FFCP PHASE1:Mm9::chr5:123582586..123582615,-: Difference between revisions
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|id=chr5:123582586..123582615,- | |id=chr5:123582586..123582615,- | ||
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|ontology_enrichment_celltype_v019_2=CL:0000791,3.74e-25,9;CL:0000789,3.74e-25,9;CL:0002420,3.74e-25,9;CL:0002419,3.74e-25,9;CL:0000790,3.74e-25,9;CL:0000624,1.81e-22,8;CL:0000084,2.84e-20,11;CL:0000827,2.84e-20,11;CL:0000838,1.92e-18,12;CL:0000893,4.19e-17,6;CL:0002489,4.19e-17,6;CL:0000898,4.19e-17,6;CL:0000809,4.19e-17,6;CL:0000810,4.19e-17,6;CL:0000895,4.19e-17,6;CL:0000808,4.19e-17,6;CL:0000894,4.19e-17,6;CL:0000806,4.19e-17,6;CL:0000807,4.19e-17,6;CL:0000805,4.19e-17,6;CL:0002425,4.19e-17,6;CL:0002436,4.19e-17,6;CL:0002427,4.19e-17,6;CL:0002428,4.19e-17,6;CL:0002429,4.19e-17,6;CL:0002433,4.19e-17,6;CL:0002431,4.19e-17,6;CL:0002432,4.19e-17,6;CL:0000542,6.80e-17,13;CL:0000051,6.80e-17,13;CL:0000738,1.61e-12,17;CL:0002087,1.61e-12,17;CL:0002031,5.59e-08,25;CL:0000988,3.65e-07,32;CL:0002032,3.65e-07,32;CL:0000037,3.65e-07,32;CL:0000837,3.65e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0.454999239389536,0,0,0,0,3.87369970324729,18.4433226018683,22.9383235795554,1.71217968225505,1.83475965689274,2.22560948910567,4.54586092578786,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0.42438965179803,0.340173160604279,0.0992909512008853,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,2.90144856804538,3.02484419228218,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.420649922702764,1.71390590642282,1.10434270475807,0.489963196859816,0.191690942036473,0.919218786610021,0,0.638436690425939,0.46081959976873,0.263772575460388,0.640413505216868,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.569486723196412,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,1.07833612055328,0,0.762421362438388,0.299581278809645,0,2.51308704225729,1.56441888173049,2.55715457330331,0.62336413367868,0.811206315338788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.89260953707715,1.13195073617213,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0.376736914009382,0.136694227721025,0,2.03974115992626,2.23922323717853,3.31679937130617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0.632022241256357,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,0.302899349844443,0.228620419965,1.00826185136841,0.682205165178267,0.481059208201647,1.75315353272353,0,0,0,0,0,0.187682475451182,0,0,0,3.95326289831947,1.38097570952153,2.86447756719698,4.1244763762485,4.11049511862385,2.2661816921691,2.02506750069542,2.2516060161211,1.35942722695261,2.07104124700728,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 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| ||
|short_description=p4@Rhof | |short_description=p4@Rhof | ||
}} | }} |
Revision as of 00:05, 14 November 2012
Short description: | p4@Rhof |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rhof_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 22bp_to_NM_175092, uc008znd.1, uc008zne.1_5end |
EntrezGene: | Rhof |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.33e-26 | 10 |
visual cortex | 1.33e-26 | 10 |
neocortex | 1.33e-26 | 10 |
regional part of cerebral cortex | 3.15e-21 | 17 |
cerebral cortex | 1.32e-19 | 21 |
cerebral hemisphere | 1.32e-19 | 21 |
pallium | 1.32e-19 | 21 |
gray matter | 3.39e-17 | 34 |
brain grey matter | 8.27e-16 | 29 |
regional part of telencephalon | 8.27e-16 | 29 |
telencephalon | 8.27e-16 | 29 |
regional part of forebrain | 5.48e-11 | 39 |
forebrain | 5.48e-11 | 39 |
future forebrain | 5.48e-11 | 39 |
anterior neural tube | 1.22e-10 | 40 |
neural tube | 4.79e-10 | 52 |
neural rod | 4.79e-10 | 52 |
future spinal cord | 4.79e-10 | 52 |
neural keel | 4.79e-10 | 52 |
regional part of nervous system | 1.51e-09 | 54 |
regional part of brain | 7.21e-09 | 46 |
brain | 1.28e-08 | 47 |
future brain | 1.28e-08 | 47 |
pre-chordal neural plate | 3.79e-08 | 49 |
neurectoderm | 1.56e-07 | 64 |
neural plate | 1.56e-07 | 64 |
presumptive neural plate | 1.56e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.