FFCP PHASE1:Hg19::chr2:196521845..196521869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULF5,C9J0F5,F2Z341 | |||
|association_with_transcript=0bp_to_ENST00000359634,ENST00000412905,ENST00000430412,NM_020342,uc002uth.3,uc010zgp.1_5end | |||
|coexpression_cluster_id=C4164 | |||
|description=CAGE_peak_3_at_SLC39A10_5end | |||
|id=chr2:196521845..196521869,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.39e-07!31;DOID:1240!8.54e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.32e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.78e-08,31;DOID:1240,2.20e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.29e-09!22;UBERON:0001869!1.77e-09!32;UBERON:0000956!2.73e-09!25;UBERON:0000203!2.73e-09!25;UBERON:0002020!2.84e-09!34;UBERON:0003528!2.84e-09!34;UBERON:0001893!7.20e-09!34;UBERON:0001950!7.92e-09!20;UBERON:0002791!2.53e-08!33;UBERON:0001017!6.80e-08!82;UBERON:0005743!1.58e-07!86;UBERON:0001737!1.90e-07!9;UBERON:0002780!2.36e-07!41;UBERON:0001890!2.36e-07!41;UBERON:0006240!2.36e-07!41;UBERON:0003080!4.82e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.28e-10;22!UBERON:0000956;2.86e-09;25!UBERON:0000203;2.86e-09;25!UBERON:0001950;4.33e-09;20!UBERON:0001869;7.87e-09;32!UBERON:0003528;1.83e-08;34!UBERON:0002020;1.83e-08;34!UBERON:0001893;2.60e-08;34!UBERON:0002791;3.59e-08;32!UBERON:0001737;5.68e-08;9!UBERON:0001557;5.68e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.03e-10,32;UBERON:0002619,3.73e-10,22;UBERON:0003528,5.12e-10,34;UBERON:0002020,5.12e-10,34;UBERON:0000956,8.28e-10,25;UBERON:0000203,8.28e-10,25;UBERON:0002791,2.22e-09,32;UBERON:0001950,2.60e-09,20;UBERON:0001893,2.84e-09,34;UBERON:0001017,3.52e-08,81;UBERON:0001737,7.29e-08,9;UBERON:0002780,2.36e-07,41;UBERON:0001890,2.36e-07,41;UBERON:0003080,2.36e-07,41;UBERON:0006240,2.36e-07,41;UBERON:0000955,5.09e-07,68;UBERON:0006238,5.09e-07,68;UBERON:0001049,9.61e-07,56;UBERON:0005068,9.61e-07,56;UBERON:0006241,9.61e-07,56;UBERON:0007135,9.61e-07,56 | |||
|phase1_expression=2.54349730978779,0.642301571672949,2.53717927372748,4.00293193412522,2.68176656656373,2.61701557230111,0,1.26343974685366,0.261185628199839,0.245733936501509,0,1.09220686065086,1.58260186937072,2.59909341216098,1.65698687863958,4.70627602516243,4.21886169616784,2.92124036154949,4.87932798790507,0.984968464614303,0.612002073732759,0.313454721478088,1.71741592278634,1.77936752594749,1.88313959392204,3.97349709889347,3.7766271146975,5.35233312933019,7.47392126012918,1.15148819429164,0.309632246632152,0,1.50602959389125,0.369754010166788,0.232401601740905,0.710846162437108,2.93600439334847,0,0,0.651032612147555,0.447830948479849,0.971680998056939,0.257575567634187,0.290796477559129,1.51150377475524,0,0.464858073811369,1.23350366406548,0,0.28769239232215,0.256160706529101,0,0.344745680736619,1.29096936716765,4.06279459783025,0,0.545812300115692,0.449446968890169,0.612167784741805,0.320929027076094,0.639337125799041,0.659702600373432,0.199463657621632,0.426224750532694,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0.949387162322653,0,0.425208599930087,0,0.336985893439485,0.450530678524519,0.64290234678832,0,0.59675003159727,0.182664153764634,0,1.63841583378639,1.77901850772711,0.426730222566507,2.00197993518006,1.14950487990897,0.661044872784862,0,1.70763890732835,0.587237189370939,0,2.64342657158