FF:11365-117I6: Difference between revisions

Revision as of 20:46, 9 July 2012

Name:	Smooth Muscle Cells - Pulmonary Artery, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	pulmonary artery
dev stage	41 years old adult
sex	female
age	41
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1346
catalog number	CA352-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.00518
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.208
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.241
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.303
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.113
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.494
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.699
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.831
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.393
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.128
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.513
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.642
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.391
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.642
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.642
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.772
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11989

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.716
MA0003.1	MA0003.1	0.267
MA0004.1	MA0004.1	0.648
MA0006.1	MA0006.1	0.194
MA0007.1	MA0007.1	0.114
MA0009.1	MA0009.1	0.439
MA0014.1	MA0014.1	0.862
MA0017.1	MA0017.1	0.879
MA0018.2	MA0018.2	4.69563e-6
MA0019.1	MA0019.1	0.734
MA0024.1	MA0024.1	0.00227
MA0025.1	MA0025.1	0.027
MA0027.1	MA0027.1	0.655
MA0028.1	MA0028.1	8.51221e-5
MA0029.1	MA0029.1	0.274
MA0030.1	MA0030.1	0.0611
MA0031.1	MA0031.1	0.0489
MA0035.2	MA0035.2	0.368
MA0038.1	MA0038.1	0.025
MA0039.2	MA0039.2	0.357
MA0040.1	MA0040.1	0.52
MA0041.1	MA0041.1	0.474
MA0042.1	MA0042.1	0.838
MA0043.1	MA0043.1	1.54241e-5
MA0046.1	MA0046.1	0.459
MA0047.2	MA0047.2	0.735
MA0048.1	MA0048.1	0.56
MA0050.1	MA0050.1	0.827
MA0051.1	MA0051.1	0.886
MA0052.1	MA0052.1	0.531
MA0055.1	MA0055.1	0.755
MA0057.1	MA0057.1	0.0785
MA0058.1	MA0058.1	0.344
MA0059.1	MA0059.1	0.821
MA0060.1	MA0060.1	3.50974e-4
MA0061.1	MA0061.1	0.848
MA0062.2	MA0062.2	1.01147e-10
MA0065.2	MA0065.2	0.374
MA0066.1	MA0066.1	0.766
MA0067.1	MA0067.1	0.0367
MA0068.1	MA0068.1	0.851
MA0069.1	MA0069.1	0.758
MA0070.1	MA0070.1	0.974
MA0071.1	MA0071.1	0.528
MA0072.1	MA0072.1	0.938
MA0073.1	MA0073.1	0.967
MA0074.1	MA0074.1	0.153
MA0076.1	MA0076.1	1.12091e-5
MA0077.1	MA0077.1	0.579
MA0078.1	MA0078.1	0.361
