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FFCP PHASE1:Mm9::chr15:81641878..81641921,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=21685|HGNC=|MCL_coexpression_id=780|UniProt=Q9JLC6|association_with_transcript=34bp_to_ENSMUST00000023024,NM_017376,uc007wxk.2_5end|description=CAGE_peak_1_at_Tef_5end|id=chr15:81641878..81641921,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.17e-13!73;UBERON:0005743!4.17e-13!73;UBERON:0004121!7.12e-13!102;UBERON:0000924!7.12e-13!102;UBERON:0006601!7.12e-13!102;UBERON:0000073!1.16e-12!75;UBERON:0001016!1.16e-12!75;UBERON:0000955!1.51e-11!50;UBERON:0006238!1.51e-11!50;UBERON:0000033!1.90e-11!63;UBERON:0002616!5.10e-11!49;UBERON:0001049!4.34e-10!52;UBERON:0005068!4.34e-10!52;UBERON:0006241!4.34e-10!52;UBERON:0007135!4.34e-10!52;UBERON:0004111!1.61e-08!122;UBERON:0002346!2.01e-08!71;UBERON:0003075!2.01e-08!71;UBERON:0007284!2.01e-08!71;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0007023!8.79e-08!51;UBERON:0003080!2.35e-07!40;UBERON:0000025!6.49e-07!114;UBERON:0002780!6.60e-07!39;UBERON:0001890!6.60e-07!39;UBERON:0006240!6.60e-07!39;UBERON:0002619!9.21e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.60e-13,95;UBERON:0000924,1.60e-13,95;UBERON:0006601,1.60e-13,95;UBERON:0001017,4.17e-13,73;UBERON:0001016,1.16e-12,75;UBERON:0000073,4.79e-11,54;UBERON:0000955,4.25e-10,47;UBERON:0006238,4.25e-10,47;UBERON:0001049,4.34e-10,52;UBERON:0005068,4.34e-10,52;UBERON:0006241,4.34e-10,52;UBERON:0007135,4.34e-10,52;UBERON:0010371,6.01e-10,73;UBERON:0002616,1.37e-09,46;UBERON:0002346,4.19e-09,64;UBERON:0003075,4.19e-09,64;UBERON:0007284,4.19e-09,64;UBERON:0004111,1.61e-08,122;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0007023,8.79e-08,51;UBERON:0010314,1.14e-07,92;UBERON:0003080,2.35e-07,40;UBERON:0000025,6.49e-07,114;UBERON:0002780,6.60e-07,39;UBERON:0001890,6.60e-07,39;UBERON:0006240,6.60e-07,39;UBERON:0002619,9.21e-07,17|phase1_expression=31.869620573854,57.5809422604946,92.3648455960758,54.7460222465362,95.6710844197523,28.3715969531094,23.3612640595526,10.7172358456508,20.4143647119917,18.9592266320815,25.6826952338257,30.5527368952138,11.4704489053908,13.2004807652686,5.3297561890506,9.71881283471165,4.19737126876888,17.5081501773822,19.6073640056206,15.7024171165271,43.2019913967434,13.1064055585169,15.4107875591972,31.3585148675077,34.8702107222098,51.6808767703518,40.9223896351121,29.7350301106527,25.6531616266105,24.4469225867133,8.86922042621219,29.8464416526027,21.52726756546,0,2.88851619751275,7.14808975041517,9.18762103180661,0,0,2.09409497589519,0.588231488031014,1.36609096991689,0.971020706062307,28.9562681343828,26.6621329107323,21.8420635072401,50.8554373826225,30.9595722060234,32.5135550447018,31.3032137509596,26.7374065304442,30.188038516644,23.6573474541408,19.5847778343063,26.2153163331122,9.51859913333004,10.601737277734,18.0485232297105,16.1853168687678,23.8045940672415,26.6209189472595,19.3141383279405,31.1253178638899,49.4944844504769,53.3987835786166,54.7069688508497,50.0332184565736,54.5589993556607,20.841612074004,19.5758610580951,19.7705463670299,39.9911378165325,44.3945767312743,15.5563315002992,14.3768206527355,25.7381260250806,120.026310289334,76.4847155130274,79.1073646269654,16.353899678544,14.9124859071928,11.4600941522487,72.587579740359,72.5963766940867,75.4823344017442,27.1058298635774,24.2031857358475,16.7759501242771,18.2500125932974,22.6714680320357,37.3925190425164,9.46466264679525,51.677821361789,26.445456390253,45.4843492213368,92.7415656291485,64.6044332606059,24.3715361286623,27.797102492507,29.6805242588686,34.36579442551,48.7640614174408,175.815615397586,170.656008756799,8.65964164044856,9.12095515710355,6.57181778519218,58.8046980553159,13.4647699496529,59.8221820431244,14.3992821215893,14.0