FFCP PHASE1:Mm9::chr14:65716868..65716937,-: Difference between revisions
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{{FFCP|EntrezGene=54616|HGNC=|MCL_coexpression_id=23|UniProt=Q6P1H4|association_with_transcript=5bp_to_ENSMUST00000022550,NM_018788,uc007uix.2_5end|description=CAGE_peak_1_at_Extl3_5end|id=chr14:65716868..65716937,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.51e-12!102;UBERON:0000924!3.51e-12!102;UBERON:0006601!3.51e-12!102;UBERON:0000033!2.08e-11!63;UBERON:0000955!2.23e-11!50;UBERON:0006238!2.23e-11!50;UBERON:0000073!3.72e-11!75;UBERON:0001016!3.72e-11!75;UBERON:0001049!5.00e-11!52;UBERON:0005068!5.00e-11!52;UBERON:0006241!5.00e-11!52;UBERON:0007135!5.00e-11!52;UBERON:0002616!7.29e-11!49;UBERON:0000025!1.69e-10!114;UBERON:0001017!1.94e-10!73;UBERON:0005743!1.94e-10!73;UBERON:0000468!2.79e-10!333;UBERON:0004111!3.27e-10!122;UBERON:0002346!3.95e-10!71;UBERON:0003075!3.95e-10!71;UBERON:0007284!3.95e-10!71;UBERON:0003056!1.29e-09!49;UBERON:0003080!3.57e-09!40;UBERON:0001264!5.73e-09!12;UBERON:0003922!5.73e-09!12;UBERON:0002114!5.73e-09!12;UBERON:0003923!5.73e-09!12;UBERON:0003924!5.73e-09!12;UBERON:0003921!5.73e-09!12;UBERON:0002780!8.21e-09!39;UBERON:0001890!8.21e-09!39;UBERON:0006240!8.21e-09!39;UBERON:0001045!2.85e-08!13;UBERON:0000922!4.04e-08!328;UBERON:0002020!5.94e-08!34;UBERON:0000923!1.17e-07!314;UBERON:0005291!1.17e-07!314;UBERON:0006598!1.17e-07!314;UBERON:0002532!1.17e-07!314;UBERON:0000475!1.63e-07!200;UBERON:0002791!2.60e-07!29;UBERON:0003528!2.60e-07!29;UBERON:0001893!2.60e-07!29;UBERON:0002021!3.29e-07!10;UBERON:0000411!3.29e-07!10;UBERON:0001950!3.29e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.37e-14,92;UBERON:0004121,3.00e-12,95;UBERON:0000924,3.00e-12,95;UBERON:0006601,3.00e-12,95;UBERON:0000073,1.33e-11,54;UBERON:0001016,3.72e-11,75;UBERON:0001049,5.00e-11,52;UBERON:0005068,5.00e-11,52;UBERON:0006241,5.00e-11,52;UBERON:0007135,5.00e-11,52;UBERON:0010371,1.01e-10,73;UBERON:0000955,1.42e-10,47;UBERON:0006238,1.42e-10,47;UBERON:0000025,1.69e-10,114;UBERON:0001017,1.94e-10,73;UBERON:0002346,2.17e-10,64;UBERON:0003075,2.17e-10,64;UBERON:0007284,2.17e-10,64;UBERON:0004111,3.27e-10,122;UBERON:0002616,4.56e-10,46;UBERON:0003056,1.29e-09,49;UBERON:0003080,3.57e-09,40;UBERON:0001264,5.73e-09,12;UBERON:0002780,8.21e-09,39;UBERON:0001890,8.21e-09,39;UBERON:0006240,8.21e-09,39;UBERON:0002020,5.94e-08,34;UBERON:0003528,2.60e-07,29;UBERON:0002791,2.60e-07,29;UBERON:0001893,2.60e-07,29;UBERON:0002021,3.29e-07,10;UBERON:0000411,3.29e-07,10;UBERON:0001950,3.29e-07,10|phase1_expression=24.6629224541383,6.2815573375085,4.54999239389536,6.0492842261366,9.01612313903425,7.21880869221126,4.90586545250604,15.7530454598723,22.2446180999633,24.8108397901313,30.9904522488164,30.9515976901905,22.0848941611255,21.6802597999114,7.66152452176024,8.30148596298286,11.1929900500503,16.2463015159492,17.9619908023518,9.33657233955666,16.7535281597607,0.992909512008853,0.783599367416806,7.99962113967033,8.25873411841812,2.8711598205751,6.8921919385452,5.817723282519,7.22088993934221,6.30075324399827,3.99114919179548,8.25539875497521,9.22597181376855,0,4.33277429626912,7.64679368649065,6.94175811292055,6.69650609179052,7.0320181007142,5.23523743973798,1.17646297606203,7.5135003345429,6.311634589405,31.8518949478211,30.5144562970739,29.367480345869,22.6893489860931,20.9304150125229,27.6804590245434,27.0257559713254,19.8780718708015,28.7505128729943,15.1004345451963,10.8804321301702,10.7550015725588,19.0371982666601,16.3324060765091,19.0798674142654