MA0079.2	MA0079.2	0.87
MA0080.2	MA0080.2	2.42816e-7
MA0081.1	MA0081.1	0.0058
MA0083.1	MA0083.1	0.031
MA0084.1	MA0084.1	0.415
MA0087.1	MA0087.1	0.516
MA0088.1	MA0088.1	0.509
MA0090.1	MA0090.1	0.038
MA0091.1	MA0091.1	0.0894
MA0092.1	MA0092.1	0.119
MA0093.1	MA0093.1	0.504
MA0099.2	MA0099.2	0.0114
MA0100.1	MA0100.1	0.0955
MA0101.1	MA0101.1	0.155
MA0102.2	MA0102.2	0.305
MA0103.1	MA0103.1	0.502
MA0104.2	MA0104.2	0.243
MA0105.1	MA0105.1	0.326
MA0106.1	MA0106.1	0.179
MA0107.1	MA0107.1	0.392
MA0108.2	MA0108.2	0.00613
MA0111.1	MA0111.1	0.385
MA0112.2	MA0112.2	0.00541
MA0113.1	MA0113.1	0.325
MA0114.1	MA0114.1	0.936
MA0115.1	MA0115.1	0.974
MA0116.1	MA0116.1	0.0915
MA0117.1	MA0117.1	0.174
MA0119.1	MA0119.1	0.153
MA0122.1	MA0122.1	0.997
MA0124.1	MA0124.1	0.225
MA0125.1	MA0125.1	0.465
MA0131.1	MA0131.1	0.076
MA0135.1	MA0135.1	0.259
MA0136.1	MA0136.1	4.31726e-11
MA0137.2	MA0137.2	0.932
MA0138.2	MA0138.2	0.537
MA0139.1	MA0139.1	0.963
MA0140.1	MA0140.1	0.252
MA0141.1	MA0141.1	0.223
MA0142.1	MA0142.1	0.525
MA0143.1	MA0143.1	0.38
MA0144.1	MA0144.1	0.502
MA0145.1	MA0145.1	0.175
MA0146.1	MA0146.1	0.174
MA0147.1	MA0147.1	0.537
MA0148.1	MA0148.1	0.451
MA0149.1	MA0149.1	0.726
MA0150.1	MA0150.1	0.959
MA0152.1	MA0152.1	0.00814
MA0153.1	MA0153.1	0.173
MA0154.1	MA0154.1	0.181
MA0155.1	MA0155.1	0.0664
MA0156.1	MA0156.1	7.36409e-6
MA0157.1	MA0157.1	0.977
MA0159.1	MA0159.1	0.48
MA0160.1	MA0160.1	0.83
MA0162.1	MA0162.1	0.166
MA0163.1	MA0163.1	0.0184
MA0164.1	MA0164.1	0.705
MA0258.1	MA0258.1	0.105
MA0259.1	MA0259.1	0.497

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11989

Novel motif	Logo	P-value
1	1	0.665
10	10	0.868
100	100	0.884
101	101	0.824
102	102	0.648
103	103	0.294
104	104	0.583
105	105	0.918
106	106	0.0229
107	107	0.0165
108	108	0.472
109	109	0.272
11	11	0.159
110	110	0.305
111	111	0.647
112	112	0.407
113	113	0.115
114	114	0.195
115	115	0.203
116	116	0.0462
117	117	0.937
118	118	0.739
119	119	0.45
12	12	0.795
120	120	0.755
121	121	0.837
122	122	0.218
123	123	0.141
124	124	0.6
125	125	0.872
126	126	0.597
127	127	0.709
128	128	0.0557
129	129	0.974
13	13	0.416
130	130	0.211
131	131	0.626
132	132	0.394
133	133	0.399
134	134	0.903
135	135	0.357
136	136	0.653
137	137	0.615
138	138	0.444
139	139	0.263
14	14	0.728
140	140	0.535
141	141	0.472
142	142	0.234
143	143	0.268
144	144	0.209
145	145	0.0965
146	146	0.182
147	147	0.206
148	148	0.892
149	149	0.0527
15	15	0.998
150	150	0.339
151	151	0.479
152	152	0.0534
153	153	0.648
154	154	0.756
155	155	0.0331
156	156	0.426
157	157	0.621
158	158	0.0145
159	159	0.276
16	16	0.0582
160	160	0.0747
161	161	0.718
162	162	0.151