054120023585,15.912469310668,20.6490017557093,31.5137735123689,27.6466500925286,29.9105910958592,90.085399361105,49.538190909193,33.3239710891663,39.3097902859501,27.1530141755724,33.550517019262,106.572210112203,107.446160595302,25.034791410442,5.75112597628417,4.79922184794726,3.68503658511888,102.456797352899,164.242716411887,36.5654164648435,155.051293611511,142.689225190324,85.8164624030983,92.6397612116896,25.0524835071778,20.6515571212754,34.6230179054134,40.6152781860895,9.62891277924007,13.104419952708,14.945156773844,12.5084998803643,31.5689356062161,32.1565437914973,28.4853242661576,67.2628763921441,13.5807835547691,18.3432897762785,16.3634545472472,16.8780713969233,16.9608822027615,21.2433821578522,19.5493029587546,18.7092210809384,3.51106593656617,3.60287069960601,3.9782889915383,15.9486844852336,19.465662978431,14.7650890398032,18.9395788468168,19.6764231747404,18.357786433598,23.0208605302904,14.7550370769791,33.2781225746433,21.8864600384929,43.176043052802,73.2862038294536,60.0881948318116,25.0287131431798,38.248829346706,125.33280934422,41.8821772383688,12.8863325363681,30.9407162996347,14.0770245353254,14.1664369834868,12.7578786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|EntrezGene=21685
|HGNC=
|MCL_coexpression_id=780
|UniProt=Q9JLC6
|association_with_transcript=34bp_to_ENSMUST00000023024,NM_017376,uc007wxk.2_5end
|description=CAGE_peak_1_at_Tef_5end
|id=chr15:81641878..81641921,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.17e-13!73;UBERON:0005743!4.17e-13!73;UBERON:0004121!7.12e-13!102;UBERON:0000924!7.12e-13!102;UBERON:0006601!7.12e-13!102;UBERON:0000073!1.16e-12!75;UBERON:0001016!1.16e-12!75;UBERON:0000955!1.51e-11!50;UBERON:0006238!1.51e-11!50;UBERON:0000033!1.90e-11!63;UBERON:0002616!5.10e-11!49;UBERON:0001049!4.34e-10!52;UBERON:0005068!4.34e-10!52;UBERON:0006241!4.34e-10!52;UBERON:0007135!4.34e-10!52;UBERON:0004111!1.61e-08!122;UBERON:0002346!2.01e-08!71;UBERON:0003075!2.01e-08!71;UBERON:0007284!2.01e-08!71;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0007023!8.79e-08!51;UBERON:0003080!2.35e-07!40;UBERON:0000025!6.49e-07!114;UBERON:0002780!6.60e-07!39;UBERON:0001890!6.60e-07!39;UBERON:0006240!6.60e-07!39;UBERON:0002619!9.21e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.60e-13,95;UBERON:0000924,1.60e-13,95;UBERON:0006601,1.60e-13,95;UBERON:0001017,4.17e-13,73;UBERON:0001016,1.16e-12,75;UBERON:0000073,4.79e-11,54;UBERON:0000955,4.25e-10,47;UBERON:0006238,4.25e-10,47;UBERON:0001049,4.34e-10,52;UBERON:0005068,4.34e-10,52;UBERON:0006241,4.34e-10,52;UBERON:0007135,4.34e-10,52;UBERON:0010371,6.01e-10,73;UBERON:0002616,1.37e-09,46;UBERON:0002346,4.19e-09,64;UBERON:0003075,4.19e-09,64;UBERON:0007284,4.19e-09,64;UBERON:0004111,1.61e-08,122;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0007023,8.79e-08,51;UBERON:0010314,1.14e-07,92;UBERON:0003080,2.35e-07,40;UBERON:0000025,6.49e-07,114;UBERON:0002780,6.60e-07,39;UBERON:0001890,6.60e-07,39;UBERON:0006240,6.60e-07,39;UBERON:0002619,9.21e-07,17
|phase1_expression=31.869620573854,57.5809422604946,92.3648455960758,54.7460222465362,95.6710844197523,28.3715969531094,23.3612640595526,10.7172358456508,20.4143647119917,18.9592266320815,25.6826952338257,30.5527368952138,11.4704489053908,13.2004807652686,5.3297561890506,9.71881283471165,4.19737126876888,17.5081501773822,19.6073640056206,15.7024171165271,43.2019913967434,13.1064055585169,15.4107875591972,31.3585148675077,34.8702107222098,51.6808767703518,40.9223896351121,29.7350301106527,25.6531616266105,24.4469225867133,8.86922042621219,29.8464416526027,21.52726756546,0,2.88851619751275,7.14808975041517,9.18762103180661,0,0,2.09409497589519,0.588231488031014,1.36609096991689,0.971020706062307,28.9562681343828,26.6621329107323,21.8420635072401,50.8554373