FFCP PHASE1:Mm9::chr14:49287186..49287225,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18424|HGNC=|MCL_coexpression_id=53|UniProt=Q8R0B5|association_with_transcript=0bp_to_ENSMUST00000119070_5end|description=CAGE_peak_1_at_Otx2_5end|id=chr14:49287186..49287225,-|ontology_enrichment_celltype=CL:0000221!1.85e-07!44;CL:0000133!1.85e-07!44;CL:0002319!3.70e-07!43;CL:0000117!4.67e-07!23;CL:0000337!4.67e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.88e-07,23;CL:0000337,3.88e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.88e-27!63;UBERON:0003056!5.05e-21!49;UBERON:0004121!1.78e-17!102;UBERON:0000924!1.78e-17!102;UBERON:0006601!1.78e-17!102;UBERON:0000955!2.70e-17!50;UBERON:0006238!2.70e-17!50;UBERON:0002616!6.19e-17!49;UBERON:0001017!3.53e-16!73;UBERON:0005743!3.53e-16!73;UBERON:0007811!4.96e-16!86;UBERON:0000073!2.36e-15!75;UBERON:0001016!2.36e-15!75;UBERON:0002346!4.85e-15!71;UBERON:0003075!4.85e-15!71;UBERON:0007284!4.85e-15!71;UBERON:0000153!2.61e-13!94;UBERON:0003080!1.66e-12!40;UBERON:0001049!5.74e-12!52;UBERON:0005068!5.74e-12!52;UBERON:0006241!5.74e-12!52;UBERON:0007135!5.74e-12!52;UBERON:0002780!1.08e-11!39;UBERON:0001890!1.08e-11!39;UBERON:0006240!1.08e-11!39;UBERON:0000020!1.08e-11!12;UBERON:0001032!1.08e-11!12;UBERON:0004456!1.08e-11!12;UBERON:0000970!3.23e-11!9;UBERON:0000019!3.23e-11!9;UBERON:0000047!3.23e-11!9;UBERON:0004088!3.23e-11!9;UBERON:0002104!3.23e-11!9;UBERON:0001456!3.23e-11!9;UBERON:0003072!3.23e-11!9;UBERON:0003071!3.23e-11!9;UBERON:0004128!3.23e-11!9;UBERON:0001444!5.68e-10!11;UBERON:0005085!3.59e-09!13;UBERON:0001894!3.95e-09!10;UBERON:0006222!3.95e-09!10;UBERON:0000007!1.55e-07!8;UBERON:0003296!1.55e-07!8;UBERON:0010133!1.55e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.74e-20,49;UBERON:0002346,2.15e-17,64;UBERON:0003075,2.15e-17,64;UBERON:0007284,2.15e-17,64;UBERON:0004121,1.96e-16,95;UBERON:0000924,1.96e-16,95;UBERON:0006601,1.96e-16,95;UBERON:0010371,1.01e-13,73;UBERON:0001017,2.61e-13,73;UBERON:0002616,2.84e-13,46;UBERON:0000073,5.47e-13,54;UBERON:0000955,8.51e-13,47;UBERON:0006238,8.51e-13,47;UBERON:0001016,1.23e-12,75;UBERON:0000970,2.84e-12,9;UBERON:0000019,2.84e-12,9;UBERON:0000047,2.84e-12,9;UBERON:0010312,2.84e-12,9;UBERON:0004088,2.84e-12,9;UBERON:0002104,2.84e-12,9;UBERON:0001456,2.84e-12,9;UBERON:0003072,2.84e-12,9;UBERON:0004128,2.84e-12,9;UBERON:0003071,2.84e-12,9;UBERON:0003080,1.53e-11,40;UBERON:0001049,1.04e-10,52;UBERON:0005068,1.04e-10,52;UBERON:0006241,1.04e-10,52;UBERON:0007135,1.04e-10,52;UBERON:0002780,1.05e-10,39;UBERON:0001890,1.05e-10,39;UBERON:0006240,1.05e-10,39;UBERON:0001894,5.88e-10,10;UBERON:0006222,5.88e-10,10;UBERON:0001444,1.66e-09,11;UBERON:0010314,1.66e-08,92;UBERON:0000020,1.78e-08,12;UBERON:0001032,1.78e-08,12;UBERON:0004456,1.78e-08,12;UBERON:0000007,3.43e-08,8;UBERON:0003296,3.43e-08,8;UBERON:0010133,3.43e-08,8;UBERON:0000033,1.30e-07,13;UBERON:0005085,1.30e-07,13;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,20.2111288115714,28.9700549620682,4.61955191363696,23.0004102983955,0,0,0,0,0,0,53.6138621277934,76.1747010151727,56.4109949120499,0.677689064138264,2.66788438833342,0,0,0,2.09720077362883,1.53687322128622,0,0.135005938331691,0,0,0,1.46988959057945,1.72521847832825,1.83843757322004,2.20231761998777,4.97980618532232,7.83393319606842,24.9265083810066,24.0612502674337,18.7528813400434,1.3959149950069,2.8138