163	163	0.995
164	164	0.501
165	165	0.995
166	166	0.469
167	167	0.719
168	168	0.488
169	169	0.0433
17	17	0.184
18	18	0.0992
19	19	0.0571
2	2	0.162
20	20	0.264
21	21	0.33
22	22	0.121
23	23	0.104
24	24	0.775
25	25	0.168
26	26	0.0143
27	27	0.135
28	28	0.22
29	29	0.849
3	3	0.544
30	30	0.165
31	31	0.419
32	32	6.46538e-9
33	33	0.821
34	34	0.343
35	35	0.702
36	36	0.126
37	37	0.325
38	38	0.739
39	39	0.172
4	4	0.931
40	40	0.755
41	41	0.988
42	42	0.832
43	43	0.217
44	44	0.434
45	45	0.355
46	46	0.0904
47	47	0.667
48	48	0.303
49	49	0.372
5	5	0.688
50	50	0.455
51	51	0.323
52	52	0.53
53	53	0.467
54	54	0.4
55	55	0.0896
56	56	0.508
57	57	0.813
58	58	0.562
59	59	0.0282
6	6	0.826
60	60	0.405
61	61	0.409
62	62	0.846
63	63	0.236
64	64	0.507
65	65	0.139
66	66	0.401
67	67	0.652
68	68	0.155
69	69	0.401
7	7	0.513
70	70	0.00742
71	71	0.263
72	72	0.876
73	73	0.0827
74	74	0.562
75	75	0.7
76	76	0.608
77	77	0.0236
78	78	0.406
79	79	0.00497
8	8	0.0374
80	80	0.387
81	81	0.405
82	82	0.657
83	83	0.688
84	84	0.712
85	85	0.0224
86	86	0.825
87	87	0.212
88	88	0.183
89	89	0.0577
9	9	0.292
90	90	0.877
91	91	0.275
92	92	0.166
93	93	0.943
94	94	0.822
95	95	0.623
96	96	0.771
97	97	0.493
98	98	0.766
99	99	0.00449

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11989

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000174 human smooth muscle cell of pulmonary artery sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002591 (smooth muscle cell of the pulmonary artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0010371 (ecto-epithelium)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0000078 (mixed ectoderm/mesoderm/endoderm-derived structure)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0002012 (pulmonary artery)
0004535 (cardiovascular system)
0004572 (arterial system)
0004537 (blood vasculature)
0008886 (pulmonary vascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000174 (human smooth muscle cell of pulmonary artery sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.87!73.46!SOX17;;chr2:19558373..19558392,-!p1@OSR1!1.86!188.72!OSR1;;chr9:132427972..132428056,+!p1@PRRX2!1.66!57.63!PRRX2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.58!37.29!ZBED1;;chr2:239756671..239756732,+!p1@TWIST2!1.56!110.75!TWIST2;;chr1:170633348..170633399,+!p2@PRRX1!1.56!47.46!PRRX1;;chr1:170632285..170632309,+!p1@PRRX1!1.48!32.77!PRRX1;;chr15:67430351..67430366,+!p10@SMAD3!1.48!29.38!SMAD3;;chr11:46299199..46299233,+!p1@CREB3L1!1.45!134.48!CREB3L1;;chr6:34204921..34204939,+!p3@HMGA1!1.44!767.33!HMGA1;;chr17:1959369..1959388,+!p2@HIC1!1.44!67.80!HIC1;;chr11:46299539