FFCP PHASE1:Hg19::chr12:7941106..7941119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr12:7941106..7941119,+ | |||
|id=chr12:7941106..7941119,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.04e-58!5;CL:0000039!9.80e-28!7;CL:0000586!9.80e-28!7;CL:0000540!5.30e-18!6;CL:0000031!5.30e-18!6;CL:0000404!5.30e-18!6;CL:0000047!1.16e-13!8;CL:0000148!3.50e-11!10;CL:0000541!3.50e-11!10;CL:0000147!3.87e-08!14;CL:0002262!2.43e-07!2;CL:1000398!2.43e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.43e-90;7!CL:0000586;4.43e-90;7!CL:0002262;5.69e-21;2!CL:1000398;5.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.58e-90,7;CL:0000586,5.58e-90,7;CL:0002262,4.66e-21,2;CL:1000398,4.66e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.16e-63;10!UBERON:0005564;2.16e-63;10 | |||
|ontology_enrichment_disease=DOID:3095!4.61e-19!22;DOID:2994!4.61e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.36e-29;22!DOID:2994;2.36e-29;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.54e-29,22;DOID:2994,2.54e-29,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.57e-24!8;UBERON:0003135!8.93e-18!11;UBERON:0000991!3.79e-14!21;UBERON:0009196!3.79e-14!21;UBERON:0009117!3.79e-14!21;UBERON:0005564!3.79e-14!21;UBERON:0004176!1.67e-13!22;UBERON:0003101!5.27e-09!22;UBERON:0000079!5.27e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.79e-79;8!UBERON:0003135;9.97e-58;11!UBERON:0000991;1.04e-30;21!UBERON:0003101;2.36e-29;22!UBERON:0000079;2.36e-29;22!UBERON:0001281;5.69e-21;2!UBERON:0003497;5.69e-21;2!UBERON:0003909;5.69e-21;2!UBERON:0003835;5.69e-21;2!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0002323;9.38e-14;45!UBERON:0003133;2.59e-11;44!UBERON:0000922;6.25e-11;49!UBERON:0002553;5.39e-09;52!UBERON:0004458;7.97e-08;48!UBERON:0005156;1.99e-07;59!UBERON:0000990;1.99e-07;59!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.08e-79,8;UBERON:0003135,1.15e-57,11;UBERON:0000991,1.13e-30,21;UBERON:0009196,1.13e-30,21;UBERON:0009117,1.13e-30,21;UBERON:0005564,1.13e-30,21;UBERON:0004176,2.54e-29,22;UBERON:0003101,2.54e-29,22;UBERON:0000079,2.54e-29,22;UBERON:0001281,4.66e-21,2;UBERON:0003497,4.66e-21,2;UBERON:0003909,4.66e-21,2;UBERON:0003835,4.66e-21,2;UBERON:0001280,1.60e-14,3;UBERON:0004647,1.60e-14,3;UBERON:0005171,1.60e-14,3;UBERON:0002323,1.89e-14,46;UBERON:0003133,7.05e-14,48;UBERON:0004458,1.31e-13,49;UBERON:0003886,2.04e-12,54;UBERON:0005156,2.01e-11,59;UBERON:0000990,2.01e-11,59;UBERON:0002553,4.53e-11,61;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0003513,5.70e-07,7;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0.580969714347592,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0,1.22386595690378,6.68043513163901,8.82191035534511,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:7941106..7941119,+ | |||
}} |
Revision as of 11:54, 11 January 2014
Short description: | p@chr12:7941106..7941119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7941106..7941119, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.58e-90 | 7 |
germ cell | 5.58e-90 | 7 |
endothelial cell of sinusoid | 4.66e-21 | 2 |
endothelial cell of hepatic sinusoid | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 7.08e-79 | 8 |
male reproductive organ | 1.15e-57 | 11 |
gonad | 1.13e-30 | 21 |
indifferent external genitalia | 1.13e-30 | 21 |
indifferent gonad | 1.13e-30 | 21 |
gonad primordium | 1.13e-30 | 21 |
external genitalia | 2.54e-29 | 22 |
male organism | 2.54e-29 | 22 |
male reproductive system | 2.54e-29 | 22 |
hepatic sinusoid | 4.66e-21 | 2 |
abdomen blood vessel | 4.66e-21 | 2 |
sinusoid | 4.66e-21 | 2 |
abdominal segment blood vessel | 4.66e-21 | 2 |
liver parenchyma | 1.60e-14 | 3 |
liver lobule | 1.60e-14 | 3 |
hepatic duct | 1.60e-14 | 3 |
body cavity | 1.89e-14 | 46 |
reproductive organ | 7.05e-14 | 48 |
body cavity or lining | 1.31e-13 | 49 |
body cavity precursor | 2.04e-12 | 54 |
reproductive structure | 2.01e-11 | 59 |
reproductive system | 2.01e-11 | 59 |
anatomical cavity | 4.53e-11 | 61 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
trunk blood vessel | 5.70e-07 | 7 |
primordium | 8.66e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.54e-29 | 22 |
germ cell cancer | 2.54e-29 | 22 |