FFCP PHASE1:Hg19::chr7:100780263..100780339,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8583 | |||
|TSSclassifier=strong | |||
|UniProt=P05121 | |||
|association_with_transcript=0bp_to_X04731_5end | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_9_at_SERPINE1_5end | |||
|id=chr7:100780263..100780339,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.02e-35!119;CL:0000055!2.12e-30!180;CL:0000144!1.62e-23!625;CL:0000680!2.65e-23!57;CL:0000056!2.65e-23!57;CL:0000355!2.65e-23!57;CL:0000183!9.99e-23!59;CL:0000192!4.59e-22!42;CL:0000514!4.59e-22!42;CL:0000187!7.79e-22!54;CL:0002371!1.36e-21!591;CL:0000220!3.25e-21!246;CL:0002321!1.42e-20!248;CL:0000359!2.24e-20!32;CL:0000393!3.51e-18!60;CL:0000211!3.51e-18!60;CL:0000548!4.10e-18!679;CL:0000004!4.10e-18!679;CL:0000255!4.10e-18!679;CL:0000012!1.78e-17!682;CL:0000057!4.50e-16!75;CL:0000213!1.87e-12!57;CL:0000215!1.87e-12!57;CL:0002139!2.61e-11!24;CL:0000115!1.20e-10!35;CL:0000003!7.75e-10!722;CL:0002078!1.75e-09!44;CL:0000071!2.66e-08!18;CL:0002546!2.66e-08!18;CL:0000048!2.80e-08!430;CL:0002539!3.16e-08!10;CL:0000723!4.09e-08!436;CL:0002620!2.34e-07!23;CL:0000034!3.53e-07!444;CL:0002494!4.77e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.49e-25;32!CL:0000192;4.13e-17;43!CL:0002139;1.11e-12;24!CL:0000187;2.45e-12;55!CL:0000115;1.18e-11;36!CL:0002539;1.14e-10;10!CL:0000393;7.59e-09;61!CL:0000211;7.59e-09;61!CL:0000071;1.24e-08;18!CL:0000213;1.73e-08;58!CL:0000215;1.73e-08;58!CL:0000134;5.98e-08;55!CL:1000413;7.43e-08;9!CL:0002494;1.17e-07;16!CL:0002078;1.23e-07;45!CL:0000723;5.64e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.07e-37,121;CL:0000359,1.58e-26,32;CL:0000192,1.01e-23,43;CL:0000514,1.01e-23,43;CL:0000680,1.22e-23,58;CL:0000056,1.22e-23,58;CL:0000355,1.22e-23,58;CL:0000187,9.89e-22,55;CL:0000393,5.79e-19,61;CL:0000211,5.79e-19,61;CL:0002321,1.39e-15,250;CL:0000213,3.33e-14,58;CL:0000215,3.33e-14,58;CL:0000115,2.41e-13,36;CL:0002139,9.24e-13,24;CL:0000057,1.32e-12,76;CL:0000048,3.65e-12,427;CL:0000723,1.99e-11,433;CL:0002078,5.04e-11,45;CL:0002539,9.63e-11,10;CL:0000034,1.72e-10,441;CL:0000071,9.56e-09,18;CL:0002546,9.56e-09,18;CL:1000413,6.97e-08,9;CL:0002494,1.35e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.13e-17;43!CL:0000355;6.81e-12;58!CL:0000222;3.89e-10;121!CL:0002546;1.24e-08;18 | |||
|ontology_enrichment_disease=DOID:2394!1.93e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.44e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.47e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.32e-34!79;UBERON:0007798!1.32e-34!79;UBERON:0000055!1.93e-33!69;UBERON:0004872!1.99e-30!84;UBERON:0001981!9.09e-30!60;UBERON:0007500!9.09e-30!60;UBERON:0004537!9.09e-30!60;UBERON:0006965!9.09e-30!60;UBERON:0003914!2.90e-28!118;UBERON:0001637!2.66e-26!42;UBERON:0003509!2.66e-26!42;UBERON:0004572!2.66e-26!42;UBERON:0004535!5.93e-26!110;UBERON:0001009!8.38e-25!113;UBERON:0000486!1.24e-23!82;UBERON:0000490!1.53e-23!138;UBERON:0004290!1.26e-22!70;UBERON:0004573!6.17e-21!33;UBERON:0004571!6.17e-21!33;UBERON:0000914!9.15e-21!83;UBERON:0002329!9.15e-21!83;UBERON:0003077!9.15e-21!83;UBERON:0003059!9.15e-21!83;UBERON:0007282!9.15e-21!83;UBERON:0009618!9.15e-21!83;UBERON:0007285!9.15e-21!83;UBERON:0001134!1.33e-20!61;UBERON:0002036!1.33e-20