826225,30.9595722060234,32.5135550447018,31.3032137509596,26.7374065304442,30.188038516644,23.6573474541408,19.5847778343063,26.2153163331122,9.51859913333004,10.601737277734,18.0485232297105,16.1853168687678,23.8045940672415,26.6209189472595,19.3141383279405,31.1253178638899,49.4944844504769,53.3987835786166,54.7069688508497,50.0332184565736,54.5589993556607,20.841612074004,19.5758610580951,19.7705463670299,39.9911378165325,44.3945767312743,15.5563315002992,14.3768206527355,25.7381260250806,120.026310289334,76.4847155130274,79.1073646269654,16.353899678544,14.9124859071928,11.4600941522487,72.587579740359,72.5963766940867,75.4823344017442,27.1058298635774,24.2031857358475,16.7759501242771,18.2500125932974,22.6714680320357,37.3925190425164,9.46466264679525,51.677821361789,26.445456390253,45.4843492213368,92.7415656291485,64.6044332606059,24.3715361286623,27.797102492507,29.6805242588686,34.36579442551,48.7640614174408,175.815615397586,170.656008756799,8.65964164044856,9.12095515710355,6.57181778519218,58.8046980553159,13.4647699496529,59.8221820431244,14.3992821215893,14.0054120023585,15.912469310668,20.6490017557093,31.5137735123689,27.6466500925286,29.9105910958592,90.085399361105,49.538190909193,33.3239710891663,39.3097902859501,27.1530141755724,33.550517019262,106.572210112203,107.446160595302,25.034791410442,5.75112597628417,4.79922184794726,3.68503658511888,102.456797352899,164.242716411887,36.5654164648435,155.051293611511,142.689225190324,85.8164624030983,92.6397612116896,25.0524835071778,20.6515571212754,34.6230179054134,40.6152781860895,9.62891277924007,13.104419952708,14.945156773844,12.5084998803643,31.5689356062161,32.1565437914973,28.4853242661576,67.2628763921441,13.5807835547691,18.3432897762785,16.3634545472472,16.8780713969233,16.9608822027615,21.2433821578522,19.5493029587546,18.7092210809384,3.51106593656617,3.60287069960601,3.9782889915383,15.9486844852336,19.465662978431,14.7650890398032,18.9395788468168,19.6764231747404,18.357786433598,23.0208605302904,14.7550370769791,33.2781225746433,21.8864600384929,43.176043052802,73.2862038294536,60.0881948318116,25.0287131431798,38.248829346706,125.33280934422,41.8821772383688,12.8863325363681,30.9407162996347,14.0770245353254,14.1664369834868,12.7578786708872,10.4875432804138,11.3412802360884,14.4571475845545,31.7934471234823,20.0932724763293,29.9088898472321,32.6288614147487,31.5841821132975,25.1669434423182,4.97117514711797,13.1433240347882,20.1047975010267,12.6815848996799,22.5415471346161,16.6994088833158,20.1710586654331,28.8258219749209,32.693289693241,70.114820290311,17.1128613347099,19.8669433914099,98.1258195658463,9.67701613153345,6.4864468387357,6.97072548393047,7.70868461276311,7.23531479257251,12.9859184408524,16.686375972147,56.0987884641622,10.4333337011471,60.3826467414889,48.3783231969054,40.5648975048929,22.7320990152401,10.7638448113147,45.8321345295199,70.7604718338096,10.8010104709176,14.0149879740142,13.2401166904647,18.0711491182147,18.0906758037161,25.2326259339175,32.1970518965368,36.2560831444239,40.5280382057258,38.5880540151119,67.6755489775998,8.46156411142888,13.7416605652436,45.2373851817817,29.3709069262103,6.39293554924747,29.8011686009111,84.128509153603,65.6385444916338,17.2131692645509,127.750289165413,20.1925260426404,24.9880796349849,42.869256148827,26.5255365727333,28.5182302825464,30.8553418559827,21.4549671887694,35.0707029493574,45.8533822417967,109.891890216258,45.7047074370625,20.1214132143998,30.7856353178259,57.5745729174149,7.96470830039777,12.1390318077491,9.06970670894253,7.73280826999182,8.26845300066164,12.912276213645,24.0338312646446,18.1766864738753,21.0333453246986,18.0140952023415,5.27093042874994,5.15677716240934,21.7881347682424,16.3855595568492,22.2496936106338,24.8630960636647