130501584,4.43114918552749,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1029438356351,17.5935233723302,0,0,0,0,24.2660835835813,1.83000241127451,1.88481528169297,0.173824320192276,0,9.3504620051802,4.86723789203273,0,0,0,40.1943944743165,32.7903516266013,30.3470777852184,39.9737928167875,56.8157163240646,77.1533900376058,125.679559599438,181.875047370434,107.103195485952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,10.8049842998249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.703270119553219,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,12.2441543941291,9.57254259992383,11.7885369267376,4.43350584105684,6.59964625127661,4.77192159746151,5.48036908406279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,1.41907650703115,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,14.5302286617847,19.5522187966505,9.73181552798565,3.16038732188782,6.70762120409543,3.49302666055027,2.44471400581777,3.09052585858341,1.60459604795908,3.79045817645696,4.30914809813408,3.01802146217722,3.7456602987953,3.9695594491019,2.41228969613576,2.38146845641537,2.66533949673168,2.12200142510076,4.12085900803307,4.12156976376312,2.40008476669791,4.08194354166476,4.29185141905178,3.34296758254356,3.67026583619789,3.9768865709088,3.65855945745545,2.63069711437843,2.58027816307137,2.80571135828869,3.32178050747688,2.1670986122624,2.45538625901814,2.78886314134739,3.2794123866794,12.7403394748352,4.21076895201735,1.28922632428979,0,0,0|short_description=p1@Otx2}} | ||
|EntrezGene=18424 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|UniProt=Q8R0B5 | |||
|association_with_transcript=0bp_to_ENSMUST00000119070_5end | |||
|description=CAGE_peak_1_at_Otx2_5end | |||
|id=chr14:49287186..49287225,- | |||
|ontology_enrichment_celltype=CL:0000221!1.85e-07!44;CL:0000133!1.85e-07!44;CL:0002319!3.70e-07!43;CL:0000117!4.67e-07!23;CL:0000337!4.67e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.88e-07,23;CL:0000337,3.88e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.88e-27!63;UBERON:0003056!5.05e-21!49;UBERON:0004121!1.78e-17!102;UBERON:0000924!1.78e-17!102;UBERON:0006601!1.78e-17!102;UBERON:0000955!2.70e-17!50;UBERON:0006238!2.70e-17!50;UBERON:0002616!6.19e-17!49;UBERON:0001017!3.53e-16!73;UBERON:0005743!3.53e-16!73;UBERON:0007811!4.96e-16!86;UBERON:0000073!2.36e-15!75;UBERON:0001016!2.36e-15!75;UBERON:0002346!4.85e-15!71;UBERON:0003075!4.85e-15!71;UBERON:0007284!4.85e-15!71;UBERON:0000153!2.61e-13!94;UBERON:0003080!1.66e-12!40;UBERON:0001049!5.74e-12!52;UBERON:0005068!5.74e-12!52;UBERON:0006241!5.74e-12!52;UBERON:0007135!5.74e-12!52;UBERON:0002780!1.08e-11!39;UBERON:0001890!1.08e-11!39;UBERON:0006240!1.08e-11!39;UBERON:0000020!1.08e-11!12;UBERON:0001032!1.08e-11!12;UBERON:0004456!1.08e-11!12;UBERON:0000970!3.23e-11!9;UBERON:0000019!3.23e-11!9;UBERON:0000047!3.23e-11!9;UBERON:0004088!3.23e-11!9;UBERON:0002104!3.23e-11!9;UBERON:0001456!3.23e-11!9;UBERON:0003072!3.23e-11!9;UBERON:0003071!3.23e-11!9;UBERON:0004128!3.23e-11!9;UBERON:0001444!5.68e-10!11;UBERON:0005085!3.59e-09!13;UBERON:0001894!3.95e-09!10;UBERON:0006222!3.95e-09!10;UBERON:0000007!1.55e-07!8;UBERON:0003296!1.55e-07!8;UBERON:0010133!1.55e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.74e-20,49;UBERON:0002346,2.15e-17,64;UBERON:0003075,2.15e-17,64;UBERON:0007284,2.15e-17,64;UBERON:0004121,1.96e-16,95;UBERON:0000924,1.96e-16,95;UBERON:0006601,1.96e-16,95;UBERON:0010371,1.01e-13,73;UBERON:0001017,2.61e-13,73;UBERON:0002616,2.84e-13,46;UBERON:0000073,5.47e-13,54;UBERON:0000955,8.51e-13,47;UBERON:0006238,8.51e-13,47;UBERON:0001016,1.23e-12,75;UBERON:0000970,2.84e-12,9;UBERON:0000019,2.84e-12,9;UBERON:0000047,2.84e-12,9;UBERON:0010312,2.84e-12,9;UBERON:0004088,2.84e-12,9;UBERON:0002104,2.84e-12,9;UBERON:0001456,2.84e-12,9;UBERON:0003072,2.84e-12,9;UBERON:0004128,2.84e-12,9;UBERON:0003071,2.84e-12,9;UBERON:0003080,1.53e-11,40;UBERON:0001049,1.04e-10,52;UBERON:0005068,1.04e-10,52;UBERON:0006241,1.04e-10,52;UBERON:0007135,1.04e-10,52;UBERON:0002780,1.05e-10,39;UBERON:0001890,1.05e-10,39;UBERON:0006240,1.05e-10,39;UBERON:0001894,5.88e-10,10;UBERON:0006222,5.88e-10,10;UBERON:0001444,1.66e-09,11;UBERON:0010314,1.66e-08,92;UBERON:0000020,1.78e-08,12;UBERON:0001032,1.78e-08,12;UBERON:0004456,1.78e-08,12;UBERON:0000007,3.43e-08,8;UBERON:0003296,3.43e-08,8;UBERON:0010133,3.43e-08,8;UBERON:0000033,1.30e-07,13;UBERON:0005085,1.30e-07,13;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,20.2111288115714,28.9700549620682,4.61955191363696,23.0004102983955,0,0,0,0,0,0,53.6138621277934,76.1747010151727,56.4109949120499,0.677689064138264,2.66788438833342,0,0,0,2.09720077362883,1.53687322128622,0,0.135005938331691,0,0,0,1.46988959057945,1.72521847832825,1.83843757322004,2.20231761998777,4.97980618532232,7.83393319606842,24.9265083810066,24.0612502674337,18.7528813400434,1.3959149950069,2.8138130501584,4.43114918552749,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1029438356351,17.5935233723302,0,0,0,0,24.2660835835813,1.83000241127451,1.88481528169297,0.173824320192276,0,9.3504620051802,4.86723789203273,0,0,0,40.1943944743165,32.7903516266013,30.3470777852184,39.9737928167875,56.8157163240646,77.1533900376058,125.679559599438,181.875047370434,107.103195485952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,10.8049842998249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.703270119553219,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,12.2441543941291,9.57254259992383,11.7885369267376,4.43350584105684,6.59964625127661,4.77192159746151,5.48036908406279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,1.41907650703115,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,14.5302286617847,19.5522187966505,9.73181552798565,3.16038732188782,6.70762120409543,3.49302666055027,2.44471400581777,3.09052585858341,1.60459604795908,3.79045817645696,4.30914809813408,3.01802146217722,3.7456602987953,3.9695594491019,2.41228969613576,2.38146845641537,2.66533949673168,2.12200142510076,4.12085900803307,4.12156976376312,2.40008476669791,4.08194354166476,4.29185141905178,3.34296758254356,3.67026583619789,3.9768865709088,3.65855945745545,2.63069711437843,2.58027816307137,2.80571135828869,3.32178050747688,2.1670986122624,2.45538625901814,2.78886314134739,3.2794123866794,12.7403394748352,4.21076895201735,1.28922632428979,0,0,0 | |||
|short_description=p1@Otx2 | |||
}} |
Revision as of 02:12, 13 September 2013
Short description: | p1@Otx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Otx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 0bp_to_ENSMUST00000119070_5end |
EntrezGene: | Otx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.88e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.88e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.