FFCP PHASE1:Hg19::chr11:102663449..102663467,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102663449..102663467,- | |||
|id=chr11:102663449..102663467,- | |||
|ontology_enrichment_celltype=CL:0000359!2.67e-26!32;CL:0000192!7.72e-25!42;CL:0000514!7.72e-25!42;CL:0000187!6.66e-20!54;CL:0000055!3.42e-19!180;CL:0000183!7.19e-19!59;CL:0000680!2.36e-18!57;CL:0000056!2.36e-18!57;CL:0000355!2.36e-18!57;CL:0000393!5.77e-17!60;CL:0000211!5.77e-17!60;CL:0000222!2.45e-16!119;CL:0002539!1.39e-10!10;CL:0000057!5.80e-10!75;CL:0000220!1.03e-09!246;CL:0002321!1.66e-09!248;CL:0000048!4.17e-09!430;CL:0000723!4.43e-09!436;CL:0002139!7.64e-09!24;CL:0002494!8.88e-09!16;CL:1000413!1.45e-08!9;CL:0000034!1.64e-08!444;CL:0002371!3.36e-08!591;CL:1000306!1.65e-07!4;CL:0002547!1.65e-07!4;CL:0000071!2.09e-07!18;CL:0002546!2.09e-07!18;CL:0002594!2.44e-07!4;CL:0000144!4.89e-07!625;CL:0000548!9.92e-07!679;CL:0000004!9.92e-07!679;CL:0000255!9.92e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.69e-36;32!CL:0000192;8.16e-20;43!CL:0002539;2.23e-14;10!CL:0002595;5.22e-14;5!CL:0002592;2.80e-13;3!CL:1000306;1.21e-09;4!CL:0002547;1.21e-09;4!CL:0002593;2.23e-09;2!CL:0000187;3.84e-09;55!CL:0002494;1.17e-08;16!CL:0000393;3.37e-08;61!CL:0000211;3.37e-08;61!CL:1000413;4.26e-07;9!CL:0002139;4.49e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.47e-38,32;CL:0000192,4.78e-27,43;CL:0000514,4.78e-27,43;CL:0000187,3.68e-20,55;CL:0000680,6.91e-19,58;CL:0000056,6.91e-19,58;CL:0000355,6.91e-19,58;CL:0000393,9.71e-18,61;CL:0000211,9.71e-18,61;CL:0000222,7.23e-15,121;CL:0002539,2.14e-14,10;CL:0002595,4.99e-14,5;CL:0002592,1.83e-13,3;CL:1000306,8.25e-10,4;CL:0002547,8.25e-10,4;CL:0002593,2.06e-09,2;CL:0002494,8.15e-09,16;CL:0002321,2.19e-07,250;CL:1000413,4.60e-07,9;CL:0002139,6.01e-07,24;CL:0000048,9.54e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;8.16e-20;43!CL:0000355;9.22e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.00e-45!42;UBERON:0003509!3.00e-45!42;UBERON:0004572!3.00e-45!42;UBERON:0001981!1.83e-35!60;UBERON:0007500!1.83e-35!60;UBERON:0004537!1.83e-35!60;UBERON:0006965!1.83e-35!60;UBERON:0000055!1.42e-34!69;UBERON:0004573!4.36e-33!33;UBERON:0004571!4.36e-33!33;UBERON:0004872!5.66e-32!84;UBERON:0002049!2.27e-28!79;UBERON:0007798!2.27e-28!79;UBERON:0004535!1.36e-24!110;UBERON:0003914!1.14e-23!118;UBERON:0001009!1.60e-23!113;UBERON:0004290!3.69e-19!70;UBERON:0000914!6.16e-19!83;UBERON:0002329!6.16e-19!83;UBERON:0003077!6.16e-19!83;UBERON:0003059!6.16e-19!83;UBERON:0007282!6.16e-19!83;UBERON:0009618!6.16e-19!83;UBERON:0007285!6.16e-19!83;UBERON:0000947!4.02e-18!21;UBERON:0010191!4.02e-18!21;UBERON:0001134!1.56e-16!61;UBERON:0002036!1.56e-16!61;UBERON:0003082!1.56e-16!61;UBERON:0000490!5.52e-16!138;UBERON:0000486!6.58e-16!82;UBERON:0002385!1.02e-15!63;UBERON:0001015!1.02e-15!63;UBERON:0000383!1.02e-15!63;UBERON:0005256!5.83e-12!143;UBERON:0004111!4.02e-11!241;UBERON:0004237!1.39e-10!10;UBERON:0004695!1.39e-10!10;UBERON:0002111!1.39e-10!10;UBERON:0004178!1.39e-10!10;UBERON:0000477!9.43e-10!286;UBERON:0000025!4.46e-09!194;UBERON:0003498!7.53e-09!5;UBERON:0005985!7.53e-09!5;UBERON:0003915!1.45e-08!9;UBERON:0004700!1.45e-08!9;UBERON:0001917!1.45e-08!9;UBERON:0000926!3.05e-08!448;UBERON:0004120!3.05e-08!448;UBERON:0006603!3.05e-08!448;UBERON:0000483!4.95e-08!309;UBERON:0003081!5.59e-08!216;UBERON:0001135!6.36e-08!15;UBERON:0000119!8.55e-08!312;UBERON:0000415!1.65e-07!4;UBERON:0007