,25.0049729435606,26.3985850051064,29.947921749586,47.4965320618775,18.5390649370331,23.9370240076117,20.2886126210565,88.3790315766333,44.5641817680699,25.7536189443226,29.9624583447873,32.4998981495221,18.9462543809403,80.4745810725612,12.6444451790411,13.2087595496462,8.88933731374616,9.98352822124862,10.2520670790769,6.17701067657611,9.5187920796559,10.3564074719507,9.39759821870082,28.6401185404534,13.1279437336171,11.9958485604841,8.7484326065659,12.1271211688392,11.3548533148012,19.0158728402597,34.4664910374651,9.94672579539312,12.8318823558875,44.1150912291717,47.9138997881562,15.6992373346178,18.0349754598236,20.222923587781,18.0823752868824,21.6263840628196,29.57402413873,32.0302786716117,41.2097223593044,30.9227674657288,32.2593607008809,18.0126338758062,10.1362607645082,10.8873614594717,9.48422007737904,12.3528420010562,12.1195626416572,13.2214994471966,12.2582307554899,10.7024436945036,14.403086457795,9.98179232854721,15.0085136339219,9.42876048075229,15.5446279901487,107.696932217225,12.2092274355736,6.6388253891012,8.73000005093208,46.9450713498223,18.9559300205694,27.655895264357,53.5920947697665,40.1257683228291,170.555056470354,143.161148553732,142.07808733297,122.015759464018,158.254062067018,154.100355067499,147.154905050534,162.115633160719,154.974703872598,168.789861631093,14.5302286617847,14.3648954424371,18.4392294214465,16.0450433265074,23.0574478890781,22.9804385562518,22.2246727801615,28.2268028417285,24.389859928978,24.2589323293246,21.7992197905606,22.4465346249431,19.5710750612054,20.6801242267728,21.6531717962662,21.4332161077383,22.1339062554674,20.0625589282253,24.7251540481984,23.699026141638,23.3151091622082,24.4916612499886,23.6051828047848,23.4007730778049,22.209813778018,22.761329522861,26.7074840394248,20.2563677807139,22.0002664430296,25.2514022245982,22.5406534435931,19.405383027986,22.5077073743329,20.4516630365475,28.9359916471712,30.9765116643053,24.7967504952133,37.1726923503556,60.6384012658234,55.8096290372374,59.3581659188279
|short_description=p1@Tef
}}

Revision as of 11:18, 13 September 2013

Short description:p1@Tef
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tef_5end
Coexpression cluster:MCL_coexpression_mm9:780
Association with transcript: 34bp_to_ENSMUST00000023024, NM_017376, uc007wxk.2_5end
EntrezGene:Tef
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tef

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G731.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I557.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I692.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I354.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I495.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.36
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F130.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.87
GP2+ M cell, pool1.CNhs13228.11845-124H951.68
GP2+ M cell, pool2.CNhs13231.11846-124I140.92
GP2+ M cell, pool3.CNhs13240.11847-124I229.74
Ileum epithelium, pool1.CNhs13199.10252-104B925.65
Ileum epithelium, pool2.CNhs13232.10253-104C124.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I329.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G621.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D828.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C331.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C430.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.66
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.22
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E323.80
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D131.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C749.49
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E753.40
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D254.71