..46299620,+!p2@CREB3L1!1.44!44.07!CREB3L1;;chr9:132427883..132427951,+!p2@PRRX2!1.43!25.99!PRRX2;;chr14:29235961..29236008,+!p1@FOXG1!1.39!23.73!FOXG1;;chr19:13134772..13134822,+!p2@NFIX!1.38!33.90!NFIX;;chr18:19749386..19749404,+!p2@GATA6!1.38!32.77!GATA6;;chr1:170633058..170633084,+!p5@PRRX1!1.35!21.47!PRRX1;;chr4:174450089..174450153,-!p2@HAND2!1.33!20.34!HAND2;;chr11:65687362..65687436,+!p3@DRAP1!1.32!88.15!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!1.30!21.47!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!1.23!15.82!TCF21;;chr4:174451370..174451387,-!p1@HAND2!1.20!14.69!HAND2;;chr18:19749541..19749557,+!p1@GATA6!1.17!42.94!GATA6;;chr11:65686802..65686818,+!p6@DRAP1!1.12!21.47!DRAP1;;chr2:239756739..239756755,+!p2@TWIST2!1.11!20.34!TWIST2;;chr19:47523058..47523114,+!p1@NPAS1!1.09!11.30!NPAS1;;chr14:29234581..29234601,+!p2@FOXG1!1.09!11.30!FOXG1;;chr19:13134457..13134462,+!p5@NFIX!1.07!19.21!NFIX;;chr12:53614115..53614154,-!p1@RARG!1.06!56.50!RARG;;chr15:67430381..67430396,+!p21@SMAD3!1.05!10.17!SMAD3;;chr3:25470156..25470227,+!p2@RARB!1.05!10.17!RARB;;chr11:46299443..46299459,+!p4@CREB3L1!1.00!9.04!CREB3L1;;chr7:27183291..27183324,-!p1@HOXA5!1.00!9.04!HOXA5;;chr7:19157248..19157268,-!p1@TWIST1!0.97!23.73!TWIST1;;chr17:7492684..7492778,-!p2@SOX15!0.95!16.95!SOX15;;chr19:13135386..13135435,+!p4@NFIX!0.95!7.91!NFIX;;chr19:46801639..46801699,+!p1@HIF3A!0.95!7.91!HIF3A;;chr1:170632137..170632172,+!p10@PRRX1!0.95!7.91!PRRX1;;chr6:34204672..34204692,+!p1@HMGA1!0.94!901.80!HMGA1;;chr17:1958388..1958404,+!p1@HIC1!0.94!50.85!HIC1;;chr19:13106214..13106382,+!p1@NFIX!0.92!177.42!NFIX;;chr7:19157043..19157088,-!p2@TWIST1!0.92!19.21!TWIST1;;chr11:65687158..65687216,+!p4@DRAP1!0.91!42.94!DRAP1;;chr14:24837368..24837401,+!p1@NFATC4!0.90!16.95!NFATC4;;chr19:13136130..13136165,+!p6@NFIX!0.89!9.04!NFIX;;chr7:27142290..27142310,-!p1@HOXA2!0.89!6.78!HOXA2;;chr7:27183263..27183284,-!p2@HOXA5!0.89!6.78!HOXA5;;chr1:170632115..170632136,+!p9@PRRX1!0.89!6.78!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.89!6.78!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.89!6.78!PRRX1;;chr10:131762504..131762555,-!p1@EBF3!0.89!6.78!EBF3;;chr14:29236269..29236285,+!p3@FOXG1!0.89!6.78!FOXG1;;chr2:66662281..66662308,+!p1@MEIS1!0.88!23.73!MEIS1;;chr20:42543441..42543497,+!p1@TOX2!0.86!29.38!TOX2;;chr15:96876966..96877017,+!p12@NR2F2!0.85!9.04!NR2F2;;chr11:65687222..65687240,+!p7@DRAP1!0.85!7.91!