FF:11282-116I4: Difference between revisions

Revision as of 20:27, 9 July 2012

Name:	Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skeletal muscle
dev stage	22 weeks old fetus
sex	unknown
age	embryo 22week
cell type	skeletal muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1424
catalog number	CA150D-R10f
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.053
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0155
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0.52
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0712
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0.777
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.744
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.00813
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0902
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.196
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.132
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.52
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.183
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.192
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.037
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.676
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0385
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.00569
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.037
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.103
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00667
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0304
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0125
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.037
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.132
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.037
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.659
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.575
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.4
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.037
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.245
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0.037
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.737
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.458
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0.037
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11084

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.124
MA0003.1	MA0003.1	0.172
MA0004.1	MA0004.1	0.191
MA0006.1	MA0006.1	0.451
MA0007.1	MA0007.1	0.0467
MA0009.1	MA0009.1	0.0196
MA0014.1	MA0014.1	0.633
MA0017.1	MA0017.1	0.109
MA0018.2	MA0018.2	0.0383
MA0019.1	MA0019.1	0.0849
MA0024.1	MA0024.1	0.651
MA0025.1	MA0025.1	0.111
MA0027.1	MA0027.1	0.378
MA0028.1	MA0028.1	0.0315
MA0029.1	MA0029.1	0.413
MA0030.1	MA0030.1	0.137
