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FFCP PHASE1:Mm9::chr8:85689247..85689259,+: Difference between revisions

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{{FFCP|EntrezGene=71310|HGNC=|UniProt=Q3UYK3,E9Q645|association_with_transcript=0bp_to_ENSMUST00000034145,ENSMUST00000168190,NM_001111304,NM_027758,uc009mju.2,uc009mjv.2_5end|description=CAGE_peak_10_at_Tbc1d9_5end|id=chr8:85689247..85689259,+|ontology_enrichment_celltype=CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-10,23;CL:0000337,2.52e-10,23;CL:0002319,2.23e-07,43;CL:0000221,3.88e-07,44;CL:0000133,3.88e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.63e-11!71;UBERON:0003075!7.63e-11!71;UBERON:0007284!7.63e-11!71;UBERON:0000073!1.56e-09!75;UBERON:0001016!1.56e-09!75;UBERON:0001049!1.92e-09!52;UBERON:0005068!1.92e-09!52;UBERON:0006241!1.92e-09!52;UBERON:0007135!1.92e-09!52;UBERON:0004121!2.57e-09!102;UBERON:0000924!2.57e-09!102;UBERON:0006601!2.57e-09!102;UBERON:0002020!5.68e-09!34;UBERON:0000033!8.04e-09!63;UBERON:0003056!1.05e-08!49;UBERON:0001017!1.13e-08!73;UBERON:0005743!1.13e-08!73;UBERON:0000955!7.97e-08!50;UBERON:0006238!7.97e-08!50;UBERON:0002616!2.46e-07!49;UBERON:0002791!6.09e-07!29;UBERON:0003528!6.09e-07!29;UBERON:0001893!6.09e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.40e-15,75;UBERON:0002020,4.81e-14,34;UBERON:0001017,1.66e-13,73;UBERON:0004121,3.17e-13,95;UBERON:0000924,3.17e-13,95;UBERON:0006601,3.17e-13,95;UBERON:0001049,6.24e-13,52;UBERON:0005068,6.24e-13,52;UBERON:0006241,6.24e-13,52;UBERON:0007135,6.24e-13,52;UBERON:0000073,2.51e-12,54;UBERON:0002346,4.09e-12,64;UBERON:0003075,4.09e-12,64;UBERON:0007284,4.09e-12,64;UBERON:0003528,3.37e-11,29;UBERON:0002791,3.37e-11,29;UBERON:0001893,3.37e-11,29;UBERON:0000955,1.58e-10,47;UBERON:0006238,1.58e-10,47;UBERON:0010371,6.20e-10,73;UBERON:0002616,2.05e-09,46;UBERON:0002780,8.54e-09,39;UBERON:0001890,8.54e-09,39;UBERON:0006240,8.54e-09,39;UBERON:0003056,1.28e-08,49;UBERON:0003080,1.72e-08,40;UBERON:0000956,2.54e-08,21;UBERON:0001869,2.54e-08,21;UBERON:0000203,2.54e-08,21;UBERON:0010314,8.98e-07,92|phase1_expression=0.320297694209588,0,0.454999239389536,0,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.680346321208558,0,0,0.159992422793407,0,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0.523523743973798,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,2.22548106945558,1.05798195854407,0.633831403506179,0,0,3.1496490104849,1.97773272513395,0.7104801149461,0.599200221036809,1.92109152660777,1.14058573539325,1.35005938331691,1.05162480675691,1.14260393761521,0.441737081903227,0.367472397644862,0.191690942036473,0.919218786610021,0,0.638436690425939,1.22885226604995,1.71452174049252,0.731901148819277,0.52091337055676,1.3959149950069,0,1.5279824777681,0.883885756421003,1.70846016958924,1.67759501242771,1.21161909333094,1.36028808192214,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.517875767294343,0.742210695324124,0,0,0.230615497256059,0.60289056221049,0.587943535678524,0.502666365318702,0,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0.585561594023094,3.14170060220183,0,0.838705871541442,0,0.254140454146129,0.898743836428936,0.457500602818626,1.00523481690292,2.9550134432687,0.767146371990992,0.83115217823824,1.46017136760982,0.203678727700633,0.497627882440372,1.51633655060205,0.210441855886474,0.390361328888111,0.689706313300419,0.360124259610698,0.60281927134286,0.884474488967262,1.40925092313335,3.27956035959051,0.517406741478031,0.215567992932842,0.378212160335639,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.486412857275134,0,0,0.268412837520744,0.841159794256509,2.36680608472354,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,1.1270773567308,0,0.387904974335251,0.0701358198903186,0.379419222745544,0,0,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,1.01254341007058,7.53956419696361,3.26343410291226,0.491764273019036,0,0.80275294993896,1.40654023910644,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0,2.24924921495265,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0.2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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:71310
