FFCP PHASE1:Mm9::chr10:106069742..106069754,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=362|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:106069742..106069754,+|id=chr10:106069742..106069754,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.06e-22!63;UBERON:0000955!7.02e-22!50;UBERON:0006238!7.02e-22!50;UBERON:0002616!1.42e-20!49;UBERON:0002346!2.63e-19!71;UBERON:0003075!2.63e-19!71;UBERON:0007284!2.63e-19!71;UBERON:0002021!1.11e-16!10;UBERON:0000411!1.11e-16!10;UBERON:0001950!1.11e-16!10;UBERON:0003056!2.39e-16!49;UBERON:0001049!1.27e-15!52;UBERON:0005068!1.27e-15!52;UBERON:0006241!1.27e-15!52;UBERON:0007135!1.27e-15!52;UBERON:0004121!1.01e-14!102;UBERON:0000924!1.01e-14!102;UBERON:0006601!1.01e-14!102;UBERON:0003080!5.96e-14!40;UBERON:0007811!1.05e-13!86;UBERON:0000956!1.79e-13!21;UBERON:0001869!1.79e-13!21;UBERON:0000203!1.79e-13!21;UBERON:0001017!1.97e-13!73;UBERON:0005743!1.97e-13!73;UBERON:0002791!2.09e-13!29;UBERON:0003528!2.09e-13!29;UBERON:0001893!2.09e-13!29;UBERON:0002619!5.94e-13!17;UBERON:0002780!7.51e-13!39;UBERON:0001890!7.51e-13!39;UBERON:0006240!7.51e-13!39;UBERON:0000073!7.59e-13!75;UBERON:0001016!7.59e-13!75;UBERON:0000153!9.61e-12!94;UBERON:0002020!1.02e-10!34|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.59e-17,10;UBERON:0000411,2.59e-17,10;UBERON:0001950,2.59e-17,10;UBERON:0002780,1.50e-16,39;UBERON:0001890,1.50e-16,39;UBERON:0006240,1.50e-16,39;UBERON:0000955,1.73e-16,47;UBERON:0006238,1.73e-16,47;UBERON:0003080,4.10e-16,40;UBERON:0000956,9.83e-16,21;UBERON:0001869,9.83e-16,21;UBERON:0000203,9.83e-16,21;UBERON:0003528,1.50e-14,29;UBERON:0002791,1.50e-14,29;UBERON:0001893,1.50e-14,29;UBERON:0002619,1.63e-14,17;UBERON:0000073,3.57e-14,54;UBERON:0002616,6.90e-14,46;UBERON:0003056,5.61e-13,49;UBERON:0002020,2.61e-12,34;UBERON:0001017,2.90e-12,73;UBERON:0001049,3.59e-12,52;UBERON:0005068,3.59e-12,52;UBERON:0006241,3.59e-12,52;UBERON:0007135,3.59e-12,52;UBERON:0001016,6.62e-12,75;UBERON:0002346,1.07e-09,64;UBERON:0003075,1.07e-09,64;UBERON:0007284,1.07e-09,64;UBERON:0004121,3.86e-09,95;UBERON:0000924,3.86e-09,95;UBERON:0006601,3.86e-09,95;UBERON:0010371,2.28e-08,73;UBERON:0001851,2.54e-08,1;UBERON:0005889,2.54e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.614426133024974,0,0,0,0,1.12552522006336,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.898743836428936,0.457500602818626,0,1.39059456153821,1.79000820131231,0.20778804455956,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0.460325236507177,1.71868654031819,1.54667864109319,2.05524755931193,0.755393897389701,0.675022500231806,0.900642406448441,2.26571204492102,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.17230640686684,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr10:106069742..106069754,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=362 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:106069742..106069754,+ | |||
|description=CAGE_peak_at_chr10:106069742..106069754,+ | |||
|id=chr10:106069742..106069754,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.06e-22!63;UBERON:0000955!7.02e-22!50;UBERON:0006238!7.02e-22!50;UBERON:0002616!1.42e-20!49;UBERON:0002346!2.63e-19!71;UBERON:0003075!2.63e-19!71;UBERON:0007284!2.63e-19!71;UBERON:0002021!1.11e-16!10;UBERON:0000411!1.11e-16!10;UBERON:0001950!1.11e-16!10;UBERON:0003056!2.39e-16!49;UBERON:0001049!1.27e-15!52;UBERON:0005068!1.27e-15!52;UBERON:0006241!1.27e-15!52;UBERON:0007135!1.27e-15!52;UBERON:0004121!1.01e-14!102;UBERON:0000924!1.01e-14!102;UBERON:0006601!1.01e-14!102;UBERON:0003080!5.96e-14!40;UBERON:0007811!1.05e-13!86;UBERON:0000956!1.79e-13!21;UBERON:0001869!1.79e-13!21;UBERON:0000203!1.79e-13!21;UBERON:0001017!1.97e-13!73;UBERON:0005743!1.97e-13!73;UBERON:0002791!2.09e-13!29;UBERON:0003528!2.09e-13!29;UBERON:0001893!2.09e-13!29;UBERON:0002619!5.94e-13!17;UBERON:0002780!7.51e-13!39;UBERON:0001890!7.51e-13!39;UBERON:0006240!7.51e-13!39;UBERON:0000073!7.59e-13!75;UBERON:0001016!7.59e-13!75;UBERON:0000153!9.61e-12!94;UBERON:0002020!1.02e-10!