MA0031.1	MA0031.1	0.018
MA0035.2	MA0035.2	0.0398
MA0038.1	MA0038.1	0.288
MA0039.2	MA0039.2	0.0762
MA0040.1	MA0040.1	0.667
MA0041.1	MA0041.1	0.534
MA0042.1	MA0042.1	0.587
MA0043.1	MA0043.1	0.0114
MA0046.1	MA0046.1	0.288
MA0047.2	MA0047.2	0.00638
MA0048.1	MA0048.1	0.00815
MA0050.1	MA0050.1	0.00113
MA0051.1	MA0051.1	0.0184
MA0052.1	MA0052.1	3.93849e-10
MA0055.1	MA0055.1	5.03024e-4
MA0057.1	MA0057.1	0.922
MA0058.1	MA0058.1	0.0942
MA0059.1	MA0059.1	0.576
MA0060.1	MA0060.1	0.854
MA0061.1	MA0061.1	4.76641e-4
MA0062.2	MA0062.2	6.44404e-8
MA0065.2	MA0065.2	0.317
MA0066.1	MA0066.1	0.489
MA0067.1	MA0067.1	0.012
MA0068.1	MA0068.1	0.0579
MA0069.1	MA0069.1	0.0587
MA0070.1	MA0070.1	0.0906
MA0071.1	MA0071.1	0.778
MA0072.1	MA0072.1	0.634
MA0073.1	MA0073.1	0.639
MA0074.1	MA0074.1	0.447
MA0076.1	MA0076.1	0.0372
MA0077.1	MA0077.1	0.378
MA0078.1	MA0078.1	0.701
MA0079.2	MA0079.2	0.925
MA0080.2	MA0080.2	7.13863e-13
MA0081.1	MA0081.1	0.00357
MA0083.1	MA0083.1	1.58161e-5
MA0084.1	MA0084.1	0.116
MA0087.1	MA0087.1	0.286
MA0088.1	MA0088.1	0.833
MA0090.1	MA0090.1	0.00193
MA0091.1	MA0091.1	1.85543e-11
MA0092.1	MA0092.1	0.706
MA0093.1	MA0093.1	0.235
MA0099.2	MA0099.2	1.88129e-4
MA0100.1	MA0100.1	0.578
MA0101.1	MA0101.1	7.2659e-5
MA0102.2	MA0102.2	0.00971
MA0103.1	MA0103.1	0.0118
MA0104.2	MA0104.2	0.165
MA0105.1	MA0105.1	0.00238
MA0106.1	MA0106.1	0.408
MA0107.1	MA0107.1	2.16562e-4
MA0108.2	MA0108.2	2.46192e-13
MA0111.1	MA0111.1	0.362
MA0112.2	MA0112.2	0.0329
MA0113.1	MA0113.1	0.224
MA0114.1	MA0114.1	0.26
MA0115.1	MA0115.1	0.302
MA0116.1	MA0116.1	0.00789
MA0117.1	MA0117.1	0.399
MA0119.1	MA0119.1	0.475
MA0122.1	MA0122.1	0.506
MA0124.1	MA0124.1	0.697
MA0125.1	MA0125.1	0.401
MA0131.1	MA0131.1	0.237
MA0135.1	MA0135.1	0.124
MA0136.1	MA0136.1	1.2546e-15
MA0137.2	MA0137.2	0.194
MA0138.2	MA0138.2	0.872
MA0139.1	MA0139.1	0.397
MA0140.1	MA0140.1	0.0629
MA0141.1	MA0141.1	0.626
MA0142.1	MA0142.1	0.138
MA0143.1	MA0143.1	0.618
MA0144.1	MA0144.1	0.11
MA0145.1	MA0145.1	0.0127
MA0146.1	MA0146.1	0.312
MA0147.1	MA0147.1	0.302
MA0148.1	MA0148.1	0.00483
MA0149.1	MA0149.1	0.0739
MA0150.1	MA0150.1	1.58935e-4
MA0152.1	MA0152.1	0.00585
MA0153.1	MA0153.1	0.531
MA0154.1	MA0154.1	0.389
MA0155.1	MA0155.1	0.0281
MA0156.1	MA0156.1	1.69171e-14
MA0157.1	MA0157.1	0.0271
MA0159.1	MA0159.1	0.672
MA0160.1	MA0160.1	0.0353
MA0162.1	MA0162.1	0.183
MA0163.1	MA0163.1	0.825
MA0164.1	MA0164.1	0.605
MA0258.1	MA0258.1	0.834
MA0259.1	MA0259.1	0.642

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11084

Novel motif	Logo	P-value
1	1	0.397
10	10	0.0288
100	100	0.946
101	101	0.651
102	102	0.616
103	103	0.195
104	104	0.374
105	105	0.819
106	106	0.232
107	107	0.252
108	108	0.437
109	109	0.32
11	11	0.794
110	110	0.705
111	111	0.669
112	112	0.225
113	113	6.19584e-5
114	114	0.576
115	115	0.982
116	116	0.234
117	117	0.154
