FFCP PHASE1:Hg19::chr15:57511589..57511608,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11623|TSSclassifier=S|UniProt=F5GY10|association_with_transcript=-19bp_to_ENST00000543579_5end|description=CAGE_peak_4_at_TCF12_5end|id=chr15:57511589..57511608,+|ontology_enrichment_celltype=CL:0000055!2.59e-18!180;CL:0000057!3.10e-14!75;CL:0002620!6.35e-11!23;CL:0000133!8.83e-07!59|ontology_enrichment_celltype_v019=CL:0002620;3.34e-14;23!CL:0000188;3.83e-07;9|ontology_enrichment_celltype_v019_2=CL:0002620,2.49e-14,23;CL:0000057,2.75e-12,76;CL:0000188,4.52e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000924!6.78e-19!173;UBERON:0006601!6.78e-19!173;UBERON:0000073!8.94e-19!94;UBERON:0001016!8.94e-19!94;UBERON:0005743!5.11e-18!86;UBERON:0001017!1.62e-17!82;UBERON:0004121!5.26e-17!169;UBERON:0002346!3.61e-15!90;UBERON:0000475!4.78e-15!365;UBERON:0002616!1.57e-14!59;UBERON:0001049!2.38e-14!57;UBERON:0005068!2.38e-14!57;UBERON:0006241!2.38e-14!57;UBERON:0007135!2.38e-14!57;UBERON:0000033!5.58e-14!123;UBERON:0000153!1.11e-13!129;UBERON:0007811!1.11e-13!129;UBERON:0000955!1.49e-13!69;UBERON:0006238!1.49e-13!69;UBERON:0003075!3.81e-13!86;UBERON:0007284!3.81e-13!86;UBERON:0002780!1.40e-09!41;UBERON:0001890!1.40e-09!41;UBERON:0006240!1.40e-09!41;UBERON:0007023!3.12e-09!115;UBERON:0002097!3.93e-09!40;UBERON:0003056!4.01e-09!61;UBERON:0003080!4.60e-09!42;UBERON:0003102!9.54e-09!95;UBERON:0002199!1.60e-08!45;UBERON:0002416!1.60e-08!45;UBERON:0002020!2.19e-08!34;UBERON:0003528!2.19e-08!34;UBERON:0001893!5.96e-08!34;UBERON:0002791!8.36e-08!33;UBERON:0001869!1.78e-07!32;UBERON:0003076!5.20e-07!15;UBERON:0003057!5.20e-07!15;UBERON:0000914!5.86e-07!83;UBERON:0002329!5.86e-07!83;UBERON:0003077!5.86e-07!83;UBERON:0003059!5.86e-07!83;UBERON:0007282!5.86e-07!83;UBERON:0009618!5.86e-07!83;UBERON:0007285!5.86e-07!83;UBERON:0000481!8.34e-07!347|ontology_enrichment_uberon_v019=UBERON:0002097;3.65e-09;41!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.40e-15,171;UBERON:0000924,9.40e-15,171;UBERON:0006601,9.40e-15,171;UBERON:0002097,3.65e-13,41;UBERON:0003102,2.52e-12,99;UBERON:0002199,1.02e-11,46;UBERON:0002416,1.02e-11,46;UBERON:0001016,8.92e-11,89;UBERON:0002346,1.32e-09,86;UBERON:0001017,1.49e-09,81;UBERON:0001049,8.24e-09,56;UBERON:0005068,8.24e-09,56;UBERON:0006241,8.24e-09,56;UBERON:0007135,8.24e-09,56;UBERON:0010314,3.77e-08,132;UBERON:0011216,1.11e-07,223;UBERON:0003075,1.34e-07,82;UBERON:0007284,1.34e-07,82;UBERON:0000073,1.34e-07,53;UBERON:0002616,1.34e-07,53;UBERON:0010371,1.37e-07,104|phase1_expression=0.54503513781167,1.07050261945492,1.40954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,4.20805600064159,1.65698687863958,1.34465029290355,0,0,0,2.83178433576612,0.408001382488506,0.626909442956176,2.86235987131057,0.958120975510189,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.383587685530591,0,0,0.289693037921647,0,0,0.283604451492204,0.886917589850256,0.43917392846563,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,1.06400514659507,0,0,0.24666754841716,1.8672662123986,0.942974704487816,0.490385709340376,1.51357427644931,0.576175924479999,0.70296429550139,6.24320153660641,1.71141546463335,3.43731965269142,2.11382097558777,1.45685649931318,1.82586048712923,9.39109187772509,4.91337269247072,7.85275936935817,5.94001428641027,3.70900393917835,0,0,7.74346124188705,5.00474079487857,8.03485934904131,4.38977620880838,1.83892677479412,1.20190447125277,0.680593098960126,2.87023417102179,4.27114777637135,1.05965950579781,3.60109315301283,6.49230934202165,2.06112432036503,2.79175284497385,2.02531598689519,2.43592512902997,3.28163906517349,5.33889412125336,4.20279747728911,3.90510551768276,3.72782763442269,1.69560592310488,0,0,0,1.34171076742555,1.85541675650079,3.25343040034651,1.86589899027667,1.7662459561294,1.45990943630332,0,3.21620469096443,0,6.50115099244771,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0.329250856225877,0,0,0,0.325808305310325,0,0,0.695582429850461,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0.207328115540772,0,0.25248486685276,0.317489471460845,0.381988425558278,0,0,2.36503233217644,0.300343057843917,1.14330573052231,2.01835951821649,1.30788020649984,6.3070925806017,0.517086863031111,0,0,1.06375246633948,3.12022310734098,0,0,0.266422179016099,2.7165818795048,0,0,0.977208552881205,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,1.0273816127519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,2.92134555298607,0,1.29005624836306,14.8305268461594,0.815897882290976,0.436350690340377,2.1161073620616,3.71995018166751,0.924351257262837,1.29787968637137,1.00933139868063,5.35401302622108,0,0.101988829741982,0.26721740526556,0,0,0.227336094654718,0,1.65833887891756,2.0686599172379,1.70587185520785,3.33290204049236,0.129177819672012,0,0,0.12729431655633,0.202117188958219,1.74173398317569,2.05339980651169,0.404112318087525,0.502055437748735,2.32862249582209,0,0,3.8614456457388,0,4.69281884806909,2.68931177202306,10.5793006362092,0,0.201273793591026,0|short_description=p4@TCF12}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11623 | |||
