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FFCP PHASE1:Mm9::chr14:52899021..52899034,-: Difference between revisions

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{{FFCP|EntrezGene=76338|HGNC=|UniProt=Q3TEG7|association_with_transcript=-7bp_to_ENSMUST00000100631_5end|description=CAGE_peak_2_at_Rab2b_5end|id=chr14:52899021..52899034,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.39e-17!71;UBERON:0003075!3.39e-17!71;UBERON:0007284!3.39e-17!71;UBERON:0004121!7.59e-16!102;UBERON:0000924!7.59e-16!102;UBERON:0006601!7.59e-16!102;UBERON:0000033!3.36e-12!63;UBERON:0000073!1.11e-11!75;UBERON:0001016!1.11e-11!75;UBERON:0003056!1.56e-11!49;UBERON:0001049!2.33e-11!52;UBERON:0005068!2.33e-11!52;UBERON:0006241!2.33e-11!52;UBERON:0007135!2.33e-11!52;UBERON:0001017!6.99e-11!73;UBERON:0005743!6.99e-11!73;UBERON:0000955!9.00e-11!50;UBERON:0006238!9.00e-11!50;UBERON:0002616!2.61e-10!49;UBERON:0007811!1.49e-09!86;UBERON:0000153!2.14e-09!94;UBERON:0003080!5.35e-09!40;UBERON:0002020!1.28e-08!34;UBERON:0002780!1.64e-08!39;UBERON:0001890!1.64e-08!39;UBERON:0006240!1.64e-08!39;UBERON:0002791!5.26e-08!29;UBERON:0003528!5.26e-08!29;UBERON:0001893!5.26e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.01e-17,92;UBERON:0002346,1.68e-16,64;UBERON:0003075,1.68e-16,64;UBERON:0007284,1.68e-16,64;UBERON:0003056,3.23e-14,49;UBERON:0010371,3.56e-14,73;UBERON:0004121,7.28e-14,95;UBERON:0000924,7.28e-14,95;UBERON:0006601,7.28e-14,95;UBERON:0000073,3.46e-13,54;UBERON:0001049,3.95e-13,52;UBERON:0005068,3.95e-13,52;UBERON:0006241,3.95e-13,52;UBERON:0007135,3.95e-13,52;UBERON:0001016,4.12e-13,75;UBERON:0000955,1.22e-12,47;UBERON:0006238,1.22e-12,47;UBERON:0001017,3.96e-12,73;UBERON:0002616,4.74e-12,46;UBERON:0003080,5.92e-11,40;UBERON:0002780,2.49e-10,39;UBERON:0001890,2.49e-10,39;UBERON:0006240,2.49e-10,39;UBERON:0002020,3.75e-10,34;UBERON:0003528,5.75e-10,29;UBERON:0002791,5.75e-10,29;UBERON:0001893,5.75e-10,29;UBERON:0000956,4.20e-07,21;UBERON:0001869,4.20e-07,21;UBERON:0000203,4.20e-07,21|phase1_expression=0.960893082628764,0,0,1.20985684522732,1.00179145989269,0.33575854382378,0.934450562382103,0.258246646883153,0.84473233291,1.87251621057595,1.02730780935303,1.19658238493005,0.342401459862411,0.786783621770977,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0,2.29616883407888,0.595745707205312,0.261199789138935,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,2.26614272356039,1.82478476195126,2.38610777810186,0.782391344348039,0.436050312760893,3.29529274101708,2.13872888981712,1.39986421625363,0,0.671130424230945,0,0.336093799142464,3.34437266846731,0.573066879877513,1.03134418455488,0.809265843438391,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,2.6996991518442,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,1.24427534770173,1.35005938331691,1.68259969081106,1.14260393761521,1.10434270475807,0.61245399607477,2.1086003624012,1.83843757322004,0,2.55374676170375,2.76491759861238,2.2420668914133,1.55528994124096,0.52091337055676,2.79182999001381,2.25105044012672,1.22238598221448,1.76777151284201,0.996601765593721,1.1183966749518,1.66597625333005,2.19157524309678,0.579728977403356,0,0,0,0,0,0.983110940922263,2.89731548382698,1.81850203222008,2.12003744706204,0.845060518660083,1.28326477414318,2.54805239706646,0,0.432982082022428,0,0,0.34255163915718,0.776813650941515,2.82040064223167,1.38788261412909,2.13125834