FFCP PHASE1:Hg19::chr5:110074685..110074756,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25198 | |||
|TSSclassifier=strong | |||
|UniProt=Q96AG3,B4DTA3,B3KRE6 | |||
|association_with_transcript=0bp_to_ENST00000355943,ENST00000447245,ENST00000514046,NM_138773,uc003koz.2_5end | |||
|description=CAGE_peak_1_at_SLC25A46_5end | |||
|id=chr5:110074685..110074756,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.93e-07!53;CL:0000051!9.93e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.93e-07,53;CL:0000051,9.93e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!7.95e-13!59;UBERON:0002780!1.87e-12!41;UBERON:0001890!1.87e-12!41;UBERON:0006240!1.87e-12!41;UBERON:0001017!2.39e-12!82;UBERON:0000955!4.54e-12!69;UBERON:0006238!4.54e-12!69;UBERON:0000073!6.39e-12!94;UBERON:0001016!6.39e-12!94;UBERON:0003080!1.08e-11!42;UBERON:0005743!1.42e-11!86;UBERON:0001049!3.50e-11!57;UBERON:0005068!3.50e-11!57;UBERON:0006241!3.50e-11!57;UBERON:0007135!3.50e-11!57;UBERON:0001893!7.13e-11!34;UBERON:0000153!1.18e-10!129;UBERON:0007811!1.18e-10!129;UBERON:0001869!2.20e-10!32;UBERON:0002791!2.75e-10!33;UBERON:0007023!2.88e-10!115;UBERON:0002020!4.54e-10!34;UBERON:0003528!4.54e-10!34;UBERON:0000033!5.74e-10!123;UBERON:0000956!1.06e-08!25;UBERON:0000203!1.06e-08!25;UBERON:0002619!2.34e-08!22;UBERON:0004121!7.72e-08!169;UBERON:0001950!8.11e-08!20;UBERON:0003056!5.51e-07!61;UBERON:0000924!7.79e-07!173;UBERON:0006601!7.79e-07!173;UBERON:0003075!8.89e-07!86;UBERON:0007284!8.89e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.41e-09;34!UBERON:0001869;2.37e-09;32!UBERON:0002791;3.07e-09;32!UBERON:0003528;7.30e-09;34!UBERON:0002020;7.30e-09;34!UBERON:0002780;8.62e-09;41!UBERON:0001890;8.62e-09;41!UBERON:0000956;1.09e-08;25!UBERON:0000203;1.09e-08;25!UBERON:0002619;2.69e-08;22!UBERON:0000073;6.30e-08;53!UBERON:0002616;6.30e-08;53!UBERON:0001950;9.52e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.84e-13,89;UBERON:0001017,7.30e-13,81;UBERON:0000955,1.24e-12,68;UBERON:0006238,1.24e-12,68;UBERON:0002780,1.87e-12,41;UBERON:0001890,1.87e-12,41;UBERON:0003080,1.87e-12,41;UBERON:0006240,1.87e-12,41;UBERON:0000073,4.81e-12,53;UBERON:0002616,4.81e-12,53;UBERON:0001049,8.68e-12,56;UBERON:0005068,8.68e-12,56;UBERON:0006241,8.68e-12,56;UBERON:0007135,8.68e-12,56;UBERON:0001893,7.13e-11,34;UBERON:0001869,2.20e-10,32;UBERON:0002791,3.60e-10,32;UBERON:0003528,4.54e-10,34;UBERON:0002020,4.54e-10,34;UBERON:0007023,5.22e-10,114;UBERON:0000956,1.06e-08,25;UBERON:0000203,1.06e-08,25;UBERON:0002619,2.34e-08,22;UBERON:0001950,8.11e-08,20;UBERON:0004121,1.28e-07,171;UBERON:0000924,1.28e-07,171;UBERON:0006601,1.28e-07,171;UBERON:0003056,1.78e-07,61;UBERON:0011216,3.86e-07,223;UBERON:0003075,6.10e-07,82;UBERON:0007284,6.10e-07,82 | |||
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| |||
|short_description=p1@SLC25A46 | |||
}} |
Revision as of 06:51, 22 January 2014
Short description: | p1@SLC25A46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC25A46_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355943, ENST00000447245, ENST00000514046, NM_138773, uc003koz.2_5end |
EntrezGene: | SLC25A46 |
HGNC: | 25198 |
UniProt: | Q96AG3B4DTA3B3KRE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.93e-07 | 53 |
common lymphoid progenitor | 9.93e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.84e-13 | 89 |
central nervous system | 7.30e-13 | 81 |
brain | 1.24e-12 | 68 |
future brain | 1.24e-12 | 68 |
regional part of forebrain | 1.87e-12 | 41 |
forebrain | 1.87e-12 | 41 |
anterior neural tube | 1.87e-12 | 41 |
future forebrain | 1.87e-12 | 41 |
regional part of nervous system | 4.81e-12 | 53 |
regional part of brain | 4.81e-12 | 53 |
neural tube | 8.68e-12 | 56 |
neural rod | 8.68e-12 | 56 |
future spinal cord | 8.68e-12 | 56 |
neural keel | 8.68e-12 | 56 |
telencephalon | 7.13e-11 | 34 |
cerebral hemisphere | 2.20e-10 | 32 |
regional part of telencephalon | 3.60e-10 | 32 |
brain grey matter | 4.54e-10 | 34 |
gray matter | 4.54e-10 | 34 |
adult organism | 5.22e-10 | 114 |
cerebral cortex | 1.06e-08 | 25 |
pallium | 1.06e-08 | 25 |
regional part of cerebral cortex | 2.34e-08 | 22 |
neocortex | 8.11e-08 | 20 |
ectoderm-derived structure | 1.28e-07 | 171 |
ectoderm | 1.28e-07 | 171 |
presumptive ectoderm | 1.28e-07 | 171 |
pre-chordal neural plate | 1.78e-07 | 61 |
organ system subdivision | 3.86e-07 | 223 |
neural plate | 6.10e-07 | 82 |
presumptive neural plate | 6.10e-07 | 82 |