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FFCP PHASE1:Mm9::chr9:50507105..50507133,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=330938|HGNC=|MCL_coexpression_id=1|UniProt=Q80Y83|association_with_transcript=333bp_to_ENSMUST00000141919,uc009pkb.1_5end|description=CAGE_peak_2_at_Dixdc1_5end|id=chr9:50507105..50507133,-|ontology_enrichment_celltype=CL:0000117!1.05e-07!23;CL:0000337!1.05e-07!23;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39;CL:0000540!9.00e-07!33;CL:0000047!9.00e-07!33;CL:0000031!9.00e-07!33;CL:0000404!9.00e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.67e-08,23;CL:0000337,6.67e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.33e-15!73;UBERON:0005743!1.33e-15!73;UBERON:0001049!3.60e-15!52;UBERON:0005068!3.60e-15!52;UBERON:0006241!3.60e-15!52;UBERON:0007135!3.60e-15!52;UBERON:0004121!5.35e-15!102;UBERON:0000924!5.35e-15!102;UBERON:0006601!5.35e-15!102;UBERON:0000073!5.55e-15!75;UBERON:0001016!5.55e-15!75;UBERON:0002346!6.00e-15!71;UBERON:0003075!6.00e-15!71;UBERON:0007284!6.00e-15!71;UBERON:0000955!6.36e-15!50;UBERON:0006238!6.36e-15!50;UBERON:0000033!1.08e-14!63;UBERON:0002616!2.32e-14!49;UBERON:0004111!5.01e-13!122;UBERON:0002020!6.60e-13!34;UBERON:0000025!1.24e-12!114;UBERON:0003056!5.54e-11!49;UBERON:0002791!6.22e-11!29;UBERON:0003528!6.22e-11!29;UBERON:0001893!6.22e-11!29;UBERON:0003080!9.48e-11!40;UBERON:0002780!3.26e-10!39;UBERON:0001890!3.26e-10!39;UBERON:0006240!3.26e-10!39;UBERON:0000956!1.24e-07!21;UBERON:0001869!1.24e-07!21;UBERON:0000203!1.24e-07!21;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.07e-16,54;UBERON:0001049,1.31e-14,52;UBERON:0005068,1.31e-14,52;UBERON:0006241,1.31e-14,52;UBERON:0007135,1.31e-14,52;UBERON:0001017,4.21e-14,73;UBERON:0002346,1.18e-13,64;UBERON:0003075,1.18e-13,64;UBERON:0007284,1.18e-13,64;UBERON:0002020,1.40e-13,34;UBERON:0001016,3.69e-13,75;UBERON:0000955,3.18e-12,47;UBERON:0006238,3.18e-12,47;UBERON:0004111,5.90e-12,122;UBERON:0000025,6.13e-12,114;UBERON:0002616,1.25e-11,46;UBERON:0003528,2.83e-11,29;UBERON:0002791,2.83e-11,29;UBERON:0001893,2.83e-11,29;UBERON:0004121,5.16e-11,95;UBERON:0000924,5.16e-11,95;UBERON:0006601,5.16e-11,95;UBERON:0010371,6.54e-11,73;UBERON:0003080,2.85e-10,40;UBERON:0003056,2.87e-10,49;UBERON:0010314,1.01e-09,92;UBERON:0002780,1.11e-09,39;UBERON:0001890,1.11e-09,39;UBERON:0006240,1.11e-09,39;UBERON:0002021,1.05e-08,10;UBERON:0000411,1.05e-08,10;UBERON:0001950,1.05e-08,10;UBERON:0000956,1.85e-07,21;UBERON:0001869,1.85e-07,21;UBERON:0000203,1.85e-07,21|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.52065396829272,1.28482726513177,0.782391344348039,0.65407546914134,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,2.29226751951005,1.54701627683233,2.22548106945558,1.5869729378161,1.26766280701236,0,1.77858959222228,0,0,0,0.898800331555214,0.768436610643109,1.65903379693564,3.37514845829227,1.26194976810829,4.28476476605705,6.18431914664518,2.32732518508413,0.862609239164127,0.919218786610021,26.4278114398533,34.4755812830007,38.2480267808046,2.2420668914133,2.10421580285542,1.56274011167028,31.547678887156,27.0126052815206,29.795658316478,3.83017161115768,3.98640706237488,2.42319279572891,0.37863096666592,0.377857800533928,4.63783181922684,2.58127163094416,0,5.39703191637817,4.54843492213368,4.03224198387602,2.24711072210803,1.02258193546835,0.779358013808606,0,0.422530259330042,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,0,2.8545969929765,0,0.890652834388949,1.04091196059682,1.82679286987285,0.691846491768175,1.20578112442098,3.41007250693544