818499,1.38369298353635,3.3158980921577,3.05730638552832,2.01066546127481,0.988779870937496,1.15679485535929,0.884610551949874,1.61766849947409,0.220841518460394,0.484875253135222,0,1.17112318804619,3.35114730901528,0.255457055208591,0.479260498023681,0,0.762421362438388,2.39665023047716,1.83000241127451,2.26177833803156,2.60736480288415,2.30143911597297,3.32460871295296,2.10913641988085,1.62942982160506,0.995255764880744,0,1.89397670297827,1.56144531555244,1.14951052216736,1.62055916824814,1.05493372485001,1.63287597963187,1.5373646434182,2.06143794031403,1.29351685369508,1.29340795759705,0.756424320671277,0.527853372491847,1.09597866213787,0.556094498451196,1.0447564995665,1.02891068203972,0.59710280045548,0,0,0,0.828503090142008,1.17263029990548,1.08037236876609,1.65721314909647,1.37734962223183,1.07986979021165,1.39520366850245,0.268273401399619,2.33530684734339,0.987359099480883,0.492502392237286,0.243206428637567,0.584799949701329,0.658650345873152,0.268412837520744,2.94405927989778,2.88132914661996,0.330418782983798,0.264450566663544,0.639864751605702,0.928946687441754,0.257734922644187,1.21010114774006,0.444756087689741,1.52180500890047,0,1.15289268306808,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.995706366271836,0.758671603812327,0.685491075658373,0,1.4255592949172,0.969762435838129,0.911765658574141,0.632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0.48235431950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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:76338
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3TEG7
|association_with_transcript=-7bp_to_ENSMUST00000100631_5end
|cluster_id=chr14:52899021..52899034,-
|description=CAGE_peak_2_at_Rab2b_5end
|id=chr14:52899021..52899034,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.39e-17!71;UBERON:0003075!3.39e-17!71;UBERON:0007284!3.39e-17!71;UBERON:0004121!7.59e-16!102;UBERON:0000924!7.59e-16!102;UBERON:0006601!7.59e-16!102;UBERON:0000033!3.36e-12!63;UBERON:0000073!1.11e-11!75;UBERON:0001016!1.11e-11!75;UBERON:0003056!1.56e-11!49;UBERON:0001049!2.33e-11!52;UBERON:0005068!2.33e-11!52;UBERON:0006241!2.33e-11!52;UBERON:0007135!2.33e-11!52;UBERON:0001017!6.99e-11!73;UBERON:0005743!6.99e-11!73;UBERON:0000955!9.00e-11!50;UBERON:0006238!9.00e-11!50;UBERON:0002616!2.61e-10!49;UBERON:0007811!1.49e-09!86;UBERON:0000153!2.14e-09!94;UBERON:0003080!5.35e-09!40;UBERON:0002020!1.28e-08!34;UBERON:0002780!1.64e-08!39;UBERON:0001890!1.64e-08!39;UBERON:0006240!1.64e-08!39;UBERON:0002791!5.26e-08!29;UBERON:0003528!5.26e-08!29;UBERON:0001893!5.26e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.01e-17,92;UBERON:0002346,1.68e-16,64;UBERON:0003075,1.68e-16,64;UBERON:0007284,1.68e-16,64;UBERON:0003056,3.23e-14,49;UBERON:0010371,3.56e-14,73;UBERON:0004121,7.28e-14,95;UBERON:0000924,7.28e-14,95;UBERON:0006601,7.28e-14,95;UBERON:0000073,3.46e-13,54;UBERON:0001049,3.95e-13,52;UBERON:0005068,3.95e-13,52;UBERON:0006241,3.95e-13,52;UBERON:0007135,3.95e-13,52;UBERON:0001016,4.12e-13,75;UBERON:0000955,1.22e-12,47;UBERON:0006238,1.22e-12,47;UBERON:0001017,3.96e-12,73;UBERON:0002616,4.74e-12,46;UBERON:0003080,5.92e-11,40;UBERON:0002780,2.49e-10,39;UBERON:0001890,2.49e-10,39;UBERON:0006240,2.49e-10,39;UBERON:0002020,3.75e-10,34;UBERON:0003528,5.75e-10,29;UBERON:0002791,5.75e-10,29;UBERON:0001893,5.75e-10,29;UBERON:0000956,4.20e-07,21;UBERON:0001869,4.20e-07,21;UBERON:0000203,4.20e-07,21
