FFCP PHASE1:Hg19::chr1:11866034..11866108,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7436 | |||
|TSSclassifier=strong | |||
|UniProt=P42898 | |||
|association_with_transcript=6bp_to_ENST00000376590,uc001atc.1_5end | |||
|description=CAGE_peak_2_at_MTHFR_5end | |||
|id=chr1:11866034..11866108,- | |||
|ontology_enrichment_celltype=CL:0000037!7.79e-39!172;CL:0000566!7.79e-39!172;CL:0000988!1.02e-36!182;CL:0000738!5.61e-36!140;CL:0002032!9.09e-36!165;CL:0000837!9.09e-36!165;CL:0002087!1.11e-34!119;CL:0002031!2.27e-32!124;CL:0000763!1.12e-24!112;CL:0000049!1.12e-24!112;CL:0002194!6.78e-24!63;CL:0000576!6.78e-24!63;CL:0000040!6.78e-24!63;CL:0000559!6.78e-24!63;CL:0002057!2.83e-23!42;CL:0002009!3.18e-23!65;CL:0000766!4.73e-23!76;CL:0000839!1.01e-22!70;CL:0000557!6.99e-22!71;CL:0000860!1.11e-19!45;CL:0000838!2.44e-10!52;CL:0000542!4.59e-10!53;CL:0000051!4.59e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.73e-21;39!CL:0000234;1.73e-21;39!CL:0000860;4.81e-21;33!CL:0002057;4.81e-21;33!CL:0000576;5.64e-18;48!CL:0000766;5.32e-13;69!CL:0002087;3.39e-11;104!CL:0000738;2.65e-09;136!CL:0000763;1.71e-08;100!CL:0000791;6.63e-08;18!CL:0000789;6.63e-08;18!CL:0002419;6.63e-08;18!CL:0000988;6.29e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.21e-41,168;CL:0000738,2.97e-41,136;CL:0002087,6.46e-41,115;CL:0000988,1.13e-38,177;CL:0002032,4.77e-38,161;CL:0000837,4.77e-38,161;CL:0002031,8.37e-37,120;CL:0000473,2.31e-32,48;CL:0000234,2.31e-32,48;CL:0002194,5.36e-31,59;CL:0000576,5.36e-31,59;CL:0000040,5.36e-31,59;CL:0000559,5.36e-31,59;CL:0000766,3.69e-29,72;CL:0002009,4.50e-29,61;CL:0000839,1.85e-28,66;CL:0000860,5.18e-28,42;CL:0002057,5.18e-28,42;CL:0000763,5.37e-27,108;CL:0000049,5.37e-27,108;CL:0000557,1.80e-26,67;CL:0000838,1.56e-10,52;CL:0000542,4.63e-10,53;CL:0000051,4.63e-10,53;CL:0000791,9.39e-08,18;CL:0000789,9.39e-08,18;CL:0002420,9.39e-08,18;CL:0002419,9.39e-08,18;CL:0000790,9.39e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-20;42!CL:0000049;1.00e-08;108!CL:0000790;6.63e-08;18!UBERON:0006601;7.26e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.95e-33!115;UBERON:0002390!1.06e-23!102;UBERON:0003061!1.06e-23!102;UBERON:0001049!1.46e-23!57;UBERON:0005068!1.46e-23!57;UBERON:0006241!1.46e-23!57;UBERON:0007135!1.46e-23!57;UBERON:0002193!4.07e-22!112;UBERON:0003080!2.68e-19!42;UBERON:0001017!4.80e-19!82;UBERON:0002780!4.87e-19!41;UBERON:0001890!4.87e-19!41;UBERON:0006240!4.87e-19!41;UBERON:0002616!5.38e-19!59;UBERON:0000073!7.21e-18!94;UBERON:0001016!7.21e-18!94;UBERON:0005743!9.48e-18!86;UBERON:0002371!9.74e-18!80;UBERON:0000955!4.33e-17!69;UBERON:0006238!4.33e-17!69;UBERON:0001474!1.44e-16!86;UBERON:0001893!4.58e-16!34;UBERON:0002020!6.40e-16!34;UBERON:0003528!6.40e-16!34;UBERON:0002791!1.64e-15!33;UBERON:0001869!5.33e-15!32;UBERON:0002405!1.61e-14!115;UBERON:0002619!5.97e-13!22;UBERON:0002346!2.06e-12!90;UBERON:0001950!5.94e-12!20;UBERON:0003075!6.67e-12!86;UBERON:0007284!6.67e-12!86;UBERON:0000956!8.55e-12!25;UBERON:0000203!8.55e-12!25;UBERON:0004765!4.26e-11!101;UBERON:0001434!4.26e-11!101;UBERON:0003056!1.07e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.04e-16;41!UBERON:0001890;1.04e-16;41!UBERON:0001893;2.45e-16;34!UBERON:0003528;3.34e-16;34!UBERON:0002020;3.34e-16;34!UBERON:0001869;5.60e-16;32!UBERON:0002791;6.55e-16;32!UBERON:0002619;2.38e-15;22!UBERON:0000073;2.47e-15;53!UBERON:0002616;2.47e-15;53!UBERON:0001950;3.74e-14;20!UBERON:0000956;6.82e-14;25!UBERON:0000203;6.82e-14;25!UBERON:0007023;5.98e-11;114!UBERON:0000955;3.32e-09;68!UBERON:0001017;1.42e-08;75!UBERON:0001016;2.40e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-38,114;UBERON:0002390,3.31e-28,98;UBERON:0003061,3.31e-28,98;UBERON:0001049,1.46e-27,56;UBERON:0005068,1.46e-27,56;UBERON:0006241,1.46e-27,56;UBERON:0007135,1.46e-27,56;UBERON:0000073,5.44e-26,53;UBERON:0002616,5.44e-26,53;UBERON:0002193,2.68e-25,108;UBERON:0002780,1.05e-22,41;UBERON:0001890,1.05e-22,41;UBERON:0003080,1.05e-22,41;UBERON:0006240,1.05e-22,41;UBERON:0002371,7.78e-22,76;UBERON:0001017,5.75e-21,81;UBERON:0002405,9.10e-21,93;UBERON:0001016,1.91e-20,89;UBERON:0001474,2.09e-19,82;UBERON:0001893,4.43e-19,34;UBERON:0003528,6.66e-19,34;UBERON:0002020,6.66e-19,34;UBERON:0000955,3.47e-18,68;UBERON:0006238,3.47e-18,68;UBERON:0001869,8.79e-18,32;UBERON:0002791,1.12e-17,32;UBERON:0002346,1.71e-15,86;UBERON:0002619,1.99e-15,22;UBERON:0004765,2.05e-15,90;UBERON:0003075,7.11e-15,82;UBERON:0007284,7.11e-15,82;UBERON:0001950,3.27e-14,20;UBERON:0000956,7.02e-14,25;UBERON:0000203,7.02e-14,25;UBERON:0001434,1.03e-12,100;UBERON:0003056,3.40e-11,61;UBERON:0010371,1.55e-09,104 | |||
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| |||
|short_description=p2@MTHFR | |||
}} |
Revision as of 16:21, 10 January 2014
Short description: | p2@MTHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTHFR_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000376590, uc001atc.1_5end |
EntrezGene: | MTHFR |
HGNC: | 7436 |
UniProt: | P42898 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data