FFCP PHASE1:Hg19::chr17:53809233..53809251,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55273|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25607|TSSclassifier=N|UniProt=Q9NV29|association_with_transcript=230bp_to_ENST00000299377,NM_001099640,uc002iuk.3_5end|coexpression_cluster_id=C137|description=CAGE_peak_3_at_TMEM100_5end|id=chr17:53809233..53809251,-|ontology_enrichment_celltype=CL:0000708!2.55e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010227;9.48e-18;1!UBERON:0005062;1.33e-17;4!UBERON:0007284;1.33e-17;4!UBERON:0007297;1.51e-09;2!UBERON:0001041;2.99e-09;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4556;5.80e-07;3|ontology_enrichment_disease_v019_2=DOID:4556,5.80e-07,3|ontology_enrichment_uberon=UBERON:0007023!3.99e-27!115;UBERON:0003103!2.68e-12!69;UBERON:0003978!7.27e-09!3;UBERON:0009751!7.27e-09!3;UBERON:0000946!7.27e-09!3;UBERON:0002523!7.27e-09!3;UBERON:0005983!7.27e-09!3;UBERON:0002165!7.27e-09!3;UBERON:0002062!7.27e-09!3;UBERON:0007280!7.27e-09!3;UBERON:0007100!1.05e-08!27;UBERON:0004151!1.06e-08!3;UBERON:0002240!1.04e-07!3;UBERON:0003210!2.55e-07!3|ontology_enrichment_uberon_v019=UBERON:0002133;4.28e-34;2!UBERON:0002081;1.17e-33;2!UBERON:0003978;4.11e-23;3!UBERON:0000946;4.11e-23;3!UBERON:0004151;8.03e-23;3!UBERON:0006947;8.03e-23;3!UBERON:0004054;8.03e-23;3!UBERON:0002135;3.44e-18;1!UBERON:0002171;3.44e-18;1!UBERON:0006518;3.44e-18;1!UBERON:0008949;3.44e-18;1!UBERON:0000101;3.44e-18;1!UBERON:0002167;3.44e-18;1!UBERON:0002079;9.48e-18;1!UBERON:0001000;9.48e-18;1!UBERON:0002134;9.48e-18;1!UBERON:0001301;9.48e-18;1!UBERON:0005208;9.48e-18;1!UBERON:0004145;9.48e-18;1!UBERON:0005946;9.48e-18;1!UBERON:0005352;9.48e-18;1!UBERON:0005965;9.48e-18;1!UBERON:0002078;9.48e-18;1!UBERON:0005904;2.19e-17;4!UBERON:0000341;1.51e-09;2!UBERON:0010313;1.33e-07;10!UBERON:0000058;1.62e-07;10!UBERON:0002048;1.68e-07;22!UBERON:0000117;1.68e-07;22!UBERON:0000171;1.68e-07;22!UBERON:0000170;1.68e-07;22!UBERON:0000948;2.19e-07;22!UBERON:0003135;6.54e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.29e-34,2;UBERON:0002081,1.17e-33,2;UBERON:0010227,1.17e-33,2;UBERON:0003978,4.12e-23,3;UBERON:0009751,4.12e-23,3;UBERON:0000946,4.12e-23,3;UBERON:0002523,4.12e-23,3;UBERON:0005983,4.12e-23,3;UBERON:0002165,4.12e-23,3;UBERON:0002062,4.12e-23,3;UBERON:0007280,4.12e-23,3;UBERON:0006947,6.44e-23,3;UBERON:0004054,6.44e-23,3;UBERON:0004151,8.04e-23,3;UBERON:0002171,3.16e-18,1;UBERON:0006518,3.16e-18,1;UBERON:0008949,3.16e-18,1;UBERON:0000101,3.16e-18,1;UBERON:0002167,3.16e-18,1;UBERON:0002135,3.75e-18,1;UBERON:0001301,5.26e-18,1;UBERON:0002134,8.72e-18,1;UBERON:0005208,8.72e-18,1;UBERON:0005946,8.72e-18,1;UBERON:0005965,8.72e-18,1;UBERON:0002078,8.72e-18,1;UBERON:0002079,1.03e-17,1;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0005904,1.86e-17,4;UBERON:0007023,1.08e-13,114;UBERON:0004797,1.77e-10,7;UBERON:0000341,1.86e-09,2;UBERON:0005157,5.72e-09,47;UBERON:0010313,1.33e-07,10;UBERON:0002342,1.33e-07,10;UBERON:0005062,1.33e-07,10;UBERON:0002048,1.66e-07,22;UBERON:0000117,1.66e-07,22;UBERON:0000171,1.66e-07,22;UBERON:0000170,1.66e-07,22;UBERON:0005597,1.66e-07,22;UBERON:0000118,1.66e-07,22;UBERON:0003135,6.16e-07,11;UBERON:0000948,8.26e-07,24;UBERON:0005498,8.26e-07,24;UBERON:0004140,8.26e-07,24;UBERON:0009881,8.26e-07,24;UBERON:0004141,8.26e-07,24;UBERON:0003084,8.26e-07,24;UBERON:0007005,8.26e-07,24;UBERON:0004139,8.26e-07,24;UBERON:0004291,8.26e-07,24;UBERON:0004145,8.62e-07,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.756787138224657,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0.276283915531148,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25607 | |||