118	118	0.0795
119	119	0.863
12	12	0.645
120	120	0.358
121	121	0.62
122	122	0.0483
123	123	1.31115e-4
124	124	0.108
125	125	0.321
126	126	0.558
127	127	0.422
128	128	0.496
129	129	0.691
13	13	0.93
130	130	0.327
131	131	0.0849
132	132	0.501
133	133	0.653
134	134	0.0643
135	135	0.963
136	136	0.0589
137	137	0.266
138	138	0.217
139	139	0.784
14	14	0.772
140	140	0.161
141	141	0.0951
142	142	0.987
143	143	0.194
144	144	0.427
145	145	0.57
146	146	0.867
147	147	0.0947
148	148	0.304
149	149	0.0417
15	15	0.11
150	150	0.902
151	151	0.837
152	152	0.218
153	153	0.365
154	154	0.484
155	155	0.00555
156	156	0.321
157	157	0.58
158	158	0.0777
159	159	0.876
16	16	0.316
160	160	0.735
161	161	0.779
162	162	0.0635
163	163	0.65
164	164	0.159
165	165	0.71
166	166	0.426
167	167	0.025
168	168	0.693
169	169	0.0248
17	17	0.971
18	18	0.932
19	19	0.0355
2	2	0.152
20	20	0.0831
21	21	0.341
22	22	0.204
23	23	0.892
24	24	0.571
25	25	0.532
26	26	0.297
27	27	0.567
28	28	0.27
29	29	0.157
3	3	0.355
30	30	0.248
31	31	0.888
32	32	1.08339e-9
33	33	0.259
34	34	0.58
35	35	0.478
36	36	0.151
37	37	0.932
38	38	0.447
39	39	0.227
4	4	0.72
40	40	0.0791
41	41	0.0729
42	42	0.401
43	43	0.558
44	44	0.818
45	45	0.577
46	46	0.991
47	47	0.546
48	48	0.746
49	49	0.393
5	5	0.832
50	50	0.439
51	51	0.829
52	52	0.881
53	53	0.656
54	54	0.801
55	55	0.857
56	56	0.876
57	57	0.605
58	58	0.168
59	59	0.597
6	6	0.833
60	60	0.513
61	61	0.47
62	62	0.555
63	63	0.9
64	64	0.508
65	65	0.818
66	66	0.585
67	67	0.823
68	68	0.799
69	69	0.904
7	7	0.742
70	70	0.351
71	71	0.118
72	72	0.197
73	73	0.594
74	74	0.417
75	75	0.251
76	76	0.0354
77	77	0.632
78	78	0.458
79	79	0.0113
8	8	0.937
80	80	0.647
81	81	0.379
82	82	0.875
83	83	0.272
84	84	0.592
85	85	0.947
86	86	0.697
87	87	0.222
88	88	0.713
89	89	0.194
9	9	0.198
90	90	0.323
91	91	0.895
92	92	0.891
93	93	0.659
94	94	0.522
95	95	0.0859
96	96	0.822
97	97	0.775
98	98	0.119
99	99	0.00294

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11084

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0104975 human myotube cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000188 (cell of skeletal muscle)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000162 (human skeletal muscle cell sample)
0104975 (human myotube cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)

@@ Line 10: / Line 10: @@
 |def="Skeletal muscle cells derived from myotubules." [GOC:tfm]
 |expression_enrichment_score=chr1:203055129..203055147,-!p1@MYOG!2.54!346.16!MYOG;;chr15:42749722..42749739,-!p2@ZFP106!2.34!376.96!ZFP106;;chr1:40105299..40105326,-!p1@HEYL!1.90!78.35!HEYL;;chr9:20382446..20382493,-!p4@MLLT3!1.79!61.25!MLLT3;;chr15:57511609..57511651,+!p2@TCF12!1.77!96.07!TCF12;;chr8:25902876..25902936,-!p1@EBF2!1.69!47.54!EBF2;;chr14:61116183..61116208,-!p1@SIX1!1.59!139.87!SIX1;;chr11:17741111..17741