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3UYK3,uniprot:E9Q645
|association_with_transcript=0bp_to_ENSMUST00000034145,ENSMUST00000168190,NM_001111304,NM_027758,uc009mju.2,uc009mjv.2_5end
|cluster_id=chr8:85689247..85689259,+
|description=CAGE_peak_10_at_Tbc1d9_5end
|id=chr8:85689247..85689259,+
|ontology_enrichment_celltype=CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-10,23;CL:0000337,2.52e-10,23;CL:0002319,2.23e-07,43;CL:0000221,3.88e-07,44;CL:0000133,3.88e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!7.63e-11!71;UBERON:0003075!7.63e-11!71;UBERON:0007284!7.63e-11!71;UBERON:0000073!1.56e-09!75;UBERON:0001016!1.56e-09!75;UBERON:0001049!1.92e-09!52;UBERON:0005068!1.92e-09!52;UBERON:0006241!1.92e-09!52;UBERON:0007135!1.92e-09!52;UBERON:0004121!2.57e-09!102;UBERON:0000924!2.57e-09!102;UBERON:0006601!2.57e-09!102;UBERON:0002020!5.68e-09!34;UBERON:0000033!8.04e-09!63;UBERON:0003056!1.05e-08!49;UBERON:0001017!1.13e-08!73;UBERON:0005743!1.13e-08!73;UBERON:0000955!7.97e-08!50;UBERON:0006238!7.97e-08!50;UBERON:0002616!2.46e-07!49;UBERON:0002791!6.09e-07!29;UBERON:0003528!6.09e-07!29;UBERON:0001893!6.09e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.40e-15,75;UBERON:0002020,4.81e-14,34;UBERON:0001017,1.66e-13,73;UBERON:0004121,3.17e-13,95;UBERON:0000924,3.17e-13,95;UBERON:0006601,3.17e-13,95;UBERON:0001049,6.24e-13,52;UBERON:0005068,6.24e-13,52;UBERON:0006241,6.24e-13,52;UBERON:0007135,6.24e-13,52;UBERON:0000073,2.51e-12,54;UBERON:0002346,4.09e-12,64;UBERON:0003075,4.09e-12,64;UBERON:0007284,4.09e-12,64;UBERON:0003528,3.37e-11,29;UBERON:0002791,3.37e-11,29;UBERON:0001893,3.37e-11,29;UBERON:0000955,1.58e-10,47;UBERON:0006238,1.58e-10,47;UBERON:0010371,6.20e-10,73;UBERON:0002616,2.05e-09,46;UBERON:0002780,8.54e-09,39;UBERON:0001890,8.54e-09,39;UBERON:0006240,8.54e-09,39;UBERON:0003056,1.28e-08,49;UBERON:0003080,1.72e-08,40;UBERON:0000956,2.54e-08,21;UBERON:0001869,2.54e-08,21;UBERON:0000203,2.54e-08,21;UBERON:0010314,8.98e-07,92
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.680346321208558,0,0,0.159992422793407,0,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0.523523743973798,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,2.22548106945558,1.05798195854407,0.633831403506179,0,0,3.1496490104849,1.97773272513395,0.7104801149461,0.599200221036809,1.92109152660777,1.14058573539325,1.35005938331691,1.05162480675691,1.14260393761521,0.441737081903227,0.367472397644862,0.191690942036473,0.919218786610021,0,0.638436690425939,1.22885226604995,1.71452174049252,0.731901148819277,0.52091337055676,1.3959149950069,0,1.5279824777681,0.883885756421003,1.70846016958924,1.67759501242771,1.21161909333094,1.36028808192214,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.517875767294343,0.742210695324124,0,0,0.230615497256059,0.60289056221049,0.587943535678524,0.502666365318702,0,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0.585561594023094,3.14170060220183,0,0.838705871541442,0,0.254140454146129,0.898743836428936,0.457500602818626,1.00523481690292,2.9550134432687,0.767146371990992,0.83115217823824,1.46017136760982,0.203678727700633