052,2.80254281490768,3.16060901730092,1.37696839079683,1.57204305099666,0.616804496998528,1.67186495390678,1.62961133316795,1.89379122293893,1.94826728407911,1.89397776704795,1.17842362989935,1.55073726208535,1.89562704635511,1.0247305578054,1.1705341280389,4.93313713811028,4.69795030235942,6.95527405764126,1.18629250529648,0.535081656179426,0,3.51258962362455,0.766440987203842,1.37450978193052,2.27717722817553,0.637130828648193,0,0,0.903450714466637,1.91979916731628,0,0.947109008176067,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,1.66221330396589,3.97583067623023,1.50401373190767,4.05570253090306,0.795285947051099,0.486634870302636,4.63220604103932,4.65631734671384,3.24988707064566,2.29213382120997,0,0.370784442784429,1.29818957461873,1.74129737299267,4.52057065764142,3.57735936458013,5.14795419702115,2.60020250930695,0.993812036833525,1.72046919021225,0.694281003215189,1.69592382577203,0.419499436209906,1.92582629358047,1.04497483268405,5.16833518338658,3.5576626268671,7.02913286805807,1.61131726843659,0,0.488124115096339,1.83831540172934,0,3.75058858793135,3.81699933464489,5.18012810223282,0,0,1.46561395144326,1.31780417436063,3.87780264148325,0,3.47880366186723,1.51956613997496,3.70745706277013,5.73673241497627,1.06400514659507,0.560677600142307,0,0.98667019366864,3.42332138939743,2.15537075311501,4.41347138406339,0.302714855289863,2.30470369792,0.234321431833797,0.936480230490962,0.570471821544449,0.747243402759005,2.58355897016283,1.29498355494505,2.10676210053373,2.04154171254893,2.21101771161182,0.619954687054593,0,0.494533858557114,0,0,3.03005005117319,2.87772595705518,1.6623846929051,2.63386572528503,0.30648779579902,1.50238058906597,2.83580457900053,5.202299434977,3.63047560991565,8.26534414522291,7.80236849819446,6.80146692973697,3.34932702059318,2.79175284497385,9.78902726999344,3.80004320128675,5.80597680761463,2.39329736469978,3.23292113637624,3.55009592516614,2.61955455391865,4.0694542154517,9.85630351132814,6.2731607735892,12.9062067925052,5.73276418809098,6.36142887943129,4.06678800043314,3.21349270547648,3.28017106138317,1.09493207722749,0,0.643240938192885,1.38134921352481,0.928735856063958,0,21.2952240071719,24.2761953712466,22.8960478389308,22.1690885192112,23.5309799619799,22.5407088155542,22.9213223872279,24.1352402104176,22.3153351028906,0,0,0,0,0,0,0,1.32438929824395,1.35287282397425,6.6911446016425,4.06076056011915,1.1240175325762,1.80952150340936,2.68506490959736,0,0,5.77325368101093,1.97081688457631,4.22671299248958,1.15493158208859,0,0.380508304469197,0,0.858486162094873,1.47730203652438,1.8720341211139,1.48631162288728,9.3733833986777,6.2153387433578,20.2738389056613,1.52249488594842,2.03443756959773,0.766765358330422,19.7065295158377,18.5782195767907,1.24396869324463,1.58531948758658,1.38866676769018,0.444485260045183,0.381988425558278,0,0,1.23392991243988,2.10240140490742,0.857479297891735,1.79409734952577,1.30788020649984,5.06034172164555,1.80980402060889,0,2.535908257668,1.86156681609409,0,0.771622122786426,0,0,1.57275793023962,0,1.64648067356154,0.977208552881205,1.06617584622764,0,2.71295439353627,7.84380112740265,3.59902768255405,3.64871341923571,0.502257091432126,0,2.87549826589899,1.14861935834114,0,1.01346914667305,3.28762116080613,2.86497541183833,3.02629888782524,0.394061520403854,0.215627574859517