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!0.85!6.78!PRRX1;;chr16:86600426..86600441,+!p1@FOXC2!0.82!14.69!FOXC2;;chr9:16870710..16870763,-!p1@BNC2!0.82!10.17!BNC2;;chr8:72756667..72756736,-!p2@MSC!0.82!9.04!MSC;;chr7:1577899..1577943,+!p3@MAFK!0.82!5.65!MAFK;;chr9:16705069..16705086,-!p3@BNC2!0.82!5.65!BNC2;;chr12:54447637..54447659,+!p4@HOXC4!0.82!5.65!HOXC4;;chr1:170632647..170632659,+!p17@PRRX1!0.82!5.65!PRRX1;;chr16:31076332..31076388,-!p3@ZNF668!0.82!5.65!ZNF668;;chr16:86600870..86600921,+!p2@FOXC2!0.82!5.65!FOXC2;;chr17:46671108..46671147,-!p1@HOXB5!0.82!5.65!HOXB5;;chr2:119604456..119604501,-!p2@EN1!0.82!5.65!EN1;;chr7:44143925..44143970,+!p1@AEBP1!0.81!131.09!AEBP1;;chr2:66662249..66662267,+!p2@MEIS1!0.81!22.60!MEIS1;;chr11:8102846..8102892,+!p1@TUB!0.81!7.91!TUB;;chr17:46622070..46622109,-!p1@HOXB2!0.80!12.43!HOXB2;;chr12:66218255..66218304,+!p3@HMGA2!0.79!14.69!HMGA2;;chr9:110251836..110251887,-!p4@KLF4!0.78!6.78!KLF4;;chr19:45260775..45260838,+!p5@BCL3!0.78!6.78!BCL3;;chr11:46299186..46299195,+!p3@CREB3L1!0.78!5.65!CREB3L1;;chr16:88519743..88519754,+!p2@ZFPM1!0.78!5.65!ZFPM1;;chr20:42543506..42543549,+!p2@TOX2!0.77!12.43!TOX2;;chr11:615570..615721,-!p2@IRF7!0.77!10.17!IRF7;;chr18:19749517..19749531,+!p3@GATA6!0.76!9.04!GATA6;;chr17:3571887..3571918,-!p2@TAX1BP3!0.75!57.63!TAX1BP3;;chr3:128206762..128206781,-!p2@GATA2!0.75!31.64!GATA2;;chr11:65686732..65686756,+!p2@DRAP1!0.75!21.47!DRAP1;;chr19:44037546..44037594,+!p1@ZNF575!0.75!10.17!ZNF575;;chr1:23696308..23696339,-!p2@ZNF436!0.74!10.17!ZNF436;;chr12:66218212..66218244,+!p5@HMGA2!0.74!6.78!HMGA2;;chr2:19558327..19558334,-!p2@OSR1!0.74!4.52!OSR1;;chr2:45236540..45236577,-!p1@SIX2!0.74!4.52!SIX2;;chr3:25469815..25469866,+!p3@RARB!0.74!4.52!RARB;;chr17:46659728..46659749,-!p3@HOXB3!0.74!4.52!HOXB3;;chr19:13136057..13136085,+!p11@NFIX!0.74!4.52!NFIX;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.52!PRRX1;;chr1:170633100..170633112,+!p19@PRRX1!0.74!4.52!PRRX1;;chr7:27170042..27170064,-!p4@HOXA4!0.74!4.52!HOXA4;;chr16:86544113..86544145,+!p1@FOXF1!0.73!5.65!FOXF1;;chr6:34204973..34204990,+!p4@HMGA1!0.72!64.41!HMGA1;;chr12:124873357..124873401,-!p1@NCOR2!0.72!55.37!NCOR2;;chr11:65667884..65667895,-!p2@FOSL1!0.72!18.08!FOSL1;;chr17:41622765..41622821,-!p2@ETV4!0.72!6.78!ETV4;;chr7:44143997..44144008,+!p3@AEBP1!0.72!5.65!AEBP1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.72!4.52!GLIS1;;chr4:81118647..81118666,+!p1@PRDM8!0.71!5.65!PRDM8;;chr5:158526459..158526481,-!p2@EBF1!0.71!5.65!EBF1;;chr16:88519669..88519726,+!p1@ZFPM1!0.70!40.68!ZFPM1;;chr11:65686952..65686975,+!p5@DRAP1!0.70!24.86!DRAP1;;chr7:44143978..44143989,+!p2@AEBP1!0.70!7.91!AEBP1;;chr18:3449821..3449860,+!p7@TGIF1!0.70!7.91!TGIF1;;chr7:14029283..