,29.9428362072205,33.8554226734101,37.3960528068646,27.1075625655306,22.2323699027785,26.5470416598013,17.7995945262055,17.0515227587064,31.7576117149509,20.3635701820424,19.4936471139938,22.8160035780557,18.5085965989216,27.1368435183613,28.7129103237098,18.2511290830282,18.1147940224467,27.5765635983006,35.2370819198044,33.8371445925747,25.8058975870489,36.5325017012637,36.5035697973615,35.4221091978597,17.0301629390842,22.5105044012672,30.7124478031388,29.1682299618931,28.0472211174233,26.2823218613674,33.8496084199333,35.2163470097621,15.6526823898906,6.0229671388697,4.75979933595425,12.9528765993076,16.2444104361917,11.6486990645307,16.993774835942,21.9855116125695,15.5871602761721,16.2536204274756,19.7180787687353,15.3991772897181,5.09610479413291,7.11066703153331,6.71122227134764,11.4011939463794,6.0662933401774,13.5878816865681,18.3845897389492,37.4074190443358,23.2470337866622,18.8768596553528,23.522780720118,17.9359942257621,25.0463946199051,22.6199864393416,23.7307169024999,40.7770186514151,14.153768831198,20.0590893934787,16.1214308476087,17.9403843660032,20.5030937339934,31.3275452802355,37.4909605196085,22.480220858356,10.0644704584973,4.79922184794726,8.25956475974921,34.3020564237044,30.652540388848,28.6491922817331,56.4929040624898,60.8602788446187,40.7264567336738,41.2092808192104,32.6904357959515,18.661045591514,15.1633655060205,22.3068367239662,26.9349316932797,22.9902104433473,27.3694437304131,28.031096117443,24.62921269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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54616 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6P1H4 | |||
|association_with_transcript=5bp_to_ENSMUST00000022550,NM_018788,uc007uix.2_5end | |||
|cluster_id=chr14:65716868..65716937,- | |||
|description=CAGE_peak_1_at_Extl3_5end | |||
|id=chr14:65716868..65716937,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.51e-12!102;UBERON:0000924!3.51e-12!102;UBERON:0006601!3.51e-12!102;UBERON:0000033!2.08e-11!63;UBERON:0000955!2.23e-11!50;UBERON:0006238!2.23e-11!50;UBERON:0000073!3.72e-11!75;UBERON:0001016!3.72e-11!75;UBERON:0001049!5.00e-11!52;UBERON:0005068!5.00e-11!52;UBERON:0006241!5.00e-11!52;UBERON:0007135!5.00e-11!52;UBERON:0002616!7.29e-11!49;UBERON:0000025!1.69e-10!114;UBERON:0001017!1.94e-10!73;UBERON:0005743!1.94e-10!73;UBERON:0000468!2.79e-10!333;UBERON:0004111!3.27e-10!122;UBERON:0002346!3.95e-10!71;UBERON:0003075!3.95e-10!71;UBERON:0007284!3.95e-10!71;UBERON:0003056!1.29e-09!49;UBERON:0003080!3.57e-09!40;UBERON:0001264!5.73e-09!12;UBERON:0003922!5.73e-09!12;UBERON:0002114!5.73e-09!12;UBERON:0003923!5.73e-09!12;UBERON:0003924!5.73e-09!12;UBERON:0003921!5.73e-09!12;UBERON:0002780!8.21e-09!39;UBERON:0001890!8.21e-09!39;UBERON:0006240!8.21e-09!39;UBERON:0001045!2.85e-08!13;UBERON:0000922!4.04e-08!328;UBERON:0002020!5.94e-08!34;UBERON:0000923!1.17e-07!314;UBERON:0005291!1.17e-07!314;UBERON:0006598!1.17e-07!314;UBERON:0002532!1.17e-07!314;UBERON:0000475!1.63e-07!200;UBERON:0002791!2.60e-07!29;UBERON:0003528!2.60e-07!29;UBERON:0001893!2.60e-07!29;UBERON:0002021!3.29e-07!10;UBERON:0000411!3.29e-07!10;UBERON:0001950!3.