,0.497627882440372,1.51633655060205,0.210441855886474,0.390361328888111,0.689706313300419,0.360124259610698,0.60281927134286,0.884474488967262,1.40925092313335,3.27956035959051,0.517406741478031,0.215567992932842,0.378212160335639,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.486412857275134,0,0,0.268412837520744,0.841159794256509,2.36680608472354,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,1.1270773567308,0,0.387904974335251,0.0701358198903186,0.379419222745544,0,0,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,1.01254341007058,7.53956419696361,3.26343410291226,0.491764273019036,0,0.80275294993896,1.40654023910644,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0,2.24924921495265,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0.632073515871632,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,0,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.484393280087717,0.241251699712623,0,0,0.291480836629851,1.11255181206306,0.854354403989263,0.619160603889667,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,1.5298058699447,1.11961161858926,1.10559979043539,0,0.632671987162271,0.203319467126849,0,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0.469428954583016,0.781226309063701,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0.360586348559907,0,0.201932899896295,0.304827226619999,0.201652370273681,0.292373642219257,0,0.350630706544707,0.226730383615211,0,0,0,0,0,0.36630324853453,0.214368379079066,0,2.25900737046827,0.460325236507177,0,3.43706364687375,0.685082519770642,1.5107877947794,0,0.900642406448441,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,1.19513524027894,0.486213434136588,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.565879024158229,0.468207537349412,0.448176066834085,0.631790158511746,0,0.347652977834566,0.964546102318525,1.23625770240992,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.188218760830661,0.423073039458382,0.365855945745545,0,0.543216455383447,0,0.355905054372522,0.591026894253381,0,0.464810523557898,1.15743966588685,0.999242311751784,0.467863216890817,0.214871054048298,0,0.220591419119515,0.695603506861264
|short_description=p10@Tbc1d9
}}

Revision as of 04:33, 4 August 2015

Short description:p10@Tbc1d9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Tbc1d9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000034145, ENSMUST00000168190, NM_001111304, NM_027758, uc009mju.2, uc009mjv.2_5end
EntrezGene:71310
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p10@Tbc1d9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.52e-1023
neuroblast (sensu Vertebrata)2.52e-1023
neural cell2.23e-0743
ectodermal cell3.88e-0744
neurectodermal cell3.88e-0744

Uber anatomy
Ontology termp-valuen
nervous system1.40e-1575
gray matter4.81e-1434
central nervous system1.66e-1373
ectoderm-derived structure3.17e-1395
ectoderm3.17e-1395
presumptive ectoderm3.17e-1395
neural tube6.24e-1352
neural rod6.24e-1352
future spinal cord6.24e-1352
neural keel6.24e-1352
regional part of nervous system2.51e-1254
neurectoderm4.09e-1264
neural plate4.09e-1264
presumptive neural plate4.09e-1264
brain grey matter3.37e-1129
regional part of telencephalon3.37e-1129
telencephalon3.37e-1129
brain1.58e-1047
future brain1.58e-1047
ecto-epithelium6.20e-1073
regional part of brain2.05e-0946
regional part of forebrain8.54e-0939
forebrain8.54e-0939
future forebrain8.54e-0939
pre-chordal neural plate1.28e-0849
anterior neural tube1.72e-0840
cerebral cortex2.54e-0821
cerebral hemisphere2.54e-0821
pallium2.54e-0821
structure with developmental contribution from neural crest8.98e-0792
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