!61;UBERON:0003082!1.33e-20!61;UBERON:0002385!2.79e-20!63;UBERON:0001015!2.79e-20!63;UBERON:0000383!2.79e-20!63;UBERON:0005256!3.71e-20!143;UBERON:0002100!1.92e-16!216;UBERON:0000947!2.46e-13!21;UBERON:0010191!2.46e-13!21;UBERON:0000119!8.22e-13!312;UBERON:0000483!1.30e-12!309;UBERON:0000468!1.66e-09!659;UBERON:0000926!3.05e-09!448;UBERON:0004120!3.05e-09!448;UBERON:0006603!3.05e-09!448;UBERON:0000467!3.78e-09!625;UBERON:0004111!4.87e-09!241;UBERON:0000480!5.38e-09!626;UBERON:0000487!5.47e-09!22;UBERON:0000475!7.00e-09!365;UBERON:0003104!1.16e-08!238;UBERON:0009142!1.16e-08!238;UBERON:0001986!2.66e-08!18;UBERON:0004638!2.66e-08!18;UBERON:0004852!2.66e-08!18;UBERON:0004237!3.16e-08!10;UBERON:0004695!3.16e-08!10;UBERON:0002111!3.16e-08!10;UBERON:0004178!3.16e-08!10;UBERON:0006914!3.83e-08!25;UBERON:0000477!5.16e-08!286;UBERON:0000025!5.50e-08!194;UBERON:0001135!7.64e-08!15;UBERON:0003081!1.18e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.80e-24;33!UBERON:0004571;1.80e-24;33!UBERON:0001637;1.94e-24;42!UBERON:0003509;1.94e-24;42!UBERON:0004572;1.94e-24;42!UBERON:0007500;1.40e-20;56!UBERON:0001981;1.40e-20;56!UBERON:0004537;1.40e-20;56!UBERON:0000055;2.09e-19;65!UBERON:0002049;1.10e-16;75!UBERON:0007798;1.10e-16;75!UBERON:0000947;1.81e-16;21!UBERON:0010191;1.81e-16;21!UBERON:0003914;6.77e-15;74!UBERON:0004237;1.14e-10;10!UBERON:0004695;1.14e-10;10!UBERON:0002111;1.14e-10;10!UBERON:0004178;1.14e-10;10!UBERON:0000487;8.47e-10;22!UBERON:0004535;5.23e-09;109!UBERON:0001009;7.73e-09;112!UBERON:0004638;1.24e-08;18!UBERON:0001986;1.24e-08;18!UBERON:0004852;1.24e-08;18!UBERON:0001135;4.85e-08;15!UBERON:0006914;6.03e-08;25!UBERON:0003915;7.43e-08;9!UBERON:0004700;7.43e-08;9!UBERON:0001917;7.43e-08;9!UBERON:0000025;8.73e-08;93!UBERON:0001473;1.24e-07;8!UBERON:0004536;1.24e-07;8!UBERON:0006558;1.24e-07;8!UBERON:0003513;1.75e-07;7!UBERON:0002385;4.06e-07;31!UBERON:0001015;4.06e-07;31!UBERON:0000383;4.06e-07;31!UBERON:0000490;8.39e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.70e-40,68;UBERON:0002049,7.37e-40,78;UBERON:0007798,7.37e-40,78;UBERON:0007500,8.98e-35,59;UBERON:0001981,8.98e-35,59;UBERON:0004537,8.98e-35,59;UBERON:0006965,8.98e-35,59;UBERON:0001637,1.99e-34,42;UBERON:0003509,1.99e-34,42;UBERON:0004572,1.99e-34,42;UBERON:0004872,3.74e-34,83;UBERON:0004535,6.85e-32,109;UBERON:0003914,9.49e-31,117;UBERON:0001009,2.79e-30,112;UBERON:0007503,7.55e-28,78;UBERON:0004573,5.01e-27,33;UBERON:0004571,5.01e-27,33;UBERON:0002329,4.42e-24,71;UBERON:0003059,4.42e-24,71;UBERON:0007282,4.42e-24,71;UBERON:0004290,4.42e-24,71;UBERON:0009618,4.42e-24,71;UBERON:0003077,1.78e-23,72;UBERON:0007285,1.78e-23,72;UBERON:0000486,3.57e-23,83;UBERON:0007524,6.91e-23,73;UBERON:0000490,2.13e-22,148;UBERON:0001134,5.23e-21,62;UBERON:0002036,5.23e-21,62;UBERON:0003082,5.23e-21,62;UBERON:0005256,2.90e-20,122;UBERON:0002385,7.96e-20,64;UBERON:0001015,7.96e-20,64;UBERON:0000383,7.96e-20,64;UBERON:0000947,1.39e-16,21;UBERON:0010191,1.39e-16,21;UBERON:0003104,1.34e-15,160;UBERON:0009142,1.34e-15,160;UBERON:0000926,3.95e-15,315;UBERON:0004120,3.95e-15,315;UBERON:0006603,3.95e-15,315;UBERON:0002100,5.70e-15,199;UBERON:0004237,9.63e-11,10;UBERON:0004695,9.63e-11,10;UBERON:0002111,9.63e-11,10;UBERON:0004178,9.63e-11,10;UBERON:0000119,1.51e-10,309;UBERON:0000025,1.58e-10,192;UBERON:0000483,3.07e-10,306;UBERON:0000487,4.88e-10,22;UBERON:0003081,1.17e-09,203;UBERON:0004111,3.61e-09,240;UBERON:0004638,9.56e-09,18;UBERON:0001986,9.56e-09,18;UBERON:0004852,9.56e-09,18;UBERON:0006914,3.81e-08,25;UBERON:0001135,4.64e-08,15;UBERON:0003915,6.97e-08,9;UBERON:0004700,6.97e-08,9;UBERON:0001917,6.97e-08,9;UBERON:0001473,1.48e-07,8;UBERON:0004536,1.48e-07,8;UBERON:0006558,1.48e-07,8;UBERON:0003513,2.00e-07,7 | |||
