FFCP PHASE1:Hg19::chr1:2485692..2485703,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:2485692..2485703,+ | |||
|id=chr1:2485692..2485703,+ | |||
|ontology_enrichment_celltype=CL:0000115!6.52e-32!35;CL:0002139!1.53e-26!24;CL:0002078!1.28e-24!44;CL:0002543!1.24e-20!6;CL:0000071!2.78e-20!18;CL:0002546!2.78e-20!18;CL:0000213!3.70e-18!57;CL:0000215!3.70e-18!57;CL:0002274!3.61e-16!5;CL:0000457!3.61e-16!5;CL:0002191!3.61e-16!5;CL:0000097!3.61e-16!5;CL:0000831!3.61e-16!5;CL:0002028!3.61e-16!5;CL:0002618!1.65e-15!3;CL:0002262!3.82e-11!2;CL:1000398!3.82e-11!2;CL:0000163!5.19e-09!9;CL:0005020!8.43e-08!6;CL:0002138!8.43e-08!6;CL:0005022!8.43e-08!6;CL:1000612!7.04e-07!7;CL:1000746!7.04e-07!7;CL:0000222!7.26e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002262;3.01e-40;2!CL:1000398;3.01e-40;2!CL:0000115;1.17e-23;36!CL:0002188;5.03e-17;5!CL:0000097;6.40e-17;5!CL:0002543;3.04e-14;6!CL:0002078;1.75e-12;45!CL:1000746;1.89e-12;7!CL:1000612;1.89e-12;7!CL:0000213;3.63e-10;58!CL:0000215;3.63e-10;58!CL:0000163;7.74e-10;9!CL:0002139;4.58e-08;24!CL:0002618;7.50e-08;3!CL:0002681;1.20e-07;12!CL:0002584;1.20e-07;12!CL:0000182;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.46e-40,2;CL:1000398,2.46e-40,2;CL:0000115,8.86e-27,36;CL:0002078,2.09e-21,45;CL:0002188,4.64e-17,5;CL:0000097,7.51e-17,5;CL:0002028,7.51e-17,5;CL:0000213,1.41e-16,58;CL:0000215,1.41e-16,58;CL:0002543,3.04e-14,6;CL:1000746,1.78e-12,7;CL:1000612,1.78e-12,7;CL:0000163,8.46e-10,9;CL:0002139,4.41e-08,24;CL:0002618,7.26e-08,3;CL:0000222,8.25e-08,121;CL:0002681,1.16e-07,12;CL:0002584,1.16e-07,12;CL:0000182,1.47e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.78e-20!18;UBERON:0004638!2.78e-20!18;UBERON:0004852!2.78e-20!18;UBERON:0000487!2.67e-16!22;UBERON:0006914!3.78e-14!25;UBERON:0001638!1.15e-13!9;UBERON:0003920!1.15e-13!9;UBERON:0004582!1.15e-13!9;UBERON:0000055!1.02e-10!69;UBERON:0003081!6.35e-10!216;UBERON:0002066!1.73e-09!5;UBERON:0004872!2.04e-09!84;UBERON:0002405!3.75e-09!115;UBERON:0002049!5.54e-09!79;UBERON:0007798!5.54e-09!79;UBERON:0002465!1.04e-07!10;UBERON:0003497!1.07e-07!3;UBERON:0003909!1.07e-07!3;UBERON:0003835!1.07e-07!3;UBERON:0001281!1.07e-07!3;UBERON:0001981!1.21e-07!60;UBERON:0007500!1.21e-07!60;UBERON:0004537!1.21e-07!60;UBERON:0006965!1.21e-07!60;UBERON:0000353!4.23e-07!17;UBERON:0003914!5.92e-07!118;UBERON:0002106!6.88e-07!3;UBERON:0004854!6.88e-07!3;UBERON:0009034!6.88e-07!3;UBERON:0002095!6.88e-07!3;UBERON:0004782!6.88e-07!3;UBERON:0003281!6.88e-07!3;UBERON:0009664!6.88e-07!3;UBERON:0002296!6.88e-07!3;UBERON:0005602!6.88e-07!3;UBERON:0001179!6.88e-07!3;UBERON:0006293!6.88e-07!3;UBERON:0000074!7.04e-07!7;UBERON:0001229!7.04e-07!7;UBERON:0001230!7.04e-07!7;UBERON:0005749!7.04e-07!7;UBERON:0004199!7.04e-07!7;UBERON:0004209!7.04e-07!7;UBERON:0004198!7.04e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.01e-40;2!UBERON:0003497;3.01e-40;2!UBERON:0003909;3.01e-40;2!UBERON:0003835;3.01e-40;2!UBERON:0001280;3.11e-27;3!UBERON:0004647;3.11e-27;3!UBERON:0000353;1.42e-21;15!UBERON:0000074;1.89e-12;7!UBERON:0001229;1.89e-12;7!UBERON:0003513;2.82e-12;7!UBERON:0002107;5.43e-10;19!UBERON:0006925;5.43e-10;19!UBERON:0001638;8.09e-10;9!UBERON:0003920;8.09e-10;9!UBERON:0004582;8.09e-10;9!UBERON:0002423;9.79e-08;25!UBERON:0001225;1.20e-07;12!UBERON:0008987;1.20e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.46e-40,2;UBERON:0003497,2.46e-40,2;UBERON:0003909,2.46e-40,2;UBERON:0003835,2.46e-40,2;UBERON:0001280,2.72e-27,3;UBERON:0004647,2.72e-27,3;UBERON:0005171,2.72e-27,3;UBERON:0000353,1.28e-21,15;UBERON:0000058,3.61e-17,19;UBERON:0002394,3.48e-14,6;UBERON:0003928,3.48e-14,6;UBERON:0010532,1.78e-12,7;UBERON:0000074,1.78e-12,7;UBERON:0001229,1.78e-12,7;UBERON:0001230,1.78e-12,7;UBERON:0003220,1.78e-12,7;UBERON:0005749,1.78e-12,7;UBERON:0004199,1.78e-12,7;UBERON:0004209,1.78e-12,7;UBERON:0004198,1.78e-12,7;UBERON:0003513,2.66e-12,7;UBERON:0005103,4.90e-11,8;UBERON:0000083,4.90e-11,8;UBERON:0009201,4.90e-11,8;UBERON:0006553,4.90e-11,8;UBERON:0003074,4.90e-11,8;UBERON:0003060,4.90e-11,8;UBERON:0002107,5.52e-10,19;UBERON:0006925,5.52e-10,19;UBERON:0008836,5.52e-10,19;UBERON:0000080,6.48e-10,9;UBERON:0002120,6.48e-10,9;UBERON:0004875,6.48e-10,9;UBERON:0005721,6.48e-10,9;UBERON:0005754,6.48e-10,9;UBERON:0007297,6.48e-10,9;UBERON:0001638,8.09e-10,9;UBERON:0003920,8.09e-10,9;UBERON:0004582,8.09e-10,9;UBERON:0002294,8.84e-10,9;UBERON:0001173,8.84e-10,9;UBERON:0004912,8.84e-10,9;UBERON:0005172,2.53e-09,54;UBERON:0005173,2.53e-09,54;UBERON:0008835,1.05e-08,22;UBERON:0003894,1.05e-08,22;UBERON:0002417,2.13e-08,60;UBERON:0000916,2.13e-08,60;UBERON:0009854,2.36e-08,23;UBERON:0004876,2.82e-08,11;UBERON:0003914,4.50e-08,117;UBERON:0007499,9.91e-08,25;UBERON:0009497,9.91e-08,25;UBERON:0000015,9.91e-08,25;UBERON:0002423,9.91e-08,25;UBERON:0006235,9.91e-08,25;UBERON:0004161,9.91e-08,25;UBERON:0001225,1.16e-07,12;UBERON:0008987,1.16e-07,12;UBERON:0003887,1.16e-07,12;UBERON:0009856,1.87e-07,26;UBERON:0000055,2.11e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,1.8089173141853,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,0.803697554556718,0.673588117878509,1.46394924628319,3.06633274931766,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,2.20121085033065,0.621984346622316,2.45003920808834,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55140557914773,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr1:2485692..2485703,+ | |||
}} |
Revision as of 15:55, 10 January 2014
Short description: | p@chr1:2485692..2485703, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2485692..2485703, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.46e-40 | 2 |
endothelial cell of hepatic sinusoid | 2.46e-40 | 2 |
endothelial cell | 8.86e-27 | 36 |
meso-epithelial cell | 2.09e-21 | 45 |
glomerular endothelial cell | 4.64e-17 | 5 |
mast cell | 7.51e-17 | 5 |
basophil mast progenitor cell | 7.51e-17 | 5 |
lining cell | 1.41e-16 | 58 |
barrier cell | 1.41e-16 | 58 |
vein endothelial cell | 3.04e-14 | 6 |
glomerular cell | 1.78e-12 | 7 |
kidney corpuscule cell | 1.78e-12 | 7 |
endocrine cell | 8.46e-10 | 9 |
endothelial cell of vascular tree | 4.41e-08 | 24 |
endothelial cell of umbilical vein | 7.26e-08 | 3 |
mesodermal cell | 8.25e-08 | 121 |
kidney cortical cell | 1.16e-07 | 12 |
renal cortical epithelial cell | 1.16e-07 | 12 |
hepatocyte | 1.47e-07 | 12 |