|phase1_expression=0.960893082628764,0,0,1.20985684522732,1.00179145989269,0.33575854382378,0.934450562382103,0.258246646883153,0.84473233291,1.87251621057595,1.02730780935303,1.19658238493005,0.342401459862411,0.786783621770977,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0,2.29616883407888,0.595745707205312,0.261199789138935,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,2.26614272356039,1.82478476195126,2.38610777810186,0.782391344348039,0.436050312760893,3.29529274101708,2.13872888981712,1.39986421625363,0,0.671130424230945,0,0.336093799142464,3.34437266846731,0.573066879877513,1.03134418455488,0.809265843438391,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,2.6996991518442,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,1.24427534770173,1.35005938331691,1.68259969081106,1.14260393761521,1.10434270475807,0.61245399607477,2.1086003624012,1.83843757322004,0,2.55374676170375,2.76491759861238,2.2420668914133,1.55528994124096,0.52091337055676,2.79182999001381,2.25105044012672,1.22238598221448,1.76777151284201,0.996601765593721,1.1183966749518,1.66597625333005,2.19157524309678,0.579728977403356,0,0,0,0,0,0.983110940922263,2.89731548382698,1.81850203222008,2.12003744706204,0.845060518660083,1.28326477414318,2.54805239706646,0,0.432982082022428,0,0,0.34255163915718,0.776813650941515,2.82040064223167,1.38788261412909,2.13125834818499,1.38369298353635,3.3158980921577,3.05730638552832,2.01066546127481,0.988779870937496,1.15679485535929,0.884610551949874,1.61766849947409,0.220841518460394,0.484875253135222,0,1.17112318804619,3.35114730901528,0.255457055208591,0.479260498023681,0,0.762421362438388,2.39665023047716,1.83000241127451,2.26177833803156,2.60736480288415,2.30143911597297,3.32460871295296,2.10913641988085,1.62942982160506,0.995255764880744,0,1.89397670297827,1.56144531555244,1.14951052216736,1.62055916824814,1.05493372485001,1.63287597963187,1.5373646434182,2.06143794031403,1.29351685369508,1.29340795759705,0.756424320671277,0.527853372491847,1.09597866213787,0.556094498451196,1.0447564995665,1.02891068203972,0.59710280045548,0,0,0,0.828503090142008,1.17263029990548,1.08037236876609,1.65721314909647,1.37734962223183,1.07986979021165,1.39520366850245,0.268273401399619,2.33530684734339,0.987359099480883,0.492502392237286,0.243206428637567,0.584799949701329,0.658650345873152,0.268412837520744,2.94405927989778,2.88132914661996,0.330418782983798,0.264450566663544,0.639864751605702,0.928946687441754,0.257734922644187,1.21010114774006,0.444756087689741,1.52180500890047,0,1.15289268306808,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.995706366271836,0.758671603812327,0.685491075658373,0,1.4255592949172,0.969762435838129,0.911765658574141,0.632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0.324270453550071,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,1.13694847062291,0.977789858652155,0.339490171550376,0.704070744865506,0.670025029767263,0.714130922658041,1.56106918286239,0.315270288212382,2.21464689648775,1.59454768657487,0.983179888294428,0.690739927463582,1.01254341007058,0,0.54390568381871,0.491764273019036,0.275936746304732,3.05046120976805,2.34423373184406,1.3114795630134,0.504941854408746,0.315508219416257,1.56175497718655,1.07711698866399,1.19484398976276,0.891194696329576,0.566153061577665,0.404810701674894,2.63030272120181,0.790575555893