,0.753999547978053,1.23597483867187,0.86759614151947,0,1.61766849947409,1.10420759230197,0.969750506270444,11.1835056730873,18.737971008739,16.3368431314495,0,0,0,0,24.5656648623909,37.972550033946,3.76963056338593,19.9897968221118,25.0601148183724,29.7136903720171,30.0146336675352,2.13862664085664,0.995255764880744,0,3.99839526184301,0.260240885925407,0,0.360124259610698,0.90422890701429,3.12967896096108,2.8185018462667,3.46696380870997,12.4177617954728,0,0.189106080167819,0,0.876782929710299,1.39023624612799,2.43776516565517,2.67516777330327,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.232533944750408,0.804820204198858,1.40118410840603,0.329119699826961,0.32833492815819,1.86458261955468,1.46199987425332,0.439100230582101,1.61047702512446,29.6508827475419,4.6307075570678,0,0,0,0,0.902072229254653,0.80673409849337,0.444756087689741,0.760902504450237,0.949058123089023,2.30578536613615,1.00534083520108,2.38747766449381,1.9496408711912,1.79763881730844,2.80979464837102,3.38540164532424,0.569003702859245,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.632365371242573,1.32849133181642,1.09899109488962,1.35736880313981,10.0793893209631,0,0,0,0,0,0,0,0.324270453550071,0.27456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|EntrezGene=330938
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q80Y83
|association_with_transcript=333bp_to_ENSMUST00000141919,uc009pkb.1_5end
|description=CAGE_peak_2_at_Dixdc1_5end
|id=chr9:50507105..50507133,-
|ontology_enrichment_celltype=CL:0000117!1.05e-07!23;CL:0000337!1.05e-07!23;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39;CL:0000540!9.00e-07!33;CL:0000047!9.00e-07!33;CL:0000031!9.00e-07!33;CL:0000404!9.00e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.67e-08,23;CL:0000337,6.67e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.33e-15!73;UBERON:0005743!1.33e-15!73;UBERON:0001049!3.60e-15!52;UBERON:0005068!3.60e-15!52;UBERON:0006241!3.60e-15!52;UBERON:0007135!3.60e-15!52;UBERON:0004121!5.35e-15!102;UBERON:0000924!5.35e-15!102;UBERON:0006601!5.35e-15!102;UBERON:0000073!5.55e-15!75;UBERON:0001016!5.55e-15!75;UBERON:0002346!6.00e-15!71;UBERON:0003075!6.00e-15!71;UBERON:0007284!6.00e-15!71;UBERON:0000955!6.36e-15!50;UBERON:0006238!6.36e-15!50;UBERON:0000033!1.08e-14!63;UBERON:0002616!2.32e-14!49;UBERON:0004111!5.01e-13!122;UBERON:0002020!6.60e-13!34;UBERON:0000025!1.24e-12!114;UBERON:0003056!5.54e-11!49;UBERON:0002791!6.22e-11!29;UBERON:0003528!6.22e-11!29;UBERON:0001893!6.22e-11!29;UBERON:0003080!9.48e-11!40;UBERON:0002780!3.26e-10!39;UBERON:0001890!3.26e-10!39;UBERON:0006240!3.26e-10!39;UBERON:0000956!1.24e-07!21;UBERON:0001869!1.24e-07!21;UBERON:0000203!1.24e-07!21;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.07e-16,54;UBERON:0001049,1.31e-14,52;UBERON:0005068,1.31e-14,52;UBERON:0006241,1.31e-14,52;UBERON:0007135,1.31e-14,52;UBERON:0001017,4.21e-14,73;UBERON:0002346,1.18e-13,64;UBERON:0003075,1.18e-13,64;UBERON:0007284,1.18e-13,64;UBERON:0002020,1.40e-13,34;UBERON:0001016,3.69e-13,75;UBERON:0000955,3.18e-12,47;UBERON:0006238,3.18e-12,47;UBERON:0004111,5.90e-12,122;UBERON:0000025,6.13e-12,114;UBERON:0002616,1.25e-11,46;UBERON:0003528,2.83e-11,29;UBERON:0002791,2.83e-11,29;UBERON:0001893,2.83e-11,29;UBERON:0004121,5.16e-11,95;UBERON:0000924,5.16e-11,95;UBERON:0006601,5.16e-11,95;UBERON:0010371,6.54e-11,73;UBERON:0003080,2.85e-10,40;UBERON:0003056,2.87e-10,49;UBERON:0010314,1.01e-09,92;UBERON:0002780,1.11e-09,39;UBERON:0001890,1.11e-09,39;UBERON:0006240,1.11e-09,39;UBERON:0002021,1.05e-08,10;UBERON:0000411,1.05e-08,10;UBERON:0001950,1.05e-08,10;UBERON:0000956,1.85e-07,21;UBERON:0001869,1.85e-07,21;UBERON:0000203,1.85e-07,21
