FFCP PHASE1:Mm9::chr6:122436142..122436198,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108653|HGNC=|MCL_coexpression_id=2275|UniProt=Q80WS1|association_with_transcript=124bp_to_NM_027664,uc009dpg.1_5end|description=CAGE_peak_4_at_Rimklb_5end|id=chr6:122436142..122436198,-|ontology_enrichment_celltype=CL:0000117!2.36e-12!23;CL:0000337!2.36e-12!23;CL:0000540!2.32e-11!33;CL:0000047!2.32e-11!33;CL:0000031!2.32e-11!33;CL:0000404!2.32e-11!33;CL:0000221!2.03e-10!44;CL:0000133!2.03e-10!44;CL:0002319!7.37e-10!43;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-16,23;CL:0000337,3.30e-16,23;CL:0000540,6.73e-12,33;CL:0000047,6.73e-12,33;CL:0000031,6.73e-12,33;CL:0000404,6.73e-12,33;CL:0000221,2.57e-10,44;CL:0000133,2.57e-10,44;CL:0002319,1.63e-09,43;CL:0000393,3.91e-09,39;CL:0000211,3.91e-09,39;CL:0002609,2.44e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.75e-18!71;UBERON:0003075!2.75e-18!71;UBERON:0007284!2.75e-18!71;UBERON:0001017!9.60e-17!73;UBERON:0005743!9.60e-17!73;UBERON:0000033!1.48e-16!63;UBERON:0000073!1.74e-16!75;UBERON:0001016!1.74e-16!75;UBERON:0003056!3.41e-16!49;UBERON:0004121!9.59e-16!102;UBERON:0000924!9.59e-16!102;UBERON:0006601!9.59e-16!102;UBERON:0001049!1.13e-15!52;UBERON:0005068!1.13e-15!52;UBERON:0006241!1.13e-15!52;UBERON:0007135!1.13e-15!52;UBERON:0002020!3.75e-13!34;UBERON:0002616!5.24e-12!49;UBERON:0002780!2.05e-11!39;UBERON:0001890!2.05e-11!39;UBERON:0006240!2.05e-11!39;UBERON:0000955!2.07e-11!50;UBERON:0006238!2.07e-11!50;UBERON:0003080!2.25e-11!40;UBERON:0002791!7.03e-10!29;UBERON:0003528!7.03e-10!29;UBERON:0001893!7.03e-10!29;UBERON:0000153!6.24e-09!94;UBERON:0007811!2.96e-08!86;UBERON:0000020!4.31e-07!12;UBERON:0001032!4.31e-07!12;UBERON:0004456!4.31e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.40e-18,64;UBERON:0003075,7.40e-18,64;UBERON:0007284,7.40e-18,64;UBERON:0010371,1.23e-16,73;UBERON:0004121,5.60e-15,95;UBERON:0000924,5.60e-15,95;UBERON:0006601,5.60e-15,95;UBERON:0003056,2.98e-13,49;UBERON:0002020,3.38e-13,34;UBERON:0001017,4.98e-12,73;UBERON:0001049,9.67e-12,52;UBERON:0005068,9.67e-12,52;UBERON:0006241,9.67e-12,52;UBERON:0007135,9.67e-12,52;UBERON:0001016,1.93e-11,75;UBERON:0000073,5.72e-11,54;UBERON:0010314,7.38e-11,92;UBERON:0000020,9.27e-10,12;UBERON:0001032,9.27e-10,12;UBERON:0004456,9.27e-10,12;UBERON:0000970,7.96e-09,9;UBERON:0000019,7.96e-09,9;UBERON:0000047,7.96e-09,9;UBERON:0010312,7.96e-09,9;UBERON:0004088,7.96e-09,9;UBERON:0002104,7.96e-09,9;UBERON:0001456,7.96e-09,9;UBERON:0003072,7.96e-09,9;UBERON:0004128,7.96e-09,9;UBERON:0003071,7.96e-09,9;UBERON:0000033,8.40e-09,13;UBERON:0005085,8.40e-09,13;UBERON:0003528,1.89e-08,29;UBERON:0002791,1.89e-08,29;UBERON:0001893,1.89e-08,29;UBERON:0002240,2.17e-08,6;UBERON:0005174,2.17e-08,6;UBERON:0001137,2.17e-08,6;UBERON:0002780,9.45e-08,39;UBERON:0001890,9.45e-08,39;UBERON:0006240,9.45e-08,39