14029311,-!p1@ETV1!0.69!23.73!ETV1;;chr15:37392724..37392757,-!p1@MEIS2!0.69!20.34!MEIS2;;chr6:1389789..1389821,+!p1@FOXF2!0.69!5.65!FOXF2;;chr18:53068911..53068935,-!p4@TCF4!0.69!4.52!TCF4;;chr19:45251943..45252006,+!p1@BCL3!0.68!114.14!BCL3;;chr14:73360799..73360817,-!p1@DPF3!0.68!14.69!DPF3;;chr5:72744445..72744466,-!p2@FOXD1!0.68!6.78!FOXD1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.67!302.86!TAX1BP3;;chr11:65667846..65667868,-!p1@FOSL1!0.67!111.88!FOSL1;;chr8:37553292..37553317,+!p1@ZNF703!0.67!100.58!ZNF703;;chr12:66218598..66218645,+!p2@HMGA2!0.67!19.21!HMGA2;;chr5:158526917..158526932,-!p1@EBF1!0.67!10.17!EBF1;;chr17:59477197..59477212,+!p2@TBX2!0.67!6.78!TBX2;;chr19:58987786..58987805,+!p3@ZNF446!0.67!5.65!ZNF446;;chr20:6748325..6748352,+!p1@BMP2!0.67!5.65!BMP2;;chr10:94449703..94449718,+!p1@HHEX!0.66!15.82!HHEX;;chr1:158969752..158969780,+!p6@IFI16!0.66!6.78!IFI16;;chr19:3366625..3366629,+!p4@NFIC!0.66!5.65!NFIC;;chr9:16870659..16870675,-!p2@BNC2!0.66!4.52!BNC2;;chr7:14029312..14029325,-!p4@ETV1!0.66!4.52!ETV1;;chr4:81104985..81105005,+!p4@PRDM8!0.66!4.52!PRDM8;;chr6:34205372..34205412,+!p5@HMGA1!0.65!20.34!HMGA1;;chr14:61116183..61116208,-!p1@SIX1!0.64!14.69!SIX1;;chr5:139487608..139487663,+!p3@PURA!0.64!7.91!PURA;;chr7:27169801..27169844,-!p2@HOXA4!0.64!3.39!HOXA4;;chr8:22550530..22550609,-!p2@EGR3!0.64!3.39!EGR3;;chr8:25902876..25902936,-!p1@EBF2!0.64!3.39!EBF2;;chr10:131762410..131762436,-!p2@EBF3!0.64!3.39!EBF3;;chr10:64578528..64578542,-!p5@EGR2!0.64!3.39!EGR2;;chr11:32457103..32457123,-!p3@WT1!0.64!3.39!WT1;;chr13:45150455..45150472,-!p8@TSC22D1!0.64!3.39!TSC22D1;;chr14:29234870..29234930,+!p7@FOXG1!0.64!3.39!FOXG1;;chr16:86601088..86601105,+!p5@FOXC2!0.64!3.39!FOXC2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.64!3.39!SEBOX;;chr17:41622731..41622764,-!p5@ETV4!0.64!3.39!ETV4;;chr18:19749353..19749367,+!p4@GATA6!0.64!3.39!GATA6;;chr19:13135582..13135600,+!p3@NFIX!0.64!3.39!NFIX;;chr1:170633225..170633230,+!p25@PRRX1!0.64!3.39!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.64!3.39!PRRX1;;chr1:221054853..221054873,+!p9@HLX!0.64!3.39!HLX;;chr2:85981107..85981120,+!p3@ATOH8!0.64!3.39!ATOH8;;chr3:21792682..21792720,-!p1@ZNF385D!0.64!3.39!ZNF385D;;chr4:121843402..121843416,+!p4@PRDM5!0.64!3.39!PRDM5;;chr19:50432453..50432468,+!p1@ATF5!0.63!216.98!ATF5;;chr1:8934931..8934947,-!p4@ENO1!0.63!12.43!ENO1;;chr19:47922750..47922795,-!p1@MEIS3!0.62!5.65!MEIS3;;chr2:121493492..121493537,+!p2@GLI2!0.62!5.65!GLI2;;chr2:74730430..74730451,-!p1@LBX2!0.62!5.65!LBX2;;chr11:65687243..65687276,+!p8@DRAP1!0.62!4.52!DRAP1