Mouse Microglia, donor1.CNhs12629.11718-123C850.03
Mouse Microglia, donor2.CNhs12634.11736-123E854.56
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D544.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3120.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F376.48
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D779.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E472.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E572.60
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I675.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.20
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.78
Mouse Schwann, donor1.CNhs12507.11728-123D918.25
Mouse Schwann, donor2.CNhs12573.11746-123F922.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C451.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F445.48
Mouse hepatocyte, donor8.CNhs13091.11824-124F692.74
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A764.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I829.68
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H148.76
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8175.82
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6170.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B658.80
accessory axillary lymph node, adult.CNhs10475.1063-29H913.46
adrenal gland, adult.CNhs10508.49-24D759.82
adrenal gland, embryo E14.CNhs11038.406-44C514.40
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F520.65
adrenal gland, neonate N00.CNhs11191.1311-23C131.51
adrenal gland, neonate N25.CNhs11223.1377-27I327.65
amnion, adult pregnant day17.5.CNhs10488.583-22A829.91
aorta, adult.CNhs10498.46-23H190.09
bone (os femoris), adult.CNhs10483.56-12G249.54
bone (os femoris), neonate N02.CNhs11227.1985-43F533.32
bone (os femoris), neonate N16.CNhs11225.1525-43A639.31
bone (os femoris), neonate N20.CNhs11195.1350-25C327.15
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B2106.57
cerebellum, neonate N30.CNhs11135.1395-42I2107.45
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A4102.46
corpus striatum, adult.CNhs10487.19-21D8164.24
corpus striatum, neonate N00.CNhs11226.630-43F136.57
cortex, adult.CNhs10473.12-14D5155.05
cortex, neonate N30.CNhs11107.1392-42F2142.69
diencephalon, adult.CNhs10482.20-12F285.82
diencephalon, neonate N30.CNhs11201.1388-42B292.64
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.65
epididymis, adult.CNhs10490.58-23B234.62
eyeball, adult.CNhs10484.31-12G440.62
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C631.57
eyeball, neonate N01.CNhs11140.1532-43E732.16
eyeball, neonate N02.CNhs11205.1551-44G828.49
eyeball, neonate N16.CNhs11188.777-19A267.26
forelimb, embryo E11.CNhs10596.335-25E213.58
forelimb, embryo E12.CNhs10600.359-14H218.34
forelimb, embryo E13.CNhs10589.384-1E216.36
forelimb, embryo E14.CNhs10577.413-26A816.88
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B519.55
gonad, embryo E13.CNhs11044.1564-45I618.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F519.47
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D418.94
heart, embryo E15.CNhs11017.431-16C819.68
heart, embryo E16.CNhs11021.457-17C618.36
heart, embryo E17.CNhs11025.479-18E523.02
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E333.28
heart, neonate N03.CNhs11221.1349-25I221.89
heart, neonate N10.CNhs11118.749-24G143.18
heart, neonate N16.CNhs11209.782-15G173.29
heart, neonate N20.CNhs11127.821-26I660.09
heart, neonate N25.CNhs11196.1351-25D325.03
heart, neonate N30.CNhs11202.1390-42D238.25
hippocampus, adult.CNhs10478.13-16E8125.33
hippocampus, neonate N00.CNhs11228.627-43G141.88
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A330.94
intestine, embryo E12.CNhs11019.1251-16I514.08
intestine, embryo E13.CNhs11010.381-16D514.17