,0.641715181398742,2.03275699377971,2.60279707715243,0.773288812777695,1.17261385734044,0,0,0,1.24324654030811,1.34960640891054,0.500170521059677,2.71265023699736,1.24782516918484,3.7470087647404,1.89242898040722,1.52283839490527,0.902838299183157,0,0,4.64957918974806,1.10621501125022,3.0409265063829,0,0,0.82707210449155,1.07857100409308,0.533637789017222,0.303127571446259,0,0,2.97729369382532,3.37616341233737,1.68396056659844,4.10045277618243,4.09365799253363,4.50390979202101,0,1.3878872442239,0.532685175939381,1.14978018419333,0,0.929683027679674,1.69203229428271,3.60911646545913,0.184161977871793,3.3296189967736,3.45973219212762,2.22911505431021,2.25599806453706,16.4042668032403,0,0,5.17202981575091,3.4120015221269,1.36074964221213,4.53423423814493,1.54227252690289,0.541892875087706,0,6.11703055308092,3.3243040357149,2.46262230194396,0,0,2.05160100093111,1.31205858279882,1.30151357865721,0.618246069886334,0.732555718546747,1.81520899825294,1.14853107599234,1.95018073810956,6.42735719376638,0.386682873168488,2.31072925671967,1.68854042198743,2.06754858726796,0.966782203814463,0.580066775656914,2.30111894023472,0.979352392114111,1.15699440752685,0.192190067365106,1.78657797492418,0.50578890427775,0.464845549297286,11.333244485903,0.6970372701606,0.308033580176089,0.532306030317022,3.47973196830029,1.48259375283136,1.28812398067792,1.86079184679834,4.42931194606216,4.95638504201945,0.255897791311334,1.28381696410176,0,0,1.97859703341646,4.94166653524899,2.82749765629647,0.202182481573316,0,0.842516912477962,0.48763373908959,0.731140468893853,2.11300293513511,1.22849920267187,2.40389234321312,2.26016233240486,0.551365343546124,1.99031692572366,3.5076070820301,0,0.655894752046633,0.608731130888112,0.30982349809975,0.281695602532241,2.00775893085672,2.75097314836739,0.35667105148125,4.61189383291777,3.37772216476263,1.97576935775941,0,0.349934720244983,0.384888450902048,0.670302275535787,0,0.941438007767792,0,0,0,3.21612760289743,0.507447609232169,0.764637207142375,0.569647187174163,1.19115887728894,1.23408681925858,1.29694662238543,1.08006287447623,2.37937552888281,1.49553699578462,0,2.69544237579135,2.9728508020115,1.00988449083511,1.63626239701352,1.75368900001705,4.19116680008915,1.7235483311913,8.6786168916792,2.27235358192189,5.33514638415572,2.51058146936511,2.50687833236837,12.5317238545034,5.2480451118497,3.37234957717769,1.81619736471943,8.51692475380653,1.71752672377882,3.6868891717015,3.57881772627865,3.67068111766199,5.08009048045305,4.73290495621912,6.15436994738562,4.32729085561573,5.32915148796512,1.4098700508785,0,2.93016358543788,8.73795756596497,1.33732061132974,0.284136146806413,1.19372242368845,1.78178808499583,1.84296421259539,41.7542012061845,10.8315450636095,0.333926115068718,1.31843099381408,1.26675244876796,0.597743964753209,0.276283915531148,1.25966373927138,1.1249555075237,0.615424027305347,1.24415835064723,1.61763032065188,0.358042349351218,0,0.789147245095469,0,2.22273980289274,9.69332746095218,22.3571116570062,0,1.04171104434093,0.699679999969566,0.724999575434793,0.910347586283997,0.762760950878299,5.2005289988946,0.689486746482929,0.583209226766509,0.694499979733169,1.77148277162768,2.29133233388275,0,1.10579259931225,0,23.4742374954751,1.96089234334182,0,1.53900517007594,3.19037756371603,7.14748103602986,2.78248697670