047,2.24924921495265,1.84522110770749,1.42452482933804,1.62886959353576,1.31976098378028,0,0.971122544619926,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0,0,0,0,2.7235168460303,0.720244376125241,1.29358683782755,0.214337035031592,1.41872186913819,0.891844088010353,1.31639216481697,0.304464949114599,0.469343416127421,0.42366414172764,0.220528398054962,0.98931751764888,1.61464426695906,1.08563264870681,1.07435109602823,0.164140899745061,0,3.33765543618917,0.341741761595705,1.03193433981611,0.555583582109135,0.941842285023455,0.683471138605126,0.228778173206523,0.679913719975421,0.839708713941948,0.690999869022119,0.954670618015114,0.949007980743406,0.406638934253697,1.29606408986162,1.04544148007234,0.87345025498471,0.809186078308924,1.23980183588004,0.785267825952089,0.518459893167171,0,1.69107881605257,1.34564891439581,0.827292452285488,0.777804753376191,0.904118764344118,0.844780627453891,1.40828686374905,1.0416350787516,0.943734099831398,1.20792060413003,1.72818003754719,0.948033361884535,1.41907650703115,0.924398614483445,0.389762468933385,0.895133478337407,0.39736270956253,0.360586348559907,0.295379054349154,0.807731599585181,0.685861259894999,0.201652370273681,0.877120926657772,0.673482891482306,0.701261413089414,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.563047426353546,0.73260649706906,0.214368379079066,0.501572104035363,3.95326289831947,4.14292712856459,1.14579102687879,1.54667864109319,2.05524755931193,1.5107877947794,0.675022500231806,0.45032120322422,1.35942722695261,0,1.14166082342594,1.59609949360412,1.02440163452481,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,1.13175804831646,1.49826411951812,0.832326981263301,1.32101578597911,0.952587382566147,0.811190281613988,0.77163688185482,1.64834360321323,0.883193520806384,2.05721551431249,0.887379030796687,1.43061713968393,0.872078499793971,1.59985946706062,0.930760686808441,0.73171189149109,2.36762740294059,0.679020569229309,0.561142271657738,0.593175090620871,1.0835493061312,0.818462086339379,1.23949472948773,1.35034627686799,0.749431733813838,1.63752125911786,1.07435527024149,1.14772999241306,0.441182838239031,1.15933917810211
|short_description=p2@Rab2b
}}

Revision as of 10:01, 4 August 2015

Short description:p2@Rab2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab2b_5end
Coexpression cluster:NA
Association with transcript: -7bp_to_ENSMUST00000100631_5end
EntrezGene:76338
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rab2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.01e-1792
neurectoderm1.68e-1664
neural plate1.68e-1664
presumptive neural plate1.68e-1664
pre-chordal neural plate3.23e-1449
ecto-epithelium3.56e-1473
ectoderm-derived structure7.28e-1495
ectoderm7.28e-1495
presumptive ectoderm7.28e-1495
regional part of nervous system3.46e-1354
neural tube3.95e-1352
neural rod3.95e-1352
future spinal cord3.95e-1352
neural keel3.95e-1352
nervous system4.12e-1375
brain1.22e-1247
future brain1.22e-1247
central nervous system3.96e-1273
regional part of brain4.74e-1246
anterior neural tube5.92e-1140
regional part of forebrain2.49e-1039
forebrain2.49e-1039
future forebrain2.49e-1039
gray matter3.75e-1034
brain grey matter5.75e-1029
regional part of telencephalon5.75e-1029
telencephalon5.75e-1029
cerebral cortex4.20e-0721
cerebral hemisphere4.20e-0721
pallium4.20e-0721
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