|TSSclassifier=S | |||
|UniProt=F5GY10 | |||
|association_with_transcript=-19bp_to_ENST00000543579_5end | |||
|description=CAGE_peak_4_at_TCF12_5end | |||
|id=chr15:57511589..57511608,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.59e-18!180;CL:0000057!3.10e-14!75;CL:0002620!6.35e-11!23;CL:0000133!8.83e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.34e-14;23!CL:0000188;3.83e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.49e-14,23;CL:0000057,2.75e-12,76;CL:0000188,4.52e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!6.78e-19!173;UBERON:0006601!6.78e-19!173;UBERON:0000073!8.94e-19!94;UBERON:0001016!8.94e-19!94;UBERON:0005743!5.11e-18!86;UBERON:0001017!1.62e-17!82;UBERON:0004121!5.26e-17!169;UBERON:0002346!3.61e-15!90;UBERON:0000475!4.78e-15!365;UBERON:0002616!1.57e-14!59;UBERON:0001049!2.38e-14!57;UBERON:0005068!2.38e-14!57;UBERON:0006241!2.38e-14!57;UBERON:0007135!2.38e-14!57;UBERON:0000033!5.58e-14!123;UBERON:0000153!1.11e-13!129;UBERON:0007811!1.11e-13!129;UBERON:0000955!1.49e-13!69;UBERON:0006238!1.49e-13!69;UBERON:0003075!3.81e-13!86;UBERON:0007284!3.81e-13!86;UBERON:0002780!1.40e-09!41;UBERON:0001890!1.40e-09!41;UBERON:0006240!1.40e-09!41;UBERON:0007023!3.12e-09!115;UBERON:0002097!3.93e-09!40;UBERON:0003056!4.01e-09!61;UBERON:0003080!4.60e-09!42;UBERON:0003102!9.54e-09!95;UBERON:0002199!1.60e-08!45;UBERON:0002416!1.60e-08!45;UBERON:0002020!2.19e-08!34;UBERON:0003528!2.19e-08!34;UBERON:0001893!5.96e-08!34;UBERON:0002791!8.36e-08!33;UBERON:0001869!1.78e-07!32;UBERON:0003076!5.20e-07!15;UBERON:0003057!5.20e-07!15;UBERON:0000914!5.86e-07!83;UBERON:0002329!5.86e-07!83;UBERON:0003077!5.86e-07!83;UBERON:0003059!5.86e-07!83;UBERON:0007282!5.86e-07!83;UBERON:0009618!5.86e-07!83;UBERON:0007285!5.86e-07!83;UBERON:0000481!8.34e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.65e-09;41!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.40e-15,171;UBERON:0000924,9.40e-15,171;UBERON:0006601,9.40e-15,171;UBERON:0002097,3.65e-13,41;UBERON:0003102,2.52e-12,99;UBERON:0002199,1.02e-11,46;UBERON:0002416,1.02e-11,46;UBERON:0001016,8.92e-11,89;UBERON:0002346,1.32e-09,86;UBERON:0001017,1.49e-09,81;UBERON:0001049,8.24e-09,56;UBERON:0005068,8.24e-09,56;UBERON:0006241,8.24e-09,56;UBERON:0007135,8.24e-09,56;UBERON:0010314,3.77e-08,132;UBERON:0011216,1.11e-07,223;UBERON:0003075,1.34e-07,82;UBERON:0007284,1.34e-07,82;UBERON:0000073,1.34e-07,53;UBERON:0002616,1.34e-07,53;UBERON:0010371,1.37e-07,104 | |||
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| |||
|short_description=p4@TCF12 | |||
}} |
Revision as of 07:34, 11 September 2013
Short description: | p4@TCF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TCF12_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000543579_5end |
EntrezGene: | TCF12 |
HGNC: | 11623 |
UniProt: | F5GY10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.49e-14 | 23 |
fibroblast | 2.75e-12 | 76 |
cell of skeletal muscle | 4.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.40e-15 | 171 |
ectoderm | 9.40e-15 | 171 |
presumptive ectoderm | 9.40e-15 | 171 |
skin of body | 3.65e-13 | 41 |
surface structure | 2.52e-12 | 99 |
integument | 1.02e-11 | 46 |
integumental system | 1.02e-11 | 46 |
nervous system | 8.92e-11 | 89 |
neurectoderm | 1.32e-09 | 86 |
central nervous system | 1.49e-09 | 81 |
neural tube | 8.24e-09 | 56 |
neural rod | 8.24e-09 | 56 |
future spinal cord | 8.24e-09 | 56 |
neural keel | 8.24e-09 | 56 |
structure with developmental contribution from neural crest | 3.77e-08 | 132 |
organ system subdivision | 1.11e-07 | 223 |
neural plate | 1.34e-07 | 82 |
presumptive neural plate | 1.34e-07 | 82 |
regional part of nervous system | 1.34e-07 | 53 |
regional part of brain | 1.34e-07 | 53 |
ecto-epithelium | 1.37e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.