FFCP PHASE1:Hg19::chr2:24346218..24346246,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31103 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000465360_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_PFN4_5end | |||
|id=chr2:24346218..24346246,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;5.06e-13;1!CL:0000557;5.06e-13;1!CL:0002363;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,4.98e-07,2;CL:0000008,4.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.06e-13;1!CL:0000008;3.81e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.48e-12!235;DOID:14566!4.65e-12!239;DOID:305!1.86e-07!106;DOID:0050686!2.02e-07!137;DOID:0050687!4.18e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.06e-13;1!UBERON:0001785;5.06e-13;1!UBERON:0002464;5.06e-13;1!UBERON:0004904;5.06e-13;1!UBERON:0001021;5.06e-13;1!UBERON:0003714;3.81e-07;2!UBERON:0005162;3.81e-07;2!UBERON:0000122;3.81e-07;2!UBERON:0003566;3.81e-07;2!UBERON:0001777;3.81e-07;2!UBERON:0000473;5.54e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2;UBERON:0003566,4.98e-07,2;UBERON:0001777,4.98e-07,2;UBERON:0000473,5.54e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0,0.273748850145768,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0,0.919421224478927,0,0,1.00707360754392,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,7.72776545436505,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.614942192715568,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0,0,0,1.58040879591855,0.858486162094873,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0.799266537048298,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0.783204629850962,0,0,0,0,0,0,1.20956117331872,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0.671624264166535,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0.379473173765715,0,0.288666338176536,0,0,0.376575203107117,0,1.68471475667626,0.886860307073351,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0.28853842595289,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0.222617410045812,0.16480387422676,0.211125408127993,0,0,0,0.20453736500431,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0.139423744278603,0,0,0.23056390438806,0.448788222048861,0,0.638002319463839,0.0915975934018623,0,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,0.421996129056054,0.326465616318295,0.424059214301822,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,0,1.35291077473043,0.311064574191741,0.664653872707185,0.661983911750998,0.313932918407225,0,0.853828638089378,0,0.173559738335131,0.195984794828755,0.522355239482415,0,0.51595809741485,0.19351266257817,0.65780385377567,0.574808199372465,0.0969890164884194,0.353024506766001,0,0,0.596143835108969,0,0.195551382734803,0,0,0,0.144090417154106,0.572682980829578,0.171594997861965,0,0,0.707082103850386,0.135904206073614,0,0.203996435272644,0,0,0.136905378891993,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0.164831716762333,0,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0.670869375198532,0.236417121897595,0.0524545881349981,0,0.35857467866569,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0.26446520348538,1.02652102730598,0.704815022316672,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0,0.138348634936231,0.249960815924213,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0.899606224327209,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0.226705925512272,0.231522474323834,0.734210113519403,0.358177682162975,0,0.219284049578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| |||
|short_description=p3@PFN4 | |||
}} |
Revision as of 02:04, 21 January 2014
Short description: | p3@PFN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PFN4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -29bp_to_ENST00000465360_5end |
EntrezGene: | PFN4 |
HGNC: | 31103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 4.98e-07 | 2 |
migratory cranial neural crest cell | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.76e-13 | 1 |
cranial nerve | 3.76e-13 | 1 |
nerve trunk | 3.76e-13 | 1 |
nerve connecting eye with brain | 3.76e-13 | 1 |
nerve | 3.76e-13 | 1 |
retinal neural layer | 3.76e-13 | 1 |
presumptive neural retina | 3.76e-13 | 1 |
neural tissue | 3.28e-07 | 2 |
multi cell component structure | 3.28e-07 | 2 |
neuron projection bundle | 3.28e-07 | 2 |
head connective tissue | 4.98e-07 | 2 |
substantia propria of cornea | 4.98e-07 | 2 |
testis | 5.54e-07 | 8 |