;;chr5:174151553..174151610,+!p1@MSX2!0.61!5.65!MSX2;;chr6:1610293..1610310,+!p1@FOXC1!0.61!5.65!FOXC1;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.61!5.65!MEIS3P1;;chr8:106330656..106330684,+!p1@ZFPM2!0.60!9.04!ZFPM2;;chr3:71007770..71007789,-!p9@FOXP1!0.60!9.04!FOXP1;;chr1:221053049..221053075,+!p3@HLX!0.60!5.65!HLX;;chr12:125002827..125002855,-!p5@NCOR2!0.60!4.52!NCOR2;;chr18:3452133..3452150,+!p19@TGIF1!0.60!3.39!TGIF1;;chr1:164528410..164528428,+!p1@PBX1!0.59!25.99!PBX1;;chr9:35732647..35732678,+!p2@CREB3!0.59!19.21!CREB3;;chr12:54772960..54773015,-!p3@ZNF385A!0.59!16.95!ZNF385A;;chr17:46621937..46621966,-!p2@HOXB2!0.59!9.04!HOXB2;;chr10:64576105..64576133,-!p1@EGR2!0.59!6.78!EGR2;;chr16:8962202..8962222,-!p3@CARHSP1!0.59!5.65!CARHSP1;;chr3:25469724..25469773,+!p1@RARB!0.59!4.52!RARB;;chr7:44143738..44143760,+!p4@AEBP1!0.59!3.39!AEBP1;;chr8:72756637..72756664,-!p3@MSC!0.59!3.39!MSC;;chr8:48650715..48650735,-!p1@CEBPD!0.58!444.12!CEBPD;;chr17:59477233..59477263,+!p1@TBX2!0.58!10.17!TBX2;;chr9:14083467..14083483,-!p4@NFIB!0.58!7.91!NFIB;;chr2:200323414..200323455,-!p1@SATB2!0.58!6.78!SATB2;;chr6:85474299..85474324,-!p1@TBX18!0.58!5.65!TBX18;;chr17:46675420..46675465,-!p3@HOXB6!0.58!3.39!HOXB6;;chr4:81104958..81104981,+!p5@PRDM8!0.58!3.39!PRDM8;;chr4:81105027..81105039,+!p3@PRDM8!0.58!3.39!PRDM8;;chr17:38256822..38256851,-!p1@NR1D1!0.57!25.99!NR1D1;;chr3:52001426..52001447,-!p3@PCBP4!0.57!9.04!PCBP4;;chr10:77161133..77161176,-!p3@ZNF503!0.57!6.78!ZNF503;;chr17:46622114..46622138,-!p4@HOXB2!0.57!4.52!HOXB2;;chr19:56111614..56111634,+!p3@ZNF524!0.57!4.52!ZNF524;;chr1:221052994..221053008,+!p6@HLX!0.57!3.39!HLX;;chr6:34204642..342046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chr15:43663214..43663261,-!p@chr15:43663214..43663261,-!0.22!7.91!ZSCAN29;;chr17:38219143..38219154,+!p2@THRA!0.22!4.52!THRA;;chr7:148892557..148892580,+!p4@ZNF282!0.22!3.39!ZNF282;;chr1:8483756..8483809,-!p5@RERE!0.22!3.39!RERE;;chr1:61547781..61547809,+!p5@NFIA!0.22!2.26!NFIA;;chr9:73028387..73028418,-!p4@KLF9!0.22!2.26!KLF9;;chr8:145159324..145159333,+!p5@MAF1!0.22!2.26!MAF1;;chr8:72756063..72756125,-!p1@MSC!0.22!2.26!MSC;;chr16:29818132..29818144,+!p12@MAZ!0.22!2.26!MAZ;;chr17:2304226..2304239,-!p3@MNT!0.22!2.26!MNT;;chr18:47814186..47814232,-!p2@CXXC1!0.22!2.26!CXXC1;;chr17:46621311..46621332,-!p8@HOXB2!0.22!1.13!HOXB2;;chr19:24216201..24216212,+!p4@ZNF254!0.22!1.13!ZNF254;;chr1:211432872..211432883,+!p7@RCOR3!0.22!1.13!RCOR3;;chr21:36231861..36231877,-!p12@RUNX1!0.22!1.13!RUNX1;;chr11:6947720..6947812,+!p1@ZNF215!0.22!1.13!ZNF215;;chr12:72056773