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.37e-14,92;UBERON:0004121,3.00e-12,95;UBERON:0000924,3.00e-12,95;UBERON:0006601,3.00e-12,95;UBERON:0000073,1.33e-11,54;UBERON:0001016,3.72e-11,75;UBERON:0001049,5.00e-11,52;UBERON:0005068,5.00e-11,52;UBERON:0006241,5.00e-11,52;UBERON:0007135,5.00e-11,52;UBERON:0010371,1.01e-10,73;UBERON:0000955,1.42e-10,47;UBERON:0006238,1.42e-10,47;UBERON:0000025,1.69e-10,114;UBERON:0001017,1.94e-10,73;UBERON:0002346,2.17e-10,64;UBERON:0003075,2.17e-10,64;UBERON:0007284,2.17e-10,64;UBERON:0004111,3.27e-10,122;UBERON:0002616,4.56e-10,46;UBERON:0003056,1.29e-09,49;UBERON:0003080,3.57e-09,40;UBERON:0001264,5.73e-09,12;UBERON:0002780,8.21e-09,39;UBERON:0001890,8.21e-09,39;UBERON:0006240,8.21e-09,39;UBERON:0002020,5.94e-08,34;UBERON:0003528,2.60e-07,29;UBERON:0002791,2.60e-07,29;UBERON:0001893,2.60e-07,29;UBERON:0002021,3.29e-07,10;UBERON:0000411,3.29e-07,10;UBERON:0001950,3.29e-07,10 | |||
|phase1_expression=24.6629224541383,6.2815573375085,4.54999239389536,6.0492842261366,9.01612313903425,7.21880869221126,4.90586545250604,15.7530454598723,22.2446180999633,24.8108397901313,30.9904522488164,30.9515976901905,22.0848941611255,21.6802597999114,7.66152452176024,8.30148596298286,11.1929900500503,16.2463015159492,17.9619908023518,9.33657233955666,16.7535281597607,0.992909512008853,0.783599367416806,7.99962113967033,8.25873411841812,2.8711598205751,6.8921919385452,5.817723282519,7.22088993934221,6.30075324399827,3.99114919179548,8.25539875497521,9.22597181376855,0,4.33277429626912,7.64679368649065,6.94175811292055,6.69650609179052,7.0320181007142,5.23523743973798,1.17646297606203,7.5135003345429,6.311634589405,31.8518949478211,30.5144562970739,29.367480345869,22.6893489860931,20.9304150125229,27.6804590245434,27.0257559713254,19.8780718708015,28.7505128729943,15.1004345451963,10.8804321301702,10.7550015725588,19.0371982666601,16.3324060765091,19.0798674142654,29.9428362072205,33.8554226734101,37.3960528068646,27.1075625655306,22.2323699027785,26.5470416598013,17.7995945262055,17.0515227587064,31.7576117149509,20.3635701820424,19.4936471139938,22.8160035780557,18.5085965989216,27.1368435183613,28.7129103237098,18.2511290830282,18.1147940224467,27.5765635983006,35.2370819198044,33.8371445925747,25.8058975870489,36.5325017012637,36.5035697973615,35.4221091978597,17.0301629390842,22.5105044012672,30.7124478031388,29.1682299618931,28.0472211174233,26.2823218613674,33.8496084199333,35.2163470097621,15.6526823898906,6.0229671388697,4.75979933595425,12.9528765993076,16.2444104361917,11.6486990645307,16.993774835942,21.9855116125695,15.5871602761721,16.2536204274756,19.7180787687353,15.3991772897181,5.09610479413291,7.11066703153331,6.71122227134764,11.4011939463794,6.0662933401774,13.5878816865681,18.3845897389492,37.4074190443358,23.2470337866622,18.8768596553528,23.522780720118,17.9359942257621,25.0463946199051,22.6199864393416,23.7307169024999,40.7770186514151,14.153768831198,20.0590893934787,16.1214308476087,17.9403843660032,20.5030937339934,31.3275452802355,37.4909605196085,22.480220858356,10.0644704584973,4.79922184794726,8.25956475974921,34.3020564237044,30.652540388848,28.6491922817331,56.4929040624898,60.8602788446187,40.7264567336738,41.2092808192104,32.6904357959515,18.661045591514,15.1633655060205,22.3068367239662,26.9349316932797,22.9902104433473,27.3694437304131,28.031096117443,24.6292126927807,28.6974733438064,25.2994656311268,26.9051505568576,40.7423506643072,33.2826701095362,41.172563054364,31.1257940047156,28.0827721717854,23.6811473235073,24.6938563689532,26.4715574868596,4.91549231119264,4.88961023517959,5.11494298912067,34.3828782408933,36.1170132370888,32.7712951859047,45.9284787035308,42.1075455939444,34.247299060998,43.7163816130767,35.948635787549,33.745183944112,37.684205630187,34.6393349206891,32.1032485801589,31.8715972587224,32.2738669477844,25.7676324019914,38.2727706386712,34.5759497594396,13.8775888853195,12.6936271