294,5.64966333994442,0.638002319463839,1.4655614944298,1.06606955203727,2.04386596391473,1.8837630767403,1.16348177330109,3.60953056987489,3.13700054908383,3.85989650044438,4.55408958538044,1.90723894776454,4.85295548414462,2.61172493054636,2.82706142867882,0.865554558968364,0,0.707660516026713,0.611030144933625,2.37216902944498,2.71840665682306,1.98401704060365,0.943615861729479,0,1.40558667435203,0.182454789215666,0.978323094660449,7.28341138602278,0.789168805698781,0,1.83643656978294,0.947798694427319,0.751617097072463,2.59220478493118,0,0,0,1.19472429772959,1.42304773014896,6.93373365065693,1.90915712168644,0.0979923974143777,2.52471699083167,0.34945333648406,1.89184635718778,11.5140034234011,6.43185990358433,7.39039113478883,0.678923115418936,0.353024506766001,0.90392296312213,5.34463506122329,1.58971689362392,30.5791144466894,1.75996244461323,2.00397050628834,0.640358984218058,0.599428828746391,0.72045208577053,7.78848853928227,1.88754497648161,2.16082196982225,1.24252535565433,3.06402245001834,1.08723364858891,1.15063130943567,1.83596791745379,1.73370353940911,0,1.23214841002794,2.55493176133945,2.14882720709979,0.262887354279314,1.95497680890578,0.458320848023367,0.717873024576814,0.199679000498991,0,0,1.41085292222125,1.80149941771202,1.16495949527454,1.6544468284517,1.7307330260045,1.68508859635462,0.78741985211799,1.52411997718412,14.3141344165675,3.13267834056624,4.66184130548556,8.9400633788202,7.06248574649615,1.1248694577575,0.77380195455795,20.9585970470185,0,1.41850273138557,0.577000469484979,0.633602019116439,0.35857467866569,0.959575986597226,0,0.662091970365432,15.0018437216302,1.62899880526114,1.72844298240254,2.28611152076586,1.19730191562487,1.8881279772348,2.21504428321048,2.37955392192264,0,0,7.36912851260838,2.38018683136842,0.855434189421647,0,1.06787412567695,4.08731193259131,1.24271716604159,0,0.790446527591777,0.243585196761792,1.91502377331055,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,1.25643277000187,54.0501589779861,31.8488551394124,19.4045942595075,1.72022758707021,1.99672292766334,2.11127770000704,1.93688088910723,11.2482367165896,1.06154382279153,0.856396000634902,0.941063278792687,0.468334905806882,0.434763085832475,0.597019211547496,2.10341978862502,2.21922344601045,1.51522404220071,2.0125432140206,1.77962244319307,1.83072054717539,4.83938956042365,4.04136721515229,3.99208904972012,3.82312241192886,0,2.01841843939137,3.31764966272684,2.12673371646396,0,3.00515217994437,9.13932509205109,8.13741466409323,2.72772988803839,2.90008504014719,1.85613503951397,1.99047944349308,1.60011105865261,1.03018711554838,1.34699795506368,0,7.12693372507022,2.57329909649911,1.82696004375648,2.72047110614727,2.31522474323834,0.244736704506468,0.71635536432595,5.24962460173653,9.2099300823057,5.30067437837643,5.2086790333147,2.19625172848994,1.53744911152768,1.72715170865599,0.911579868532147,16.452753902056,0.584580926518165,0,0.327130788511688,0.327609848846413,0.983091635014877,0.633936370075881,0.39997479170986,0.746842107858986,0,2.27006381426734,2.02516545277025,0,0,0.383683113910955,2.58779547352036,0.314531883711793,0.54604819096007,0.848662649770126,0,0.371807292777007,1.11728983594649,1.59002175326709,1.41951141002256,0,0.352675943690684,2.1437183414724,16.3142231745007,9.91876034279095,4.46974805360024,13.7427964