240!1.65e-07!4;UBERON:0005742!1.65e-07!4;UBERON:0005734!1.65e-07!4;UBERON:0004664!1.65e-07!4;UBERON:0004663!1.65e-07!4;UBERON:0001986!2.09e-07!18;UBERON:0004638!2.09e-07!18;UBERON:0004852!2.09e-07!18;UBERON:0001310!2.44e-07!4;UBERON:0000948!2.48e-07!24;UBERON:0005498!2.48e-07!24;UBERON:0004140!2.48e-07!24;UBERON:0009881!2.48e-07!24;UBERON:0004141!2.48e-07!24;UBERON:0003084!2.48e-07!24;UBERON:0007005!2.48e-07!24;UBERON:0004139!2.48e-07!24;UBERON:0004291!2.48e-07!24;UBERON:0003102!3.13e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.85e-45;33!UBERON:0004571;3.85e-45;33!UBERON:0001637;5.31e-43;42!UBERON:0003509;5.31e-43;42!UBERON:0004572;5.31e-43;42!UBERON:0000947;3.38e-25;21!UBERON:0010191;3.38e-25;21!UBERON:0007500;4.60e-21;56!UBERON:0001981;4.60e-21;56!UBERON:0004537;4.60e-21;56!UBERON:0000055;2.25e-19;65!UBERON:0003914;4.38e-15;74!UBERON:0004237;2.23e-14;10!UBERON:0004695;2.23e-14;10!UBERON:0002111;2.23e-14;10!UBERON:0004178;2.23e-14;10!UBERON:0003834;5.22e-14;5!UBERON:0001533;5.22e-14;5!UBERON:0002049;5.72e-14;75!UBERON:0007798;5.72e-14;75!UBERON:0003498;2.80e-13;3!UBERON:0005985;2.80e-13;3!UBERON:0001621;2.80e-13;3!UBERON:0003513;5.17e-10;7!UBERON:0004797;1.21e-09;4!UBERON:0000415;1.21e-09;4!UBERON:0007240;1.21e-09;4!UBERON:0005742;1.21e-09;4!UBERON:0005734;1.21e-09;4!UBERON:0004664;1.21e-09;4!UBERON:0004663;1.21e-09;4!UBERON:0002456;2.23e-09;2!UBERON:0001135;2.33e-09;15!UBERON:0004535;1.33e-08;109!UBERON:0002118;1.24e-07;5!UBERON:0003915;4.26e-07;9!UBERON:0004700;4.26e-07;9!UBERON:0001917;4.26e-07;9!UBERON:0000025;7.15e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.21e-55,42;UBERON:0003509,4.21e-55,42;UBERON:0004572,4.21e-55,42;UBERON:0004573,2.49e-50,33;UBERON:0004571,2.49e-50,33;UBERON:0007500,9.73e-41,59;UBERON:0001981,9.73e-41,59;UBERON:0004537,9.73e-41,59;UBERON:0006965,9.73e-41,59;UBERON:0000055,3.58e-40,68;UBERON:0004872,1.38e-34,83;UBERON:0002049,3.99e-34,78;UBERON:0007798,3.99e-34,78;UBERON:0004535,1.76e-28,109;UBERON:0001009,1.63e-27,112;UBERON:0000947,2.67e-25,21;UBERON:0010191,2.67e-25,21;UBERON:0003914,1.90e-22,117;UBERON:0001134,2.21e-17,62;UBERON:0002036,2.21e-17,62;UBERON:0003082,2.21e-17,62;UBERON:0002385,1.06e-16,64;UBERON:0001015,1.06e-16,64;UBERON:0000383,1.06e-16,64;UBERON:0002329,1.28e-14,71;UBERON:0003059,1.28e-14,71;UBERON:0007282,1.28e-14,71;UBERON:0004290,1.28e-14,71;UBERON:0009618,1.28e-14,71;UBERON:0004237,2.14e-14,10;UBERON:0004695,2.14e-14,10;UBERON:0002111,2.14e-14,10;UBERON:0004178,2.14e-14,10;UBERON:0003077,2.34e-14,72;UBERON:0007285,2.34e-14,72;UBERON:0007524,4.22e-14,73;UBERON:0003834,4.99e-14,5;UBERON:0001533,4.99e-14,5;UBERON:0001621,1.83e-13,3;UBERON:0003498,2.01e-13,5;UBERON:0005985,2.01e-13,5;UBERON:0007503,6.41e-13,78;UBERON:0000486,6.98e-12,83;UBERON:0000490,3.22e-11,148;UBERON:0003081,6.58e-11,203;UBERON:0000025,7.22e-11,192;UBERON:0003513,5.01e-10,7;UBERON:0000926,6.37e-10,315;UBERON:0004120,6.37e-10,315;UBERON:0006603,6.37e-10,315;UBERON:0000415,8.25e-10,4;UBERON:0007240,8.25e-10,4;UBERON:0005742,8.25e-10,4;UBERON:0005734,8.25e-10,4;UBERON:0004664,8.25e-10,4;UBERON:0004663,8.25e-10,4;UBERON:0004111,1.16e-09,240;UBERON:0002456,2.06e-09,2;UBERON:0001135,2.27e-09,15;UBERON:0002118,1.60e-07,5;UBERON:0000948,1.96e-07,24;UBERON:0005498,1.96e-07,24;UBERON:0004140,1.96e-07,24;UBERON:0009881,1.96e-07,24;UBERON:0004141,1.96e-07,24;UBERON:0003084,1.96e-07,24;UBERON:0007005,1.96e-07,24;UBERON:0004139,1.