|phase1_expression=4.90531624030503,2.14100523890983,3.66481450649525,2.00146596706261,2.23480547213644,5.23403114460221,5.06599756336621,12.0026775951098,0,4.91467873003018,4.18680700783456,1.09220686065086,1.05506791291381,0.37129905888014,0,16.1358035148426,7.8350288643117,9.49403117503585,8.78279037822912,0.246242116153576,2.24400760368678,0.940364164434263,0,0.547497700291537,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0.344745680736619,0,0,0.564727018627814,0.545812300115692,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,1.44575660953827,1.50401373190767,0.724232594804119,0,0,0.378139268656271,3.32594096193846,1.49319135678314,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0,2.18638648103376,3.4409383804245,2.77712401286075,5.6530794192401,3.77549492588915,5.22724279686128,6.06085402956751,2.58416759169329,1.06729878806013,3.68192674041137,11.6820501961653,5.32190474002959,3.90499292077071,4.77962004449629,19.4434067491622,0.892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,1.89853131913626,3.11442964681692,0,0,0,13.4182426957736,7.97772223486853,8.474187572046,5.16305917347865,2.4826786753885,3.36406560085384,8.5399196583764,7.4000264525148,0.933633106199299,7.00495494762378,4.57693328717684,0.454072282934794,3.45705554687999,0.70296429550139,3.43376084513353,2.2818872861778,3.73621701379503,1.52664848236894,1.94247533241758,1.68540968042698,1.22492502752936,0.61417158655884,0.103325781175765,0,0.741800787835671,7.28129089550421,10.0606539854273,0.168336113954066,0.125118519871964,1.10825646193673,0,2.75839016219118,0.150238058906597,6.57906662328122,3.22901344239952,0.640672166455702,1.90738711043606,3.60109315301283,1.03052529238439,0.772921620136887,2.23340227597908,5.56961896396179,1.75386609290158,0.504867548488229,1.28869858099219,0.161646056818812,2.4850671476163,2.51880245569101,0.508681776931463,0.966304265816484,1.90922284413584,0.573609190778008,0,0,0,0.207322110030741,0,0,0,1.92972281457866,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,1.4763109092493,14.0241773803446,0.8231480226628,5.88034845542168,0,1.96565443335525,0,0,0,1.02940686179115,0.878002283269004,0,0.402115889646523,0.370353780634118,0,0,2.88662684050547,0.579652024875384,0.939269553886573,9.3838191044698,12.9635943521451,11.7957574385451,0,0,0,0,0,0,2.35174979478403,0.850650583454319,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.616964956219941,0,0,1.90622843387113,0,1.1734125731352,3.74887975697556,0,7.607724773004,0.797814349754612,1.04007436911366,0.771622122786426,2.83698264046557,4.26275486425759,3.57444984145369,0.542621605391443,1.64648067356154,5.21177894869976,3.55391948742546,6.33561498346743,15.0719688529793,4.35766729300147,7.59794732983634,0,0,0,2.39624855491583,0,0,6.80472141337622,2.26023954805422,3.58121926479791,0,0,0,