124,+!p1@MYOD1!1.57!36.50!MYOD1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.52!32.32!HOXC5;;chr1:170632285..170632309,+!p1@PRRX1!1.45!30.81!PRRX1;;chr7:15726296..15726315,-!p1@MEOX2!1.44!26.35!MEOX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.41!124.56!CREB3L1;;chr17:1959369..1959388,+!p2@HIC1!1.41!63.39!HIC1;;chr19:2867325..2867348,+!p1@ZNF556!1.41!24.93!ZNF556;;chr12:81110684..81110700,+!p1@MYF5!1.41!24.66!MYF5;;chr2:239148671..239148686,-!p1@HES6!1.40!86.63!HES6;;chr10:64576105..64576133,-!p1@EGR2!1.38!46.03!EGR2;;chr21:36421535..36421610,-!p2@RUNX1!1.36!77.01!RUNX1;;chr1:170633348..170633399,+!p2@PRRX1!1.34!28.13!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!1.34!20.66!PKNOX2;;chr8:72756637..72756664,-!p3@MSC!1.33!23.33!MSC;;chr16:1031762..1031781,+!p1@SOX8!1.32!19.77!SOX8;;chr19:13134772..13134822,+!p2@NFIX!1.27!25.82!NFIX;;chr8:72756667..72756736,-!p2@MSC!1.25!26.26!MSC;;chr1:151032922..151032951,+!p2@MLLT11!1.23!26.62!MLLT11;;chr5:88178983..88179012,-!p1@MEF2C!1.22!118.23!MEF2C;;chr12:54393880..54393962,+!p1@HOXC9!1.18!14.07!HOXC9;;chr1:244214577..244214593,+!p1@ZNF238!1.18!13.98!ZNF238;;chr12:125003087..125003141,-!p4@NCOR2!1.17!17.72!NCOR2;;chr10:104001259..104001274,-!p1@PITX3!1.17!13.71!PITX3;;chr4:111558135..111558198,-!p2@PITX2!1.17!13.71!PITX2;;chr1:151032860..151032918,+!p1@MLLT11!1.15!152.96!MLLT11;;chr6:45296048..45296082,+!p1@RUNX2!1.15!15.14!RUNX2;;chr12:54378923..54378966,+!p1@HOXC10!1.14!12.91!HOXC10;;chr19:50432453..50432468,+!p1@ATF5!1.13!696.85!ATF5;;chr19:45260775..45260838,+!p5@BCL3!1.13!16.38!BCL3;;chr11:17741254..17741282,+!p2@MYOD1!1.11!11.84!MYOD1;;chr2:5832508..5832524,+!p1@SOX11!1.10!11.66!SOX11;;chr7:15726243..15726293,-!p2@MEOX2!1.08!11.13!MEOX2;;chr1:119530493..119530572,-!p1@TBX15!1.05!10.15!TBX15;;chr1:170633262..170633285,+!p3@PRRX1!1.04!11.31!PRRX1;;chr11:46299539..46299620,+!p2@CREB3L1!1.03!16.65!CREB3L1;;chr2:24714729..24714761,+!p1@NCOA1!1.03!9.62!NCOA1;;chr7:27196267..27196311,-!p1@HOXA7!1.02!9.53!HOXA7;;chr11:125034605..125034636,+!p2@PKNOX2!1.00!8.90!PKNOX2;;chr5:72744594..72744609,-!p1@FOXD1!0.99!40.60!FOXD1;;chr1:170632959..170632987,+!p4@PRRX1!0.97!9.26!PRRX1;;chr17:1958388..1958404,+!p1@HIC1!0.96!53.78!HIC1;;chr18:53068911..53068935,-!p4@TCF4!0.95!8.90!TCF4;;chr10:131762504..131762555,-!p1@EBF3!0.95!8.01!EBF3;;chr12:125002827..125002855,-!p5@NCOR2!0.94!11.04!NCOR2;;chr3:25470156..25470227,+!p2@RARB!0.90!7.03!RARB;;chr2:45236540..45236577,-!p1@SIX2!0.90!6.94!SIX2;;chr7:150945754..150945789,-!p2@SMARCD3!0.89!21.81!SMARCD3;;chr1:170632723..170632739,+!p8@PRRX1!0.89!6.68!PRRX1;;chr5:134369905..134369972,-!p1@PITX1!0.88!10.24!PITX1;;chr19:49864746..49864780,-!p2@TEAD2!0.88!9.26!TEAD2;;chr1:18957333..18957375,+!p1@PAX7!0.87!6.41!PAX7;;chr2:145275947..145275981,-!p10@ZEB