FFCP PHASE1:Mm9::chr4:49072128..49072202,+: Difference between revisions
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|id=chr4:49072128..49072202,+ | |id=chr4:49072128..49072202,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.89e-12!23;CL:0000337!2.89e-12!23;CL:0000540!3.09e-09!33;CL:0000047!3.09e-09!33;CL:0000031!3.09e-09!33;CL:0000404!3.09e-09!33 | |ontology_enrichment_celltype=CL:0000117!2.89e-12!23;CL:0000337!2.89e-12!23;CL:0000540!3.09e-09!33;CL:0000047!3.09e-09!33;CL:0000031!3.09e-09!33;CL:0000404!3.09e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-13,23;CL:0000337,3.34e-13,23;CL:0000540,1.09e-08,33;CL:0000047,1.09e-08,33;CL:0000031,1.09e-08,33;CL:0000404,1.09e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.38e-16!49;UBERON:0002346!3.18e-15!71;UBERON:0003075!3.18e-15!71;UBERON:0007284!3.18e-15!71;UBERON:0001049!9.14e-15!52;UBERON:0005068!9.14e-15!52;UBERON:0006241!9.14e-15!52;UBERON:0007135!9.14e-15!52;UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!7.15e-14!75;UBERON:0001016!7.15e-14!75;UBERON:0002020!7.83e-14!34;UBERON:0000033!1.48e-13!63;UBERON:0003080!8.98e-13!40;UBERON:0002780!1.78e-12!39;UBERON:0001890!1.78e-12!39;UBERON:0006240!1.78e-12!39;UBERON:0000955!5.32e-12!50;UBERON:0006238!5.32e-12!50;UBERON:0002616!1.72e-11!49;UBERON:0004121!1.86e-11!102;UBERON:0000924!1.86e-11!102;UBERON:0006601!1.86e-11!102;UBERON:0002791!1.34e-10!29;UBERON:0003528!1.34e-10!29;UBERON:0001893!1.34e-10!29;UBERON:0000468!2.81e-10!333;UBERON:0000922!2.94e-08!328;UBERON:0000956!2.83e-07!21;UBERON:0001869!2.83e-07!21;UBERON:0000203!2.83e-07!21 | |ontology_enrichment_uberon=UBERON:0003056!4.38e-16!49;UBERON:0002346!3.18e-15!71;UBERON:0003075!3.18e-15!71;UBERON:0007284!3.18e-15!71;UBERON:0001049!9.14e-15!52;UBERON:0005068!9.14e-15!52;UBERON:0006241!9.14e-15!52;UBERON:0007135!9.14e-15!52;UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!7.15e-14!75;UBERON:0001016!7.15e-14!75;UBERON:0002020!7.83e-14!34;UBERON:0000033!1.48e-13!63;UBERON:0003080!8.98e-13!40;UBERON:0002780!1.78e-12!39;UBERON:0001890!1.78e-12!39;UBERON:0006240!1.78e-12!39;UBERON:0000955!5.32e-12!50;UBERON:0006238!5.32e-12!50;UBERON:0002616!1.72e-11!49;UBERON:0004121!1.86e-11!102;UBERON:0000924!1.86e-11!102;UBERON:0006601!1.86e-11!102;UBERON:0002791!1.34e-10!29;UBERON:0003528!1.34e-10!29;UBERON:0001893!1.34e-10!29;UBERON:0000468!2.81e-10!333;UBERON:0000922!2.94e-08!328;UBERON:0000956!2.83e-07!21;UBERON:0001869!2.83e-07!21;UBERON:0000203!2.83e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.16e-17,64;UBERON:0003075,8.16e-17,64;UBERON:0007284,8.16e-17,64;UBERON:0003056,1.04e-16,49;UBERON:0001049,4.05e-15,52;UBERON:0005068,4.05e-15,52;UBERON:0006241,4.05e-15,52;UBERON:0007135,4.05e-15,52;UBERON:0000073,7.08e-15,54;UBERON:0002020,1.08e-14,34;UBERON:0001017,6.34e-14,73;UBERON:0003080,1.46e-13,40;UBERON:0010314,2.01e-13,92;UBERON:0002780,3.07e-13,39;UBERON:0001890,3.07e-13,39;UBERON:0006240,3.07e-13,39;UBERON:0010371,4.64e-13,73;UBERON:0001016,6.69e-13,75;UBERON:0000955,5.39e-12,47;UBERON:0006238,5.39e-12,47;UBERON:0004121,8.08e-12,95;UBERON:0000924,8.08e-12,95;UBERON:0006601,8.08e-12,95;UBERON:0002616,1.89e-11,46;UBERON:0003528,3.43e-11,29;UBERON:0002791,3.43e-11,29;UBERON:0001893,3.43e-11,29;UBERON:0000956,1.36e-07,21;UBERON:0001869,1.36e-07,21;UBERON:0000203,1.36e-07,21 