|TSSclassifier=N | |||
|UniProt=Q9NV29 | |||
|association_with_transcript=230bp_to_ENST00000299377,NM_001099640,uc002iuk.3_5end | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_3_at_TMEM100_5end | |||
|id=chr17:53809233..53809251,- | |||
|ontology_enrichment_celltype=CL:0000708!2.55e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.48e-18;1!UBERON:0005062;1.33e-17;4!UBERON:0007284;1.33e-17;4!UBERON:0007297;1.51e-09;2!UBERON:0001041;2.99e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;5.80e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,5.80e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.99e-27!115;UBERON:0003103!2.68e-12!69;UBERON:0003978!7.27e-09!3;UBERON:0009751!7.27e-09!3;UBERON:0000946!7.27e-09!3;UBERON:0002523!7.27e-09!3;UBERON:0005983!7.27e-09!3;UBERON:0002165!7.27e-09!3;UBERON:0002062!7.27e-09!3;UBERON:0007280!7.27e-09!3;UBERON:0007100!1.05e-08!27;UBERON:0004151!1.06e-08!3;UBERON:0002240!1.04e-07!3;UBERON:0003210!2.55e-07!3 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.29e-34,2;UBERON:0002081,1.17e-33,2;UBERON:0010227,1.17e-33,2;UBERON:0003978,4.12e-23,3;UBERON:0009751,4.12e-23,3;UBERON:0000946,4.12e-23,3;UBERON:0002523,4.12e-23,3;UBERON:0005983,4.12e-23,3;UBERON:0002165,4.12e-23,3;UBERON:0002062,4.12e-23,3;UBERON:0007280,4.12e-23,3;UBERON:0006947,6.44e-23,3;UBERON:0004054,6.44e-23,3;UBERON:0004151,8.04e-23,3;UBERON:0002171,3.16e-18,1;UBERON:0006518,3.16e-18,1;UBERON:0008949,3.16e-18,1;UBERON:0000101,3.16e-18,1;UBERON:0002167,3.16e-18,1;UBERON:0002135,3.75e-18,1;UBERON:0001301,5.26e-18,1;UBERON:0002134,8.72e-18,1;UBERON:0005208,8.72e-18,1;UBERON:0005946,8.72e-18,1;UBERON:0005965,8.72e-18,1;UBERON:0002078,8.72e-18,1;UBERON:0002079,1.03e-17,1;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0005904,1.86e-17,4;UBERON:0007023,1.08e-13,114;UBERON:0004797,1.77e-10,7;UBERON:0000341,1.86e-09,2;UBERON:0005157,5.72e-09,47;UBERON:0010313,1.33e-07,10;UBERON:0002342,1.33e-07,10;UBERON:0005062,1.33e-07,10;UBERON:0002048,1.66e-07,22;UBERON:0000117,1.66e-07,22;UBERON:0000171,1.66e-07,22;UBERON:0000170,1.66e-07,22;UBERON:0005597,1.66e-07,22;UBERON:0000118,1.66e-07,22;UBERON:0003135,6.16e-07,11;UBERON:0000948,8.26e-07,24;UBERON:0005498,8.26e-07,24;UBERON:0004140,8.26e-07,24;UBERON:0009881,8.26e-07,24;UBERON:0004141,8.26e-07,24;UBERON:0003084,8.26e-07,24;UBERON:0007005,8.26e-07,24;UBERON:0004139,8.26e-07,24;UBERON:0004291,8.26e-07,24;UBERON:0004145,8.62e-07,3 | |||
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|short_description=p3@TMEM100 | |||
}} |
Revision as of 14:40, 11 September 2013
Short description: | p3@TMEM100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMEM100_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 230bp_to_ENST00000299377, NM_001099640, uc002iuk.3_5end |
EntrezGene: | TMEM100 |
HGNC: | 25607 |
UniProt: | Q9NV29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.80e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.