FFCP PHASE1:Hg19::chr5:36241961..36241976,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26404 | |||
|TSSclassifier=strong | |||
|UniProt=Q4G0N4 | |||
|association_with_transcript=-61bp_to_ENST00000381937,ENST00000514504,NM_001085411,uc003jkf.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_NADKD1_5end | |||
|id=chr5:36241961..36241976,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.72e-16!57;UBERON:0005068!1.72e-16!57;UBERON:0006241!1.72e-16!57;UBERON:0007135!1.72e-16!57;UBERON:0002616!1.74e-15!59;UBERON:0001893!2.46e-15!34;UBERON:0001017!7.46e-15!82;UBERON:0002020!8.67e-15!34;UBERON:0003528!8.67e-15!34;UBERON:0002791!9.76e-15!33;UBERON:0000955!1.17e-14!69;UBERON:0006238!1.17e-14!69;UBERON:0001869!1.79e-14!32;UBERON:0002780!7.28e-14!41;UBERON:0001890!7.28e-14!41;UBERON:0006240!7.28e-14!41;UBERON:0005743!2.55e-13!86;UBERON:0003080!6.35e-13!42;UBERON:0000073!1.41e-12!94;UBERON:0001016!1.41e-12!94;UBERON:0002619!1.42e-12!22;UBERON:0000956!2.52e-12!25;UBERON:0000203!2.52e-12!25;UBERON:0007023!7.56e-12!115;UBERON:0001950!2.04e-11!20;UBERON:0002346!1.10e-09!90;UBERON:0003075!1.14e-09!86;UBERON:0007284!1.14e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.31e-16;22!UBERON:0001869;1.52e-16;32!UBERON:0001893;2.26e-16;34!UBERON:0002791;4.01e-16;32!UBERON:0003528;8.54e-16;34!UBERON:0002020;8.54e-16;34!UBERON:0001950;5.02e-15;20!UBERON:0000956;9.48e-15;25!UBERON:0000203;9.48e-15;25!UBERON:0002780;9.13e-14;41!UBERON:0001890;9.13e-14;41!UBERON:0000073;2.26e-12;53!UBERON:0002616;2.26e-12;53!UBERON:0001017;3.58e-10;75!UBERON:0000955;3.83e-09;68!UBERON:0001016;6.50e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.12e-23,56;UBERON:0005068,3.12e-23,56;UBERON:0006241,3.12e-23,56;UBERON:0007135,3.12e-23,56;UBERON:0000073,3.54e-21,53;UBERON:0002616,3.54e-21,53;UBERON:0001017,6.83e-21,81;UBERON:0001893,1.14e-19,34;UBERON:0000955,3.66e-19,68;UBERON:0006238,3.66e-19,68;UBERON:0003528,6.25e-19,34;UBERON:0002020,6.25e-19,34;UBERON:0001869,1.77e-18,32;UBERON:0002780,1.80e-18,41;UBERON:0001890,1.80e-18,41;UBERON:0003080,1.80e-18,41;UBERON:0006240,1.80e-18,41;UBERON:0001016,3.31e-18,89;UBERON:0002791,5.54e-18,32;UBERON:0002619,7.96e-17,22;UBERON:0007023,3.14e-15,114;UBERON:0001950,3.22e-15,20;UBERON:0000956,7.39e-15,25;UBERON:0000203,7.39e-15,25;UBERON:0003075,1.30e-13,82;UBERON:0007284,1.30e-13,82;UBERON:0002346,7.85e-13,86;UBERON:0010314,2.00e-10,132;UBERON:0011216,2.36e-10,223;UBERON:0003056,6.97e-10,61;UBERON:0010371,3.72e-09,104;UBERON:0000025,1.35e-07,192 | |||
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| |||
|short_description=p3@NADKD1 | |||
}} |
Revision as of 05:03, 22 January 2014
Short description: | p3@NADKD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NADKD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -61bp_to_ENST00000381937, ENST00000514504, NM_001085411, uc003jkf.3_5end |
EntrezGene: | NADKD1 |
HGNC: | 26404 |
UniProt: | Q4G0N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.12e-23 | 56 |
neural rod | 3.12e-23 | 56 |
future spinal cord | 3.12e-23 | 56 |
neural keel | 3.12e-23 | 56 |
regional part of nervous system | 3.54e-21 | 53 |
regional part of brain | 3.54e-21 | 53 |
central nervous system | 6.83e-21 | 81 |
telencephalon | 1.14e-19 | 34 |
brain | 3.66e-19 | 68 |
future brain | 3.66e-19 | 68 |
brain grey matter | 6.25e-19 | 34 |
gray matter | 6.25e-19 | 34 |
cerebral hemisphere | 1.77e-18 | 32 |
regional part of forebrain | 1.80e-18 | 41 |
forebrain | 1.80e-18 | 41 |
anterior neural tube | 1.80e-18 | 41 |
future forebrain | 1.80e-18 | 41 |
nervous system | 3.31e-18 | 89 |
regional part of telencephalon | 5.54e-18 | 32 |
regional part of cerebral cortex | 7.96e-17 | 22 |
adult organism | 3.14e-15 | 114 |
neocortex | 3.22e-15 | 20 |
cerebral cortex | 7.39e-15 | 25 |
pallium | 7.39e-15 | 25 |
neural plate | 1.30e-13 | 82 |
presumptive neural plate | 1.30e-13 | 82 |
neurectoderm | 7.85e-13 | 86 |
structure with developmental contribution from neural crest | 2.00e-10 | 132 |
organ system subdivision | 2.36e-10 | 223 |
pre-chordal neural plate | 6.97e-10 | 61 |
ecto-epithelium | 3.72e-09 | 104 |
tube | 1.35e-07 | 192 |