2!0.87!6.41!ZEB2;;chr12:3068544..3068597,+!p1@TEAD4!0.86!40.06!TEAD4;;chr8:72756063..72756125,-!p1@MSC!0.86!13.27!MSC;;chr1:165414227..165414242,-!p2@RXRG!0.86!6.32!RXRG;;chr11:125034586..125034604,+!p3@PKNOX2!0.86!6.23!PKNOX2;;chr4:111544219..111544240,-!p1@PITX2!0.86!6.23!PITX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.85!6.05!HOXC5;;chr8:80679993..80680011,-!p1@HEY1!0.84!8.90!HEY1;;chr18:22932080..22932170,-!p1@ZNF521!0.83!26.26!ZNF521;;chr12:48298765..48298783,-!p2@VDR!0.83!12.64!VDR;;chr1:23696448..23696453,-!p5@ZNF436!0.83!7.12!ZNF436;;chr12:54410948..54410992,+!p3@HOXC5!0.83!5.70!HOXC5;;chr3:52001448..52001478,-!p2@PCBP4!0.82!83.96!PCBP4;;chr14:61116168..61116180,-!p2@SIX1!0.82!6.50!SIX1;;chr1:40367668..40367684,-!p2@MYCL1!0.82!5.61!MYCL1;;chr15:57511589..57511608,+!p4@TCF12!0.82!5.61!TCF12;;chr8:25902668..25902680,-!p3@EBF2!0.81!5.52!EBF2;;chr2:176994408..176994492,+!p1@HOXD8!0.81!5.52!HOXD8;;chr22:19748231..19748317,+!p1@TBX1!0.81!5.43!TBX1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.81!5.43!PEG3;;chr12:125002739..125002756,-!p6@NCOR2!0.80!8.19!NCOR2;;chr8:72756267..72756296,-!p4@MSC!0.80!8.10!MSC;;chr12:54379029..54379057,+!p2@HOXC10!0.80!5.34!HOXC10;;chr10:104001289..104001310,-!p2@PITX3!0.80!5.25!PITX3;;chr20:30433396..30433414,-!p1@FOXS1!0.80!5.25!FOXS1;;chr11:17741084..17741094,+!p3@MYOD1!0.78!5.07!MYOD1;;chr13:73633131..73633149,+!p1@KLF5!0.77!57.96!KLF5;;chr3:141747459..141747475,-!p1@TFDP2!0.77!44.43!TFDP2;;chr8:49833948..49833973,-!p2@SNAI2!0.77!34.28!SNAI2;;chr2:145275162..145275202,-!p2@ZEB2!0.77!31.61!ZEB2;;chr20:51588873..51588953,+!p1@TSHZ2!0.77!6.59!TSHZ2;;chr4:174451370..174451387,-!p1@HAND2!0.77!4.90!HAND2;;chr1:41827095..41827155,+!p1@FOXO6!0.76!6.68!FOXO6;;chr2:119605214..119605230,-!p1@EN1!0.76!4.81!EN1;;chr16:31076273..31076288,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chr6:45295979..45295986,+!p28@RUNX2!0.19!0.53!RUNX2;;chr7:27224911..27224922,-!p5@HOXA11!0.19!0.53!HOXA11;;chr7:42276771..42276782,-!p4@GLI3!0.19!0.53!GLI3;;chr8:106331769..106331772,+!p8@ZFPM2!0.19!0.53!ZFPM2;;chr8:30890810..30890880,-!p1@PURG!0.19!0.53!PURG;;chr8:55370487..55370503,+!p1@SOX17!0.19!0.53!SOX17;;chr10:114886387..114886398,+!p36@TCF7L2!0.19!0.53!TCF7L2;;chr10:119302232..119302265,+!p1@EMX2!0.19!0.53!EMX2;;chr10:45496320..45496336,+!p3@ZNF22!0.19!0.53!ZNF22;;chr10:70320041..70320065,+!p2@TET1!0.19!0.53!TET1;;chr11:8040739..8040815,+!p4@TUB!0.19!0.53!TUB;;chr12:10871020..10871032,-!p26@CSDA!0.19!0.53!CSDA;;chr12:10871068..10871079,-!p25@CSDA!0.19!0.53!CSDA;;chr12:54379569..54379583,+!p9@HOXC5!0.19!0.53!HOXC5;;chr12:57504069..57504090,-!p7@STAT6!0.19!0.53!STAT6;;chr12:85673977..85674015,+!p1@ALX1!0.19!0.53!ALX1;;chr19:46801639..46801699,+!p1@HIF3A!0.19!0.53!HIF3A;;chr19:47910182..47910187,-!p3@MEIS3!0.19