FFCP PHASE1:Hg19::chr14:102551297..102551343,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3320 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5253 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-162bp_to_ENST00000560130_5end | |||
|coexpression_cluster_id=C977 | |||
|description=CAGE_peak_2_at_HSP90AA1_5end | |||
|id=chr14:102551297..102551343,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.61e-19!239;DOID:162!3.99e-19!235;DOID:0050687!8.78e-11!143;DOID:2531!1.68e-08!51;DOID:0060083!1.68e-08!51;DOID:0050686!4.38e-08!137;DOID:1240!5.04e-08!39;DOID:305!9.70e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.27e-19,235;DOID:14566,8.03e-19,239;DOID:0050687,1.13e-10,143;DOID:2531,1.81e-08,51;DOID:0060083,1.81e-08,51;DOID:1240,4.50e-08,39;DOID:0050686,6.72e-08,137;DOID:305,1.28e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.99e-17!57;UBERON:0005068!3.99e-17!57;UBERON:0006241!3.99e-17!57;UBERON:0007135!3.99e-17!57;UBERON:0001017!1.70e-15!82;UBERON:0003080!1.45e-14!42;UBERON:0002780!5.52e-14!41;UBERON:0001890!5.52e-14!41;UBERON:0006240!5.52e-14!41;UBERON:0005743!9.25e-14!86;UBERON:0000073!1.63e-13!94;UBERON:0001016!1.63e-13!94;UBERON:0000955!2.31e-13!69;UBERON:0006238!2.31e-13!69;UBERON:0002616!1.85e-12!59;UBERON:0007023!4.06e-12!115;UBERON:0002020!5.23e-12!34;UBERON:0003528!5.23e-12!34;UBERON:0002791!1.43e-10!33;UBERON:0001893!2.61e-10!34;UBERON:0001869!5.69e-10!32;UBERON:0002346!1.10e-09!90;UBERON:0003075!2.71e-09!86;UBERON:0007284!2.71e-09!86;UBERON:0002619!5.07e-08!22;UBERON:0000956!1.17e-07!25;UBERON:0000203!1.17e-07!25;UBERON:0003056!5.33e-07!61;UBERON:0001950!7.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.36e-11;41!UBERON:0001890;9.36e-11;41!UBERON:0003528;3.32e-10;34!UBERON:0002020;3.32e-10;34!UBERON:0002791;4.08e-10;32!UBERON:0001869;1.83e-09;32!UBERON:0000073;3.62e-09;53!UBERON:0002616;3.62e-09;53!UBERON:0001893;9.60e-09;34!UBERON:0002619;4.86e-08;22!UBERON:0000956;1.16e-07;25!UBERON:0000203;1.16e-07;25!UBERON:0000955;3.82e-07;68!UBERON:0001950;7.69e-07;20!UBERON:0001017;7.97e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-16,56;UBERON:0005068,1.03e-16,56;UBERON:0006241,1.03e-16,56;UBERON:0007135,1.03e-16,56;UBERON:0000073,3.48e-15,53;UBERON:0002616,3.48e-15,53;UBERON:0001017,3.76e-15,81;UBERON:0001016,8.76e-15,89;UBERON:0002780,4.37e-14,41;UBERON:0001890,4.37e-14,41;UBERON:0003080,4.37e-14,41;UBERON:0006240,4.37e-14,41;UBERON:0000955,5.21e-13,68;UBERON:0006238,5.21e-13,68;UBERON:0003528,4.28e-12,34;UBERON:0002020,4.28e-12,34;UBERON:0007023,7.24e-12,114;UBERON:0002791,7.09e-11,32;UBERON:0001893,2.21e-10,34;UBERON:0001869,4.83e-10,32;UBERON:0002346,5.47e-10,86;UBERON:0003075,1.35e-09,82;UBERON:0007284,1.35e-09,82;UBERON:0002619,4.45e-08,22;UBERON:0000956,1.04e-07,25;UBERON:0000203,1.04e-07,25;UBERON:0011216,1.90e-07,223;UBERON:0010371,2.56e-07,104;UBERON:0001950,6.99e-07,20;UBERON:0003056,7.79e-07,61 | |||
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| |||
|short_description=p2@HSP90AA1 | |||
}} |
Revision as of 22:03, 11 January 2014
Short description: | p2@HSP90AA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HSP90AA1_5end |
Coexpression cluster: | C977_hippocampus_medulla_locus_heart_thalamus_parietal_occipital |
Association with transcript: | -162bp_to_ENST00000560130_5end |
EntrezGene: | HSP90AA1 |
HGNC: | 5253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.03e-16 | 56 |
neural rod | 1.03e-16 | 56 |
future spinal cord | 1.03e-16 | 56 |
neural keel | 1.03e-16 | 56 |
regional part of nervous system | 3.48e-15 | 53 |
regional part of brain | 3.48e-15 | 53 |
central nervous system | 3.76e-15 | 81 |
nervous system | 8.76e-15 | 89 |
regional part of forebrain | 4.37e-14 | 41 |
forebrain | 4.37e-14 | 41 |
anterior neural tube | 4.37e-14 | 41 |
future forebrain | 4.37e-14 | 41 |
brain | 5.21e-13 | 68 |
future brain | 5.21e-13 | 68 |
brain grey matter | 4.28e-12 | 34 |
gray matter | 4.28e-12 | 34 |
adult organism | 7.24e-12 | 114 |
regional part of telencephalon | 7.09e-11 | 32 |
telencephalon | 2.21e-10 | 34 |
cerebral hemisphere | 4.83e-10 | 32 |
neurectoderm | 5.47e-10 | 86 |
neural plate | 1.35e-09 | 82 |
presumptive neural plate | 1.35e-09 | 82 |
regional part of cerebral cortex | 4.45e-08 | 22 |
cerebral cortex | 1.04e-07 | 25 |
pallium | 1.04e-07 | 25 |
organ system subdivision | 1.90e-07 | 223 |
ecto-epithelium | 2.56e-07 | 104 |
neocortex | 6.99e-07 | 20 |
pre-chordal neural plate | 7.79e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.27e-19 | 235 |
disease of cellular proliferation | 8.03e-19 | 239 |
cell type cancer | 1.13e-10 | 143 |
hematologic cancer | 1.81e-08 | 51 |
immune system cancer | 1.81e-08 | 51 |
leukemia | 4.50e-08 | 39 |
organ system cancer | 6.72e-08 | 137 |
carcinoma | 1.28e-07 | 106 |