;UBERON:0001948,1.09e-07,5;UBERON:0002315,1.09e-07,5;UBERON:0000369,1.67e-07,5;UBERON:0002435,1.67e-07,5;UBERON:0000204,1.67e-07,5;UBERON:0010082,1.67e-07,5;UBERON:0003080,2.00e-07,40;UBERON:0002616,3.15e-07,46;UBERON:0000955,5.92e-07,47;UBERON:0006238,5.92e-07,47;UBERON:0001444,7.11e-07,11|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,9.3065571995415,9.52183762689659,10.1413024560989,0,0,0,0,0,0.898800331555214,1.53687322128622,1.65903379693564,2.56511282830212,3.36519938162211,4.85606673486466,4.8591079009355,3.42974237801871,3.64212789869298,1.83843757322004,0,0.766124028511126,1.22885226604995,11.7378796079873,11.2529801630964,12.5019208933622,0.837548997004143,0.56276261003168,0.61119299110724,4.41942878210502,5.55249555116501,5.96478226640962,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0.913396434936424,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,1.83000241127451,2.76439574648302,0.521472960576829,0.255715457330331,0.41557608911912,0.648965052271031,0.916554274652847,0.124406970610093,1.0108910337347,0.420883711772948,2.47228841629137,4.59804208866946,3.60124259610698,4.52114453507145,5.10273743634959,4.61209393025459,3.5606655332697,1.55222022443409,2.58681591519411,3.02569728268511,2.11141348996739,1.31517439456545,0.556094498451196,0,0,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,3.91037527041281,0,0,1.06644125267617,2.09013004674395,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.948339504765408,1.02823661348756,1.1270773567308,0.610953983535943,0.387904974335251,0.561086559122548,0.189709611372772,0,0,0,0,0.500535317148282,0.196558995113203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| ||
|EntrezGene=108653 | |||
|HGNC= | |||
|MCL_coexpression_id=2275 | |||
|UniProt=Q80WS1 | |||
|association_with_transcript=124bp_to_NM_027664,uc009dpg.1_5end | |||
|description=CAGE_peak_4_at_Rimklb_5end | |||
|id=chr6:122436142..122436198,- | |||
|ontology_enrichment_celltype=CL:0000117!2.36e-12!23;CL:0000337!2.36e-12!23;CL:0000540!2.32e-11!33;CL:0000047!2.32e-11!33;CL:0000031!2.32e-11!33;CL:0000404!2.32e-11!33;CL:0000221!2.03e-10!44;CL:0000133!2.03e-10!44;CL:0002319!7.37e-10!43;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-16,23;CL:0000337,3.30e-16,23;CL:0000540,6.73e-12,33;CL:0000047,6.73e-12,33;CL:0000031,6.73e-12,33;CL:0000404,6.73e-12,33;CL:0000221,2.57e-10,44;CL:0000133,2.57e-10,44;CL:0002319,1.63e-09,43;CL:0000393,3.91e-09,39;CL:0000211,3.91e-09,39;CL:0002609,2.44e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.75e-18!71;UBERON:0003075!2.75e-18!71;UBERON:0007284!2.75e-18!71;UBERON:0001017!9.60e-17!73;UBERON:0005743!9.60e-17!73;UBERON:0000033!1.48e-16!63;UBERON:0000073!1.74e-16!75;UBERON:0001016!1.74e-16!75;UBERON:0003056!3.41e-16!49;UBERON:0004121!9.59e-16!102;UBERON:0000924!9.59e-16!102;UBERON:0006601!9.59e-16!102;UBERON:0001049!1.13e-15