|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.52065396829272,1.28482726513177,0.782391344348039,0.65407546914134,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,2.29226751951005,1.54701627683233,2.22548106945558,1.5869729378161,1.26766280701236,0,1.77858959222228,0,0,0,0.898800331555214,0.768436610643109,1.65903379693564,3.37514845829227,1.26194976810829,4.28476476605705,6.18431914664518,2.32732518508413,0.862609239164127,0.919218786610021,26.4278114398533,34.4755812830007,38.2480267808046,2.2420668914133,2.10421580285542,1.56274011167028,31.547678887156,27.0126052815206,29.795658316478,3.83017161115768,3.98640706237488,2.42319279572891,0.37863096666592,0.377857800533928,4.63783181922684,2.58127163094416,0,5.39703191637817,4.54843492213368,4.03224198387602,2.24711072210803,1.02258193546835,0.779358013808606,0,0.422530259330042,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,0,2.8545969929765,0,0.890652834388949,1.04091196059682,1.82679286987285,0.691846491768175,1.20578112442098,3.41007250693544,0.753999547978053,1.23597483867187,0.86759614151947,0,1.61766849947409,1.10420759230197,0.969750506270444,11.1835056730873,18.737971008739,16.3368431314495,0,0,0,0,24.5656648623909,37.972550033946,3.76963056338593,19.9897968221118,25.0601148183724,29.7136903720171,30.0146336675352,2.13862664085664,0.995255764880744,0,3.99839526184301,0.260240885925407,0,0.360124259610698,0.90422890701429,3.12967896096108,2.8185018462667,3.46696380870997,12.4177617954728,0,0.189106080167819,0,0.876782929710299,1.39023624612799,2.43776516565517,2.67516777330327,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.232533944750408,0.804820204198858,1.40118410840603,0.329119699826961,0.32833492815819,1.86458261955468,1.46199987425332,0.439100230582101,1.61047702512446,29.6508827475419,4.6307075570678,0,0,0,0,0.902072229254653,0.80673409849337,0.444756087689741,0.760902504450237,0.949058123089023,2.30578536613615,1.00534083520108,2.38747766449381,1.9496408711912,1.79763881730844,2.80979464837102,3.38540164532424,0.569003702859245,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.632365371242573,1.32849133181642,1.09899109488962,1.35736880313981,10.0793893209631,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,2.23284568601102,0.312037673114561,2.27320990152401,1.61457672169721,12.0610880340842,14.965008403495,0.37898282354097,0,0,0.938760993154008,1.00503754465089,3.09456733151818,4.48807390072937,4.41378403497335,4.65075848262427,3.50800491046472,6.06294264448231,4.83517949224508,10.8486793936134,0,0,0.983528546038072,0.827810238914197,33.5550733074485,40.2036085011257,1.47541450839008,1.00988370881749,0.631016438832513,0.390438744296638,1.50796378412959,0.716906393857656,1.11399337041197,0.849229592366497,0,2.92255857911312,1.97643888973262,20.2432429345738,1.98716119291576,0.178065603667255,2.11753047159649,4.12425307431339,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,1.09060118843252,1.06949213515416,0.316036757935816,3.16255825724996,2.06271086496374,1.02131881726136,0,0.388076051348264,0.643011105094777,0.709360934569094,2.85390108163313,1.31639216481697,0.913394847343798,4.69343416127421,2.1183207086382,0.882113592219848,0.98931751764888,1.29171541356724,0.361877549568935,0.716234064018819,0.984845398470368,1.45740418314925,37.826761610144,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0.139951452323658,0,4.77335309007557,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