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.59e-17,10;UBERON:0000411,2.59e-17,10;UBERON:0001950,2.59e-17,10;UBERON:0002780,1.50e-16,39;UBERON:0001890,1.50e-16,39;UBERON:0006240,1.50e-16,39;UBERON:0000955,1.73e-16,47;UBERON:0006238,1.73e-16,47;UBERON:0003080,4.10e-16,40;UBERON:0000956,9.83e-16,21;UBERON:0001869,9.83e-16,21;UBERON:0000203,9.83e-16,21;UBERON:0003528,1.50e-14,29;UBERON:0002791,1.50e-14,29;UBERON:0001893,1.50e-14,29;UBERON:0002619,1.63e-14,17;UBERON:0000073,3.57e-14,54;UBERON:0002616,6.90e-14,46;UBERON:0003056,5.61e-13,49;UBERON:0002020,2.61e-12,34;UBERON:0001017,2.90e-12,73;UBERON:0001049,3.59e-12,52;UBERON:0005068,3.59e-12,52;UBERON:0006241,3.59e-12,52;UBERON:0007135,3.59e-12,52;UBERON:0001016,6.62e-12,75;UBERON:0002346,1.07e-09,64;UBERON:0003075,1.07e-09,64;UBERON:0007284,1.07e-09,64;UBERON:0004121,3.86e-09,95;UBERON:0000924,3.86e-09,95;UBERON:0006601,3.86e-09,95;UBERON:0010371,2.28e-08,73;UBERON:0001851,2.54e-08,1;UBERON:0005889,2.54e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.614426133024974,0,0,0,0,1.12552522006336,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.898743836428936,0.457500602818626,0,1.39059456153821,1.79000820131231,0.20778804455956,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0.460325236507177,1.71868654031819,1.54667864109319,2.05524755931193,0.755393897389701,0.675022500231806,0.900642406448441,2.26571204492102,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.17230640686684,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr10:106069742..106069754,+ | |||
}} |
Latest revision as of 19:58, 3 August 2015
Short description: | p@chr10:106069742..106069754, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:106069742..106069754, + |
Coexpression cluster: | MCL_coexpression_mm9:362 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.59e-17 | 10 |
visual cortex | 2.59e-17 | 10 |
neocortex | 2.59e-17 | 10 |
regional part of forebrain | 1.50e-16 | 39 |
forebrain | 1.50e-16 | 39 |
future forebrain | 1.50e-16 | 39 |
brain | 1.73e-16 | 47 |
future brain | 1.73e-16 | 47 |
anterior neural tube | 4.10e-16 | 40 |
cerebral cortex | 9.83e-16 | 21 |
cerebral hemisphere | 9.83e-16 | 21 |
pallium | 9.83e-16 | 21 |
brain grey matter | 1.50e-14 | 29 |
regional part of telencephalon | 1.50e-14 | 29 |
telencephalon | 1.50e-14 | 29 |
regional part of cerebral cortex | 1.63e-14 | 17 |
regional part of nervous system | 3.57e-14 | 54 |
regional part of brain | 6.90e-14 | 46 |
pre-chordal neural plate | 5.61e-13 | 49 |
gray matter | 2.61e-12 | 34 |
central nervous system | 2.90e-12 | 73 |
neural tube | 3.59e-12 | 52 |
neural rod | 3.59e-12 | 52 |
future spinal cord | 3.59e-12 | 52 |
neural keel | 3.59e-12 | 52 |
nervous system | 6.62e-12 | 75 |
neurectoderm | 1.07e-09 | 64 |
neural plate | 1.07e-09 | 64 |
presumptive neural plate | 1.07e-09 | 64 |
ectoderm-derived structure | 3.86e-09 | 95 |
ectoderm | 3.86e-09 | 95 |
presumptive ectoderm | 3.86e-09 | 95 |
ecto-epithelium | 2.28e-08 | 73 |
cortex | 2.54e-08 | 1 |
zygote cortex | 2.54e-08 | 1 |