998501,30.073643325468,23.4559038579043,27.0621668776396,21.3784536100743,16.6783532883653,24.7293313946327,22.302865892592,17.9521860649172,23.3741744184251,22.8799942847323,21.8359777573415,15.2799299471218,13.6166971421057,18.1218558661474,31.6745394591646,27.6481400515544,25.9227792048085,22.4016460629846,22.4984885114446,26.0905249991985,29.6579359112767,25.5365556004712,22.7648155369993,19.1265604078791,18.0836102523161,12.8470731401392,13.562570662811,11.6928298440124,11.9687471619217,14.9529839046498,16.8053062175737,12.9463261852865,16.2135226775035,11.2570179407113,17.2521847832825,17.8627654880882,23.0907878104775,22.4795201372929,14.1723956682311,15.4381926836277,29.7452636168234,27.8552375302613,32.9189252412892,27.4987038955805,22.5302638356962,24.6234198439469,21.6619713206272,28.6846462350964,37.6747994413796,30.1191977922334,34.4422300300172,31.9533463695689,34.3643113913132,35.5836684110518,15.0791283939272,15.2293591469239,24.0964493779328,24.5583704211212,31.1468144576316,31.5299436933027,24.0984369703713,24.4896799388242,15.7754109708128,19.1314984705353,16.3721782276927,19.5954414321093,23.8394581268162,18.3999745012741,19.02610297872,16.9508397588561,15.0209355619679,44.0210203497876,37.7560626653995,30.8053494344352,33.0660527487759,43.3871423417768,248.233408695731,31.8042633363026,45.3485335447127,74.4990065035797,104.832171972674,95.3048958626175,60.9890771877002,85.4304264272138,101.95825021803,144.428798376668,166.561401548498,155.734670304762,18.3837387107046,29.7100805151662,31.0460841078611,28.7211626942334,24.8276327099183,26.7553226403106,29.4542746877797,26.7929155220847,15.0189893160775,18.0057260234247,17.421743446342,13.8504452470843,36.8138892866665,33.1117957855576,31.0368094408155,24.2928531622691,27.9821603164657,30.5951748317341,19.4792804109552,30.9580301944834,17.0378965180135,16.7647926734175,22.8279360294112,18.0734756833153,16.6578861393978,14.1350966846895,17.274996725553,21.0027535963325,34.006119309972,41.0705323596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| |||
|short_description=p1@Extl3 | |||
}} |
Revision as of 15:56, 4 August 2015
Short description: | p1@Extl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Extl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | 5bp_to_ENSMUST00000022550, NM_018788, uc007uix.2_5end |
EntrezGene: | 54616 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.37e-14 | 92 |
ectoderm-derived structure | 3.00e-12 | 95 |
ectoderm | 3.00e-12 | 95 |
presumptive ectoderm | 3.00e-12 | 95 |
regional part of nervous system | 1.33e-11 | 54 |
nervous system | 3.72e-11 | 75 |
neural tube | 5.00e-11 | 52 |
neural rod | 5.00e-11 | 52 |
future spinal cord | 5.00e-11 | 52 |
neural keel | 5.00e-11 | 52 |
ecto-epithelium | 1.01e-10 | 73 |
brain | 1.42e-10 | 47 |
future brain | 1.42e-10 | 47 |
tube | 1.69e-10 | 114 |
central nervous system | 1.94e-10 | 73 |
neurectoderm | 2.17e-10 | 64 |
neural plate | 2.17e-10 | 64 |
presumptive neural plate | 2.17e-10 | 64 |
anatomical conduit | 3.27e-10 | 122 |
regional part of brain | 4.56e-10 | 46 |
pre-chordal neural plate | 1.29e-09 | 49 |
anterior neural tube | 3.57e-09 | 40 |
pancreas | 5.73e-09 | 12 |
regional part of forebrain | 8.21e-09 | 39 |
forebrain | 8.21e-09 | 39 |
future forebrain | 8.21e-09 | 39 |
gray matter | 5.94e-08 | 34 |
brain grey matter | 2.60e-07 | 29 |
regional part of telencephalon | 2.60e-07 | 29 |
telencephalon | 2.60e-07 | 29 |
occipital lobe | 3.29e-07 | 10 |
visual cortex | 3.29e-07 | 10 |
neocortex | 3.29e-07 | 10 |