041306,0.756215088665154,2.90460460349715,22.1221634515636,0,0.294443155503077,1.53360640352062,0.366857197043358,0.462102664601353,2.288292572803,1.3807198521202,0.994581110581374,0.977734268540344,3.22728109925632,0,3.14288033377707,1.31017534008077,0.887136517302272,24.9213687241876,27.3377334514847,14.2613889585817,18.1369217154574,1.64092442705466,0,0,2.28632617667507,0.766574565837572,0.535701835878287,0.336283722218824,1.21393120847326,1.36597314810779,1.24183318227694,0.345701962667338,5.31612829255997,5.23366943921604,9.47127939305027,0.354581522651905,1.4460082245969,1.33438257845874,3.92788974790005,0,2.73947616152849,25.6953833550159,0.47775168788705,0.357382720883282,1.58013611732727,1.51113852978563,0.521574816907738,1.60342272946051,1.24329698497822,0.51215543128185,0,0.430227358820278,0.236664001461131,0.170426809518315,1.69354820076372,2.52017555398455,3.41227024230752,2.8666168169323,2.23710863595585,0.196300467230486,0.609589624911347,0,0.410651227424988,0,3.88568794447312,0.701818390386317,1.39265542612958,0.713520544665411,0.45178432815584,1.31928620094515,0.301925687133347,0.154348316215889,0.655678681511872,0,0.245148321753905,0.235676547101626,3.33724394095407,2.37637120261669,4.226557275834,3.56846940844415,2.16163011353663,0.773494655682926,4.4973520166218,0,0.352894871715692,0.0802413666891683,0,0,1.29005624836306,0.157771562193185,9.2468426659644,2.18175345170189,0.5290268405154,1.11598505450025,3.69740502905135,3.02838593486652,2.27099564703142,2.29457701123761,0.380095503034311,1.73381010561369,0.534434810531121,3.6757959813938,9.0254714145255,1.74291005901951,1.87574891109325,4.1458471972939,0.930896962757057,0.213233981900981,2.61870874610114,1.29177819672012,1.42771842880473,1.23345048838675,2.5458863311266,0.606351566874658,0.653150243690884,1.36893320434112,0.5388164241167,1.29099969706817,1.99596213927608,1.22104902916462,0.320182037633146,1.9307228228694,0.718601616852695,0,1.4668973301944,1.22068853494722,0.665756774185513,1.00636896795513,0.320568492303233 | |||
|short_description=p3@SLC39A10 | |||
}} |
Revision as of 07:40, 21 January 2014
Short description: | p3@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC39A10_5end |
Coexpression cluster: | C4164_medial_amygdala_frontal_Mast_Hep2_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000359634, ENST00000412905, ENST00000430412, NM_020342, uc002uth.3, uc010zgp.1_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | Q9ULF5C9J0F5F2Z341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 3.03e-10 | 32 |
regional part of cerebral cortex | 3.73e-10 | 22 |
brain grey matter | 5.12e-10 | 34 |
gray matter | 5.12e-10 | 34 |
cerebral cortex | 8.28e-10 | 25 |
pallium | 8.28e-10 | 25 |
regional part of telencephalon | 2.22e-09 | 32 |
neocortex | 2.60e-09 | 20 |
telencephalon | 2.84e-09 | 34 |
central nervous system | 3.52e-08 | 81 |
larynx | 7.29e-08 | 9 |
regional part of forebrain | 2.36e-07 | 41 |
forebrain | 2.36e-07 | 41 |
anterior neural tube | 2.36e-07 | 41 |
future forebrain | 2.36e-07 | 41 |
brain | 5.09e-07 | 68 |
future brain | 5.09e-07 | 68 |
neural tube | 9.61e-07 | 56 |
neural rod | 9.61e-07 | 56 |
future spinal cord | 9.61e-07 | 56 |
neural keel | 9.61e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.78e-08 | 31 |
leukemia | 2.20e-07 | 39 |