FFCP PHASE1:Hg19::chr13:100623360..100623373,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85416 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20322 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-388bp_to_ENST00000397451_5end | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_2_at_ZIC5_5end | |||
|id=chr13:100623360..100623373,- | |||
|ontology_enrichment_celltype=CL:0002322!5.38e-11!5;CL:0000047!7.64e-09!8;CL:0000540!1.94e-08!6;CL:0000031!1.94e-08!6;CL:0000404!1.94e-08!6;CL:0002319!6.78e-08!25;CL:0000133!1.19e-07!59;CL:0002603!4.69e-07!3;CL:0000128!6.05e-07!7;CL:0000126!6.05e-07!7;CL:0000127!6.05e-07!7;CL:0002453!6.05e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.44e-26;5!CL:0002321;2.42e-16;15!CL:0002603;6.60e-16;3!CL:0000540;9.85e-09;6!CL:0000404;9.85e-09;6!CL:0002319;1.16e-08;25!CL:0000128;4.44e-07;7!CL:0000126;4.44e-07;7!CL:0000127;4.44e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.47e-26,5;CL:0002603,6.63e-16,3;CL:0000047,4.98e-11,8;CL:0000133,6.52e-10,59;CL:0000540,1.00e-08,6;CL:0000031,1.00e-08,6;CL:0000404,1.00e-08,6;CL:0002319,1.18e-08,25;CL:0000221,9.45e-08,72;CL:0000128,4.44e-07,7;CL:0000126,4.44e-07,7;CL:0000127,4.44e-07,7;CL:0002453,4.44e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;9.85e-09;6!UBERON:0006215;1.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.44e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.83e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-44!82;UBERON:0005743!1.79e-43!86;UBERON:0000073!5.25e-42!94;UBERON:0001016!5.25e-42!94;UBERON:0002346!1.36e-38!90;UBERON:0002616!1.49e-36!59;UBERON:0001049!4.16e-36!57;UBERON:0005068!4.16e-36!57;UBERON:0006241!4.16e-36!57;UBERON:0007135!4.16e-36!57;UBERON:0003075!3.12e-35!86;UBERON:0007284!3.12e-35!86;UBERON:0000955!1.43e-34!69;UBERON:0006238!1.43e-34!69;UBERON:0001893!4.97e-29!34;UBERON:0001869!1.50e-28!32;UBERON:0002791!1.71e-27!33;UBERON:0000924!5.71e-27!173;UBERON:0006601!5.71e-27!173;UBERON:0000956!9.91e-27!25;UBERON:0000203!9.91e-27!25;UBERON:0003056!3.28e-26!61;UBERON:0002020!3.31e-26!34;UBERON:0003528!3.31e-26!34;UBERON:0000033!4.71e-26!123;UBERON:0002619!3.57e-25!22;UBERON:0002780!4.89e-25!41;UBERON:0001890!4.89e-25!41;UBERON:0006240!4.89e-25!41;UBERON:0004121!2.06e-24!169;UBERON:0003080!2.94e-24!42;UBERON:0000153!3.75e-24!129;UBERON:0007811!3.75e-24!129;UBERON:0001950!5.86e-22!20;UBERON:0004733!8.61e-14!12;UBERON:0002028!8.61e-14!12;UBERON:0007277!8.61e-14!12;UBERON:0003076!4.81e-13!15;UBERON:0003057!4.81e-13!15;UBERON:0004732!1.52e-12!13;UBERON:0000200!1.71e-11!6;UBERON:0007023!1.87e-10!115;UBERON:0002680!9.35e-10!9;UBERON:0001895!9.35e-10!9;UBERON:0010092!9.35e-10!9;UBERON:0002037!1.09e-08!6;UBERON:0006215!1.09e-08!6;UBERON:0001871!3.11e-08!7;UBERON:0000488!2.46e-07!4;UBERON:0000064!7.04e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.47e-21;6!UBERON:0004733;1.84e-14;12!UBERON:0002028;1.84e-14;12!UBERON:0002680;9.04e-14;9!UBERON:0001895;9.04e-14;9!UBERON:0004732;2.63e-13;13!UBERON:0000073;7.28e-11;53!UBERON:0002616;7.28e-11;53!UBERON:0002771;8.69e-11;2!UBERON:0001017;5.73e-09;75!UBERON:0000200;6.64e-08;6!UBERON:0002619;3.37e-07;22!UBERON:0001893;8.55e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.84e-24,89;UBERON:0001017,8.13e-22,81;UBERON:0002037,7.74e-21,6;UBERON:0006215,7.74e-21,6;UBERON:0001049,1.79e-18,56;UBERON:0005068,1.79e-18,56;UBERON:0006241,1.79e-18,56;UBERON:0007135,1.79e-18,56;UBERON:0000073,4.08e-17,53;UBERON:0002616,4.08e-17,53;UBERON:0003076,1.93e-15,15;UBERON:0003057,1.93e-15,15;UBERON:0004733,1.99e-14,12;UBERON:0002028,1.99e-14,12;UBERON:0007277,1.99e-14,12;UBERON:0000955,2.05e-14,68;UBERON:0006238,2.05e-14,68;UBERON:0002346,3.55e-14,86;UBERON:0002680,7.92e-14,9;UBERON:0001895,7.92e-14,9;UBERON:0010092,7.92e-14,9;UBERON:0004732,2.82e-13,13;UBERON:0004121,1.90e-12,171;UBERON:0000924,1.90e-12,171;UBERON:0006601,1.90e-12,171;UBERON:0003075,1.30e-11,82;UBERON:0007284,1.30e-11,82;UBERON:0002771,7.88e-11,2;UBERON:0010371,1.74e-08,104;UBERON:0002780,7.08e-08,41;UBERON:0001890,7.08e-08,41;UBERON:0003080,7.08e-08,41;UBERON:0006240,7.08e-08,41;UBERON:0000200,7.51e-08,6;UBERON:0001893,1.09e-07,34;UBERON:0011216,1.84e-07,223;UBERON:0002619,4.19e-07,22;UBERON:0010314,5.55e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95490539384291,1.22400414746552,2.5076377718247,0.572471974262113,0.684372125364421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.221729397462564,0.790513071238134,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96764655938411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29329006549908,5.96383957446684,3.71820617182459,1.24393266018445,5.55105871926382,6.56959246336494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,1.30788020649984,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06551398755941,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0.500547425135725,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0,0,0,0,1.87984741883082,1.18219047581419,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,1.21322039365219,0,0,0,0,0,0,0,0.61214552326098,0.505492637027904,0,0.207376382794494,0,0,0,0,1.70765727617876,0,1.56203764501618,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,1.412098027064,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,2.45166131000836,5.30485389934563,6.60189295666722,5.81616473240859,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,1.22026264901963,0.876336514945499,1.14681839138014,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77438260454151,4.47759516587257,1.01839517972415,1.2754495206101,0.867550349813015,0,0,0.47317047000752,0,0,0,0.385375350578757,0,1.11743701340006,0.41023272848151,0.504143392443436,0.899044282034833,1.61475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0,1.2401207790071,0.697573912132975,1.09394961803644,0,0,0,0,0,1.3451348888753,0,0,0,0,0,0.135939465953663,0.920818829879887,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.47404083519818,4.41717416398876,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,3.31320280605688,0.815897882290976,0.436350690340377,0,0,0,0,2.27099564703142,0,0.126698501011437,0,0.801652215796681,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ZIC5 | |||
}} |
Revision as of 18:28, 11 January 2014
Short description: | p2@ZIC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZIC5_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | -388bp_to_ENST00000397451_5end |
EntrezGene: | ZIC5 |
HGNC: | 20322 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.47e-26 | 5 |
astrocyte of the cerebellum | 6.63e-16 | 3 |
neuronal stem cell | 4.98e-11 | 8 |
neurectodermal cell | 6.52e-10 | 59 |
neuron | 1.00e-08 | 6 |
neuroblast | 1.00e-08 | 6 |
electrically signaling cell | 1.00e-08 | 6 |
neural cell | 1.18e-08 | 25 |
ectodermal cell | 9.45e-08 | 72 |
oligodendrocyte | 4.44e-07 | 7 |
macroglial cell | 4.44e-07 | 7 |
astrocyte | 4.44e-07 | 7 |
oligodendrocyte precursor cell | 4.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.83e-08 | 10 |