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0.515672092277442,48.1513176845843,44.9642332381228,38.0298842103708,0,0,0,0,0,3.59520132622086,3.84218305321555,44.3791540680284,58.7275831742854,48.5850660721692,25.7085885963423,28.4920417827581,23.1507610516263,26.1658135879785,23.8996884518605,1.10115880999389,6.2566795661742,4.14737639791857,45.5007692669169,54.0691973690241,52.6122504262328,3.07101298901519,4.50210088025344,6.1119299110724,47.4352022612605,50.8266900452797,65.9854038221564,0.075726193333184,0.0755715601067855,6.95674772884027,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,1.56136794089522,1.52232739156071,1.84492397804847,0.904335843315735,1.88141931417128,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.766371165625774,0,0,0,6.74057877321702,20.1300265240196,37.6963056338593,6.60532416730651,4.85859368927628,8.51930982694196,10.707923362472,1.2220723662038,0,0.252722758433675,0.841767423545896,5.07469727554544,10.3455946995063,18.7264614997563,26.2226383034144,24.7652856910833,24.2134931338366,18.7403449119458,3.3631438196072,5.17363183038821,4.53854592402766,6.51019159406611,4.3839146485515,5.83899223373756,4.87553033131033,4.7329891373827,2.38841120182192,0,0,0,2.07125772535502,2.57978665979206,3.78130329068131,4.97163944728941,6.49321964766433,9.87309522479221,13.7195027402741,9.38956904898667,10.8591768401468,6.7469538464527,1.47750717671186,0.162137619091711,0.292399974850665,0.878200461164203,0.268412837520744,6.30869845692382,48.5709770430223,0.330418782983798,0,4.90562976231038,5.57368012465052,2.31961430379768,1.81515172161008,2.44615848229357,0.951128130562796,0,0.988193728344065,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0,0.199141273254367,4.55202962287396,5.71242563048644,5.63538678365402,9.16430975303914,6.59438456369928,4.41855665309007,5.12215950706484,1.62371162777562,1.8839847340965,1.48076596706161,0,0.83422552858047,0.196558995113203,0,0.202860121388503,0,0.50925170356284,2.87696137450811,2.7562988551756,6.04035109013779,12.9391385874619,4.46569137202204,2.80833905803104,2.52578877947112,0.358794827043824,1.4473305640901,0,2.27389694124582,3.09633455239849,1.69745085775188,1.87752198630802,1.67506257441816,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,3.53211297973142,4.68846746368813,0,0,0.631016438832513,1.17131623288992,0.215423397732799,3.34556317133573,2.22798674082394,1.98153571552183,1.21443210502468,0.292255857911312,0.790575555893047,14.7807805554031,0,1.95872164033981,0.81443479676788,0.824850614862677,5.30980553359851,2.91336763385978,2.72091201268276,6.97838795096823,4.13422650033082,7.37844355065426,4.13485269069154,7.99774204850512,6.77345018930971,4.10847785316561,4.21674434299995,8.25084345985495,3.06395645178409,5.94201610303324,4.2688365648309,5.5727629108214,6.91626911204867,4.45922044005176,5.92376474167636,2.74018454203139,0,0,0,0,1.93757312035087,0.482503399425247,0.119372344003136,0,0.291480836629851,8.15871328846243,0.170