!0.53!MEIS3;;chr19:50435673..50435690,+!p8@ATF5!0.19!0.53!ATF5;;chr19:9473676..9473712,+!p2@ZNF177,p2@ZNF559-ZNF177!0.19!0.53!ZNF177;;chr1:214161328..214161348,+!p2@PROX1!0.19!0.53!PROX1;;chr20:30433431..30433442,-!p2@FOXS1!0.19!0.53!FOXS1;;chr22:29196511..29196541,-!p1@XBP1!0.18!152.24!XBP1;;chr22:29196547..29196563,-!p2@XBP1!0.18!50.04!XBP1;;chr2:145277640..145277771,-!p1@ZEB2!0.18!17.90!ZEB2;;chr12:96588143..96588185,+!p1@ELK3!0.18!15.94!ELK3;;chr12:51477368..51477386,-!p1@CSRNP2!0.18!14.42!CSRNP2;;chr16:3451184..3451264,+!p1@ZNF174!0.18!13.62!ZNF174;;chr19:1863591..1863611,-!p2@KLF16!0.18!12.55!KLF16;;chrX:128657413..128657456,-!p2@SMARCA1!0.18!11.13!SMARCA1;;chr12:6798616..6798684,-!p2@ZNF384!0.18!8.55!ZNF384;;chr17:2304365..2304388,-!p2@MNT!0.18!5.70!MNT;;chr9:116638565..116638606,+!p1@ZNF618!0.18!5.07!ZNF618;;chr17:47492252..47492265,-!p2@PHB!0.18!4.90!PHB;;chr19:9649304..9649326,-!p2@ZNF426!0.18!4.45!ZNF426;;chr19:56915668..56915732,+!p1@ZNF583!0.18!4.27!ZNF583;;chr6:28411241..28411284,-!p1@ZSCAN23!0.18!3.56!ZSCAN23;;chr19:3359257..3359362,+!p3@NFIC!0.18!3.38!NFIC;;chr19:36705547..36705597,-!p1@ZNF565!0.18!2.76!ZNF565;;chr18:56530692..56530723,+!p2@ZNF532!0.18!2.40!ZNF532;;chr3:114819124..114819200,-!p3@ZBTB20!0.18!2.40!ZBTB20;;chr5:139487608..139487663,+!p3@PURA!0.18!2.14!PURA;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.18!2.14!SOHLH2;;chr5:150284532..150284549,-!p1@ZNF300!0.18!2.05!ZNF300;;chr5:76383070..76383117,-!p3@ZBED3!0.18!1.96!ZBED3;;chr12:66218183..66218209,+!p4@HMGA2!0.18!1.78!HMGA2;;chr1:33721873..33721898,+!p3@ZNF362!0.18!1.78!ZNF362;;chrX:101975619..101975641,+!p2@BHLHB9!0.18!1.60!BHLHB9;;chr20:50808252..50808264,-!p4@ZFP64!0.18!1.51!ZFP64;;chr3:71114115..71114126,-!p14@FOXP1!0.18!1.51!FOXP1;;chr3:168864315..168864339,-!p2@MECOM!0.18!1.42!MECOM;;chr18:52989081..52989117,-!p7@TCF4!0.18!1.25!TCF4;;chr19:58987786..58987805,+!p3@ZNF446!0.18!1.16!ZNF446;;chr10:63809090..63809097,+!p7@ARID5B!0.18!1.07!ARID5B;;chr10:114710083..114710092,+!p8@TCF7L2!0.18!0.98!TCF7L2;;chr16:30569801..30569845,-!p4@ZNF764!0.18!0.98!ZNF764;;chr11:707063..707088,-!p4@DEAF1!0.18!0.89!DEAF1;;chr6:21597431..21597447,+!p8@SOX4!0.18!0.89!SOX4;;chr5:124082580..124082603,-!p4@ZNF608!0.18!0.71!ZNF608;;chr4:57522166..57522260,-!p2@HOPX!0.18!0.71!HOPX;;chr10:44144219..44144230,-!p5@ZNF32!0.18!0.62!ZNF32;;chr1:226595741..226595818,-!p1@PARP1!0.17!68.55!PARP1;;chr19:44123734..44123796,-!p1@ZNF428!0.17!49.23!ZNF428;;chr20:42295745..42295765,+!p1@MYBL2!0.17!21.10!MYBL2;;chr19:17356697..17356762,-!p1@NR2F6!0.17!17.54!NR2F6;;
+|ffid_belonging_in_development=CL:0000355,CL:0000222
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11282-116I4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:27, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0