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F714.46
intestine, neonate N00.CNhs11126.644-26D131.79
intestine, neonate N01.CNhs11192.1322-23E920.09
intestine, neonate N06.CNhs11102.688-20B829.91
intestine, neonate N07.CNhs11095.720-20F232.63
intestine, neonate N10.CNhs11098.755-23A531.58
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I920.10
kidney, embryo E15.CNhs10997.434-16F812.68
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I216.70
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G728.83
kidney, neonate N10.CNhs11206.758-6D532.69
kidney, neonate N20.CNhs11113.832-19I170.11
kidney, neonate N25.CNhs11122.1353-25F317.11
kidney, neonate N30.CNhs11203.1385-42H119.87
liver, adult pregnant day01.CNhs10466.508-5B298.13
liver, embryo E12.CNhs10601.355-15F89.68
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F456.10
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A860.38
liver, neonate N07.CNhs11103.716-20H248.38
liver, neonate N10.CNhs11115.751-24B940.56
liver, neonate N20.CNhs11220.823-25A322.73
liver, neonate N25.CNhs11198.1368-26H110.76
liver, neonate N30.CNhs11106.1382-42D145.83
lung, adult.CNhs10474.28-22B170.76
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F814.01
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B618.07
lung, embryo E17.CNhs10605.480-44A618.09
lung, embryo E18.CNhs10583.1287-20I625.23
lung, neonate N00.CNhs11224.640-42C632.20
lung, neonate N06.CNhs11212.683-20E536.26
lung, neonate N07.CNhs11111.715-19A340.53
lung, neonate N10.CNhs11219.750-23E638.59
lung, neonate N20.CNhs11109.822-18A467.68
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H213.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A145.24
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A129.37
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H229.80
medulla oblongata, adult.CNhs10477.17-12C284.13
medulla oblongata, neonate N30.CNhs11200.1396-42A365.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2127.75
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.99
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E342.87
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.53
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.86
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D535.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D645.85
olfactory brain, adult.CNhs10489.18-22I9109.89
ovary, adult.CNhs10507.91-2I745.70
ovary, embryo E18.CNhs11040.505-44H720.12
ovary, neonate N00.CNhs11217.1299-22I430.79
oviduct, adult pregnant day01.CNhs10500.988-6G657.57
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G924.03
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D821.03
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C722.25
pituitary gland, embryo E14.CNhs11037.398-44A524.86
pituitary gland, embryo E15.CNhs10592.427-16B925.00
pituitary gland, embryo E16.CNhs11036.449-43F626.40
pituitary gland, embryo E17.CNhs11039.1265-44F529.95
pituitary gland, neonate N00.CNhs11190.1308-22E947.50
placenta, adult pregnant day10.CNhs10472.539-13I718.54
placenta, adult pregnant day17.CNhs10464.577-18G323.94
prostate, adult.CNhs10470.859-1F820.29
skin, adult.CNhs10492.30-1C388.38
skin, neonate N00.CNhs11124.650-25G444.56
skin, neonate N03.CNhs11215.662-22H325.75
skin, neonate N06.CNhs11097.693-20I529.96
skin, neonate N10.CNhs11108.762-6C432.50
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C980.47
spleen, adult.CNhs10465.25-2G212.64
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D19.98
spleen, neonate N20.CNhs11112.824-19H110.25
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.40
stomach, adult.CNhs10503.33-1H628.64
stomach, embryo E12.CNhs10588.356-43E313.13
stomach, embryo E15.CNhs10603.1252-16G812.00