..72056796,+!p3@THAP2!0.22!1.13!THAP2;;chr14:24025106..24025172,-!p2@ZFHX2!0.22!1.13!ZFHX2;;chr22:29196030..29196075,-!p5@XBP1!0.22!1.13!XBP1;;chr2:148779187..148779222,+!p5@MBD5!0.22!1.13!MBD5;;chr2:176033066..176033087,-!p2@ATF2!0.22!1.13!ATF2;;chr4:87928085..87928097,+!p17@AFF1!0.22!1.13!AFF1;;chr5:142783365..142783379,-!p10@NR3C1!0.22!1.13!NR3C1;;chrX:66763815..66763854,+!p2@AR!0.22!1.13!AR;;chr12:7079807..7079848,-!p1@PHB2!0.21!265.57!PHB2;;chr7:139762641..139762768,-!p1@PARP12!0.21!19.21!PARP12;;chr9:14314566..14314618,-!p1@NFIB!0.21!16.95!NFIB;;chr16:29817617..29817664,+!p4@MAZ!0.21!14.69!MAZ;;chr6:43139153..43139232,+!p1@SRF!0.21!13.56!SRF;;chr19:55987963..55987996,+!p1@ZNF628!0.21!10.17!ZNF628;;chr1:27022164..27022220,+!p2@ARID1A!0.21!10.17!ARID1A;;chr20:42295713..42295738,+!p2@MYBL2!0.21!7.91!MYBL2;;chr11:62521614..62521646,-!p1@ZBTB3!0.21!6.78!ZBTB3;;chr19:2819854..2819891,+!p1@ZNF554!0.21!4.52!ZNF554;;chr12:53856284..53856299,+!p3@PCBP2!0.21!3.39!PCBP2;;chr11:47270436..47270464,+!p2@NR1H3!0.21!2.26!NR1H3;;chr6:151712732..151712763,-!p3@ZBTB2!0.21!2.26!ZBTB2;;chr1:211433151..211433191,+!p5@RCOR3!0.21!2.26!RCOR3;;chr1:6640110..6640130,+!p2@ZBTB48!0.21!1.13!ZBTB48;;chr1:8926369..8926385,-!p12@ENO1!0.21!1.13!ENO1;;chr20:33413523..33413534,-!p3@NCOA6!0.21!1.13!NCOA6;;chr20:44600199..44600219,-!p3@ZNF335!0.21!1.13!ZNF335;;chr20:62680984..62680999,-!p1@SOX18!0.21!1.13!SOX18;;chr11:12696071..12696086,+!p3@TEAD1!0.21!1.13!TEAD1;;chr11:57103283..57103290,-!p3@SSRP1!0.21!1.13!SSRP1;;chr12:133706975..133707013,-!p3@ZNF891!0.21!1.13!ZNF891;;chr12:72056800..72056834,+!p1@THAP2!0.21!1.13!THAP2;;chr15:80696703..80696754,+!p1@ARNT2!0.21!1.13!ARNT2;;chr16:30569801..30569845,-!p4@ZNF764!0.21!1.13!ZNF764;;chr16:31085961..31086009,+!p2@ZNF646!0.21!1.13!ZNF646;;chr16:3930724..3930735,-!p2@CREBBP!0.21!1.13!CREBBP;;chr17:36873780..36873800,+!p5@MLLT6!0.21!1.13!MLLT6;;chr17:38256858..38256866,-!p6@NR1D1!0.21!1.13!NR1D1;;chr17:42295897..42295953,-!p10@UBTF!0.21!1.13!UBTF;;chr18:3449330..3449344,+!p10@TGIF1!0.21!1.13!TGIF1;;chr6:21597283..21597312,+!p7@SOX4!0.21!1.13!SOX4;;chr2:46602901..46602926,+!p7@EPAS1!0.21!1.13!EPAS1;;chr4:1873216..1873238,+!p5@WHSC1!0.21!1.13!WHSC1;;chr17:46126136..46126152,+!p1@NFE2L1!0.20!73.46!NFE2L1;;chr19:6424783..6424802,-!p2@KHSRP!0.20!28.25!KHSRP;;chr19:8579030..8579061,-!p1@ZNF414!0.20!22.60!ZNF414;;
+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11365-117I6: Difference between revisions

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Revision as of 20:46, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0