!52;UBERON:0005068!1.13e-15!52;UBERON:0006241!1.13e-15!52;UBERON:0007135!1.13e-15!52;UBERON:0002020!3.75e-13!34;UBERON:0002616!5.24e-12!49;UBERON:0002780!2.05e-11!39;UBERON:0001890!2.05e-11!39;UBERON:0006240!2.05e-11!39;UBERON:0000955!2.07e-11!50;UBERON:0006238!2.07e-11!50;UBERON:0003080!2.25e-11!40;UBERON:0002791!7.03e-10!29;UBERON:0003528!7.03e-10!29;UBERON:0001893!7.03e-10!29;UBERON:0000153!6.24e-09!94;UBERON:0007811!2.96e-08!86;UBERON:0000020!4.31e-07!12;UBERON:0001032!4.31e-07!12;UBERON:0004456!4.31e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.40e-18,64;UBERON:0003075,7.40e-18,64;UBERON:0007284,7.40e-18,64;UBERON:0010371,1.23e-16,73;UBERON:0004121,5.60e-15,95;UBERON:0000924,5.60e-15,95;UBERON:0006601,5.60e-15,95;UBERON:0003056,2.98e-13,49;UBERON:0002020,3.38e-13,34;UBERON:0001017,4.98e-12,73;UBERON:0001049,9.67e-12,52;UBERON:0005068,9.67e-12,52;UBERON:0006241,9.67e-12,52;UBERON:0007135,9.67e-12,52;UBERON:0001016,1.93e-11,75;UBERON:0000073,5.72e-11,54;UBERON:0010314,7.38e-11,92;UBERON:0000020,9.27e-10,12;UBERON:0001032,9.27e-10,12;UBERON:0004456,9.27e-10,12;UBERON:0000970,7.96e-09,9;UBERON:0000019,7.96e-09,9;UBERON:0000047,7.96e-09,9;UBERON:0010312,7.96e-09,9;UBERON:0004088,7.96e-09,9;UBERON:0002104,7.96e-09,9;UBERON:0001456,7.96e-09,9;UBERON:0003072,7.96e-09,9;UBERON:0004128,7.96e-09,9;UBERON:0003071,7.96e-09,9;UBERON:0000033,8.40e-09,13;UBERON:0005085,8.40e-09,13;UBERON:0003528,1.89e-08,29;UBERON:0002791,1.89e-08,29;UBERON:0001893,1.89e-08,29;UBERON:0002240,2.17e-08,6;UBERON:0005174,2.17e-08,6;UBERON:0001137,2.17e-08,6;UBERON:0002780,9.45e-08,39;UBERON:0001890,9.45e-08,39;UBERON:0006240,9.45e-08,39;UBERON:0001948,1.09e-07,5;UBERON:0002315,1.09e-07,5;UBERON:0000369,1.67e-07,5;UBERON:0002435,1.67e-07,5;UBERON:0000204,1.67e-07,5;UBERON:0010082,1.67e-07,5;UBERON:0003080,2.00e-07,40;UBERON:0002616,3.15e-07,46;UBERON:0000955,5.92e-07,47;UBERON:0006238,5.92e-07,47;UBERON:0001444,7.11e-07,11 | |||
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|short_description=p4@Rimklb | |||
}} |
Revision as of 08:46, 14 September 2013
Short description: | p4@Rimklb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rimklb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2275 |
Association with transcript: | 124bp_to_NM_027664, uc009dpg.1_5end |
EntrezGene: | Rimklb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.30e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.30e-16 | 23 |
neuron | 6.73e-12 | 33 |
neuronal stem cell | 6.73e-12 | 33 |
neuroblast | 6.73e-12 | 33 |
electrically signaling cell | 6.73e-12 | 33 |
ectodermal cell | 2.57e-10 | 44 |
neurectodermal cell | 2.57e-10 | 44 |
neural cell | 1.63e-09 | 43 |
electrically responsive cell | 3.91e-09 | 39 |
electrically active cell | 3.91e-09 | 39 |
neuron of cerebral cortex | 2.44e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.