870880797853,5.15967169908056,2.03713980106683,1.13021074202815,0.820165366326151,0.228778173206523,0,0,0,0,3.95419991976419,2.64315307264903,2.91614420218863,1.67270636811575,1.52853794622324,1.61837215661785,1.57041565878138,0,0.129614973291793,0,0,1.64468200648377,1.32366792365678,4.4723773319131,3.09983576346555,4.89972763923257,4.10750335260139,3.1249052362548,1.46803082195995,0,0,0,1.41907650703115,0.924398614483445,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0,0.183151624267265,0,0,19.2015626489803,16.1113832777512,12.6037012956667,13.2326950404639,4.7955776383945,6.0431511791176,6.07520250208625,4.95353323546643,5.43770890781046,1.03552062350364,5.91587881229807,10.7736715818278,9.39034831647738,9.72426868273176,7.1268475293514,4.41224420280034,9.33436256766784,7.62329711783909,5.77654577265267,8.84440241173291,8.11133759648767,8.67681170375951,8.80230170216895,9.09157164149144,9.41941690872058,10.4784612082276,8.92309309775387,8.48800570040302,4.53294490883637,8.68473628792944,11.3146853287187,9.22874192028555,10.7296285476294,10.7556348307923,7.0582035311498,8.96914843651771,5.85369513192872,9.73357932320019,7.74083448921412,7.2948495315506,8.18581625056802,8.0773675547962,6.54769669071503,10.5357052006457,6.55882477335881,16.7373087218424,7.01794825336225,7.95022899978704,3.06061331310149,1.10295709559758,0.231867835620421 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| ||
|short_description=p1@E130309F12Rik | |short_description=p1@E130309F12Rik | ||
}} | }} |
Revision as of 23:59, 14 November 2012
Short description: | p1@E130309F12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_E130309F12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000076670, ENSMUST00000137884_5end |
EntrezGene: | E130309F12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-13 | 23 |
neuron | 1.09e-08 | 33 |
neuronal stem cell | 1.09e-08 | 33 |
neuroblast | 1.09e-08 | 33 |
electrically signaling cell | 1.09e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.16e-17 | 64 |
neural plate | 8.16e-17 | 64 |
presumptive neural plate | 8.16e-17 | 64 |
pre-chordal neural plate | 1.04e-16 | 49 |
neural tube | 4.05e-15 | 52 |
neural rod | 4.05e-15 | 52 |
future spinal cord | 4.05e-15 | 52 |
neural keel | 4.05e-15 | 52 |
regional part of nervous system | 7.08e-15 | 54 |
gray matter | 1.08e-14 | 34 |
central nervous system | 6.34e-14 | 73 |
anterior neural tube | 1.46e-13 | 40 |
structure with developmental contribution from neural crest | 2.01e-13 | 92 |
regional part of forebrain | 3.07e-13 | 39 |
forebrain | 3.07e-13 | 39 |
future forebrain | 3.07e-13 | 39 |
ecto-epithelium | 4.64e-13 | 73 |
nervous system | 6.69e-13 | 75 |
brain | 5.39e-12 | 47 |
future brain | 5.39e-12 | 47 |
ectoderm-derived structure | 8.08e-12 | 95 |
ectoderm | 8.08e-12 | 95 |
presumptive ectoderm | 8.08e-12 | 95 |
regional part of brain | 1.89e-11 | 46 |
brain grey matter | 3.43e-11 | 29 |
regional part of telencephalon | 3.43e-11 | 29 |
telencephalon | 3.43e-11 | 29 |
cerebral cortex | 1.36e-07 | 21 |
cerebral hemisphere | 1.36e-07 | 21 |
pallium | 1.36e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.