA0091.10.0251
MA0092.10.317
MA0093.10.104
MA0099.22.39216e-5
MA0100.10.687
MA0101.10.049
MA0102.20.133
MA0103.10.144
MA0104.20.0681
MA0105.10.292
MA0106.10.0609
MA0107.10.0637
MA0108.20.623
MA0111.10.95
MA0112.23.23149e-4
MA0113.10.812
MA0114.10.912
MA0115.10.802
MA0116.10.0289
MA0117.10.193
MA0119.10.194
MA0122.10.285
MA0124.10.0574
MA0125.10.2
MA0131.10.0816
MA0135.10.61
MA0136.14.70391e-13
MA0137.20.673
MA0138.20.074
MA0139.10.806
MA0140.10.0469
MA0141.10.249
MA0142.10.27
MA0143.10.443
MA0144.10.846
MA0145.10.15
MA0146.10.533
MA0147.10.183
MA0148.10.781
MA0149.10.912
MA0150.10.00252
MA0152.10.0128
MA0153.10.49
MA0154.10.0978
MA0155.10.148
MA0156.11.74746e-11
MA0157.10.743
MA0159.10.714
MA0160.10.318
MA0162.10.0654
MA0163.12.18302e-4
MA0164.10.917
MA0258.10.0836
MA0259.10.11



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12639

Novel motifP-value
10.424
100.526
1000.55
1010.306
1020.237
1030.0777
1040.804
1050.114
1060.225
1070.0316
1080.301
1090.412
110.271
1100.23
1110.697
1120.553
1130.0174
1140.188
1150.0339
1160.0586
1170.985
1180.932
1190.626
120.235
1200.652
1210.48
1220.0219
1230.0165
1240.718
1250.686
1260.864
1270.822
1280.0797
1290.611
130.639
1300.536
1310.79
1320.236
1330.142
1340.635
1350.504
1360.759
1370.599
1380.744
1390.636
140.509
1400.725
1410.46
1420.779
1430.661
1440.29
1450.754
1460.987
1470.297
1480.808
1490.0169
150.786
1500.215
1510.486
1520.132
1530.986
1540.846
1550.2
1560.532
1570.349
1580.0123
1590.628
160.00627
1600.351
1610.938
1620.245
1630.871
1640.142
1650.841
1660.0452
1670.454
1680.649
1690.019
170.351
180.361
190.00191
20.2
200.333
210.0379
220.273
230.155
240.329
250.474
260.217
270.355
280.238
290.248
30.427
300.434
310.443
325.53423e-20
330.884
340.584
350.833
360.05
370.0973
380.912
390.268
40.833
400.229
410.282
420.75
430.426
440.067
450.733
460.161
470.912
480.79
490.962
50.996
500.532
510.642
520.583
530.191
540.651
550.423
560.791
570.97
580.45
590.0107
60.31
600.6
610.789
620.824
630.196
640.785
650.327
660.229
670.852
680.395
690.515
70.495
700.32
710.389
720.799
730.111
740.246
750.849
760.966
770.0389
780.544
795.70064e-5
80.0859
800.0945
810.391
820.433
830.298
840.311
850.258
860.489
870.273
880.42
890.0392
90.517
900.875
910.535
920.236
930.44
940.663
950.994
960.861
970.325
980.97
990.00177



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12639


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000499 (stromal cell)
0000630 (supportive cell)
0000134 (mesenchymal cell)
0000135 (fibrocyte)
0000386 (attachment cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0000388 (tendon cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002384 (connective tissue)
0000926 (mesoderm)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0000043 (tendon)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0002204 (musculoskeletal system)
0006603 (presumptive mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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