96e-07,24;UBERON:0004291,1.96e-07,24;UBERON:0003915,4.60e-07,9;UBERON:0004700,4.60e-07,9;UBERON:0001917,4.60e-07,9;UBERON:0005256,8.86e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,4.21886169616784,4.38186054232424,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0,1.38856200643038,1.13061588384802,0.838998872419812,1.37559020970034,0.417989933073621,0,1.06729878806013,1.00416183829401,0,0,0.24406205754817,0,3.24056779152704,0,0,0,3.06633274931766,0,0.732806975721629,0,0,0,0.496971951695318,3.79891534993739,0.397227542439656,1.72101972449288,2.4826786753885,0,0,1.97334038733728,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0.149448680551801,0.469737994575059,0.809364721840658,0.280901613404497,1.02077085627447,0.61417158655884,0.413303124703062,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0,0.169560592310488,0.57978255948989,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.721832238805369,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04260337361699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31314540703983,0.532685175939381,0.574890092096664,1.55776328755086,1.27831416305955,0,0,0.276242966807689,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.850468526382578,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,1.5740617341532,0,0.616067160352178,2.12922412126809,0,3.33583594387056,0.143124886741991,0,0,0,0,0,0.318203247925937,4.70969184119538,0,0,0.235624804691373,1.81964233415984,9.5106192703805,6.7401352998237,0,2.68084838594413,4.22600587027022,0.136499911407986,0.424216295861138,1.13008116620243,0,7.29782872765342,8.33056681982149,0,0,0.608731130888112,3.0982349809975,0.563391205064483,0,0,2.49669736036875,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,4.37172145746577,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,3.05845565607623,0,0,0.895528817321244,0,0,0.189403005275089,0.251567901752575,0,0.915360273587694,0,1.39893480524502,8.7234538493884,1.43367090447332,0,0.465788870628778,0.414706207840855,0,0.521745061811734,0,0,1.22061219961398,3.09142720644351,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0,0,0,5.2407013603231,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,0,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr11:102663449..102663467,- | |||
}} |
Revision as of 10:03, 11 January 2014
Short description: | p@chr11:102663449..102663467, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102663449..102663467, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.47e-38 | 32 |
smooth muscle cell | 4.78e-27 | 43 |
smooth muscle myoblast | 4.78e-27 | 43 |
muscle cell | 3.68e-20 | 55 |
muscle precursor cell | 6.91e-19 | 58 |
myoblast | 6.91e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.91e-19 | 58 |
electrically responsive cell | 9.71e-18 | 61 |
electrically active cell | 9.71e-18 | 61 |
mesodermal cell | 7.23e-15 | 121 |
aortic smooth muscle cell | 2.14e-14 | 10 |
smooth muscle cell of the subclavian artery | 4.99e-14 | 5 |
smooth muscle cell of the coronary artery | 1.83e-13 | 3 |
fibroblast of tunica adventitia of artery | 8.25e-10 | 4 |
fibroblast of the aortic adventitia | 8.25e-10 | 4 |
smooth muscle cell of the internal thoracic artery | 2.06e-09 | 2 |
cardiocyte | 8.15e-09 | 16 |
embryonic cell | 2.19e-07 | 250 |
endothelial cell of artery | 4.60e-07 | 9 |
endothelial cell of vascular tree | 6.01e-07 | 24 |
multi fate stem cell | 9.54e-07 | 427 |