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C611.35
stomach, neonate N03.CNhs11193.1340-24B819.02
stomach, neonate N07.CNhs11210.718-18A934.47
stomach, neonate N25.CNhs11104.1355-25E49.95
stomach, neonate N30.CNhs11134.1386-42I112.83
submandibular gland, adult.CNhs10469.59-29C144.12
testis, adult.CNhs10504.57-7G547.91
testis, embryo E13.CNhs11031.389-23F515.70
testis, embryo E15.CNhs11034.443-27C518.03
testis, embryo E16.CNhs11033.470-26G520.22
testis, embryo E17.CNhs11029.486-18I518.08
testis, embryo E18.CNhs11027.503-18G521.63
testis, neonate N00.CNhs11189.1300-22B729.57
testis, neonate N07.CNhs11222.726-26I432.03
testis, neonate N10.CNhs11204.763-44D941.21
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E232.26
thymus, adult.CNhs10471.38-12B518.01
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I210.89
thymus, embryo E16.CNhs11002.456-26C59.48
thymus, embryo E17.CNhs10581.478-18C112.35
thymus, embryo E18.CNhs10595.1273-19G412.12
thymus, neonate N02.CNhs11181.1541-43F813.22
thymus, neonate N03.CNhs11137.2104-43C712.26
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D314.40
thymus, neonate N10.CNhs11194.748-24E49.98
thymus, neonate N20.CNhs11186.820-7A215.01
thymus, neonate N25.CNhs11125.1362-25G79.43
thymus, neonate N30.CNhs11132.1393-42G215.54
tongue, adult.CNhs10499.32-1B4107.70
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.73
urinary bladder, adult.CNhs10481.879-12E446.95
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E527.66
vagina, adult.CNhs10502.89-27D553.59
vesicular gland, adult.CNhs10491.51-27F840.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1170.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2143.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3142.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7122.02
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4158.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5154.10
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6147.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7162.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8154.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9168.79
whole body, embryo E11.CNhs11014.324-5I814.53
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H218.44
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B123.06
whole body, embryo E16.CNhs10514.453-14F222.98
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.70
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.61
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.45
whole body, embryo E17.5.CNhs10513.490-9F928.94
whole body, embryo E17.CNhs10517.475-3I530.98
whole body, embryo E18.CNhs10516.493-3B324.80
whole body, neonate N00.CNhs10525.657-19C237.17
whole body, neonate N01.CNhs10576.659-23C660.64
whole body, neonate N06.CNhs10515.692-21D155.81
whole body, neonate N10.CNhs10518.761-6B459.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.60e-1395
ectoderm1.60e-1395
presumptive ectoderm1.60e-1395
central nervous system4.17e-1373
nervous system1.16e-1275
regional part of nervous system4.79e-1154
brain4.25e-1047
future brain4.25e-1047
neural tube4.34e-1052
neural rod4.34e-1052
future spinal cord4.34e-1052
neural keel4.34e-1052
ecto-epithelium6.01e-1073
regional part of brain1.37e-0946
neurectoderm4.19e-0964
neural plate4.19e-0964
presumptive neural plate4.19e-0964
anatomical conduit1.61e-08122
occipital lobe6.12e-0810
visual cortex6.12e-0810
neocortex6.12e-0810
adult organism8.79e-0851
structure with developmental contribution from neural crest1.14e-0792
anterior neural tube2.35e-0740
tube6.49e-07114
regional part of forebrain6.60e-0739
forebrain6.60e-0739
future forebrain6.60e-0739
regional part of cerebral cortex9.21e-0717







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