0,0.254094624222463,0,1.54657762555539,0,0,0,0,0,0.12269149171914,0.500170521059677,0,2.9115920614313,4.63915370872621,1.73472656537328,0.702848489956279,2.10662269809403,2.27407504055985,2.0694614258501,0,0.737476674166813,0.955719759148911,0.587403472388222,0.343143423810856,0,0,0,1.21251028578504,0,0.907170879989041,4.21783273291921,1.99500565274481,2.24528075546459,6.15067916427365,2.55853624533352,9.97294311090366,2.96836132889982,2.00472601943452,4.6166048581413,0.739144404124282,0.519254429183621,1.51073491997947,0,16.6420370351726,0.276242966807689,0.68888668898764,0.910455840033585,0,0,0.693138033939733,0,1.46139224653261,0.633309773357254,2.27466768141793,4.25234263191289,1.72732732881711,9.25363516141736,1.35473218771926,1.50506932156456,0.254876273045038,0,1.11937377361089,0,0,0,0.328014645699706,1.95227036798582,1.854738209659,0,0,0.574265537996172,0.650060246036521,24.1025894766239,0.580024309752732,1.84858340537573,1.68854042198743,7.02966519671106,0.537101224341368,1.16013355131383,2.13066568540252,0.267096106940212,2.64455864577565,2.11409074101617,0.893288987462089,1.0115778085555,10.2266020845403,35.5737951918623,7.6674099717666,5.85263802334569,6.38767236380426,6.95946393660058,10.3781562698195,3.43499728180779,0.372158369359667,2.53103539774981,5.52827562379092,2.303080121802,0.855877976067841,1.90921948755562,10.20433232259,1.79872457583315,0.823611089208164,1.06031162111118,6.87420437349274,12.6808256938407,13.4802705996474,1.95053495635836,13.1605284400894,28.525539624324,0.818999468447914,0.848432591722276,5.65040583101214,2.2054613741845,19.9031692572366,18.414937180658,2.89387767133344,0.655894752046633,6.89895281673194,6.50629346009475,6.76069446077379,2.29458163526482,5.79669341977415,7.49009208110625,1.77380532035299,0.211107635297664,0.658589785919804,0,0,0.288666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| |||
|short_description=p9@SERPINE1 | |||
}} |
Revision as of 18:25, 22 January 2014
Short description: | p9@SERPINE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SERPINE1_5end |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | 0bp_to_X04731_5end |
EntrezGene: | SERPINE1 |
HGNC: | 8583 |
UniProt: | P05121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.07e-37 | 121 |
vascular associated smooth muscle cell | 1.58e-26 | 32 |
smooth muscle cell | 1.01e-23 | 43 |
smooth muscle myoblast | 1.01e-23 | 43 |
muscle precursor cell | 1.22e-23 | 58 |
myoblast | 1.22e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-23 | 58 |
muscle cell | 9.89e-22 | 55 |
electrically responsive cell | 5.79e-19 | 61 |
electrically active cell | 5.79e-19 | 61 |
embryonic cell | 1.39e-15 | 250 |
lining cell | 3.33e-14 | 58 |
barrier cell | 3.33e-14 | 58 |
endothelial cell | 2.41e-13 | 36 |
endothelial cell of vascular tree | 9.24e-13 | 24 |
fibroblast | 1.32e-12 | 76 |
multi fate stem cell | 3.65e-12 | 427 |
somatic stem cell | 1.99e-11 | 433 |
meso-epithelial cell | 5.04e-11 | 45 |
aortic smooth muscle cell | 9.63e-11 | 10 |
stem cell | 1.72e-10 | 441 |
blood vessel endothelial cell | 9.56e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.56e-09 | 18 |
endothelial cell of artery | 6.97e-08 | 9 |
cardiocyte | 1.35e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.47e-10 | 14 |