,1.09181281873089,1.21377911746339,4.46328660916814,2.6175594198403,2.72191443912765,0,0.56369293868419,0,0.330916980914195,0.972255941720238,0.774958940866387,0.337912250981556,1.76035857968631,0.781226309063701,0.314578033277133,1.44950472495604,0.288030006257865,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,2.72076460338254,0,0,0.167884616364078,5.21611903886914,5.44279178808428,1.83151624267265,1.50057865355346,0.501572104035363,29.9318476587045,34.0640675015311,23.4887160510153,23.0283264340541,13.7016503954128,31.7265436903674,29.7009900101995,27.9199145999017,23.1102628581944,30.5478583933574,0.207574695168353,1.19707462020309,0.682934423016537,0.972426868273176,1.25767897576789,0.183843508450014,2.22246727801615,1.03017528619447,1.28367683836726,1.26348605881899,1.52087579934144,1.88626341386076,0.842773567228942,1.15245274328765,0.918967503289812,0.952587382566147,0.811190281613988,0.964546102318525,0.824171801606613,0,1.02860775715625,1.59728225543404,1.66905332963125,1.0174249164263,1.41164070622996,1.18460451048347,1.09756783723664,0.789209134313529,1.35804113845862,1.12228454331548,0.830445126869219,1.28055827088233,1.22769312950907,0.77468420592983,1.73615949883027,1.49886346762768,1.40358965067245,2.36358159453128,4.78220830172108,2.8676884485537,2.55054619182464
|short_description=p2@Dixdc1
}}

Revision as of 18:10, 14 September 2013

Short description:p2@Dixdc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dixdc1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 333bp_to_ENSMUST00000141919, uc009pkb.1_5end
EntrezGene:Dixdc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dixdc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.48
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.55
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.57
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F225.06
diencephalon, adult.CNhs10482.20-12F229.71
diencephalon, neonate N30.CNhs11201.1388-42B230.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E829.65
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B114.97
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H210.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C233.56
medulla oblongata, neonate N30.CNhs11200.1396-42A340.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I920.24
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C937.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.67e-0823
neuroblast (sensu Vertebrata)6.67e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.07e-1654
neural tube1.31e-1452
neural rod1.31e-1452
future spinal cord1.31e-1452
neural keel1.31e-1452
central nervous system4.21e-1473
neurectoderm1.18e-1364
neural plate1.18e-1364
presumptive neural plate1.18e-1364
gray matter1.40e-1334
nervous system3.69e-1375
brain3.18e-1247
future brain3.18e-1247
anatomical conduit5.90e-12122
tube6.13e-12114
regional part of brain1.25e-1146
brain grey matter2.83e-1129
regional part of telencephalon2.83e-1129
telencephalon2.83e-1129
ectoderm-derived structure5.16e-1195
ectoderm5.16e-1195
presumptive ectoderm5.16e-1195
ecto-epithelium6.54e-1173
anterior neural tube2.85e-1040
pre-chordal neural plate2.87e-1049
structure with developmental contribution from neural crest1.01e-0992
regional part of forebrain1.11e-0939
forebrain1.11e-0939
future forebrain1.11e-0939
occipital lobe1.05e-0810
visual cortex1.05e-0810
neocortex1.05e-0810
cerebral cortex1.85e-0721
cerebral hemisphere1.85e-0721
pallium1.85e-0721







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