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FFCP PHASE1:Mm9::chr4:12098906..12098917,-: Difference between revisions

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{{FFCP|EntrezGene=68099|HGNC=|MCL_coexpression_id=2813|UniProt=|association_with_transcript=-25bp_to_ENSMUST00000152219_5end|description=CAGE_peak_4_at_Fam92a_5end|id=chr4:12098906..12098917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.08e-14!71;UBERON:0003075!1.08e-14!71;UBERON:0007284!1.08e-14!71;UBERON:0000033!2.13e-12!63;UBERON:0003056!3.56e-12!49;UBERON:0001049!4.72e-11!52;UBERON:0005068!4.72e-11!52;UBERON:0006241!4.72e-11!52;UBERON:0007135!4.72e-11!52;UBERON:0004121!7.27e-11!102;UBERON:0000924!7.27e-11!102;UBERON:0006601!7.27e-11!102;UBERON:0000073!1.33e-09!75;UBERON:0001016!1.33e-09!75;UBERON:0000955!1.49e-09!50;UBERON:0006238!1.49e-09!50;UBERON:0003080!2.23e-09!40;UBERON:0002616!3.77e-09!49;UBERON:0001017!4.21e-09!73;UBERON:0005743!4.21e-09!73;UBERON:0002780!6.17e-09!39;UBERON:0001890!6.17e-09!39;UBERON:0006240!6.17e-09!39;UBERON:0000025!3.57e-08!114;UBERON:0004111!4.41e-08!122;UBERON:0002020!5.36e-08!34;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.37e-18,92;UBERON:0002346,1.35e-15,64;UBERON:0003075,1.35e-15,64;UBERON:0007284,1.35e-15,64;UBERON:0010371,5.05e-14,73;UBERON:0003056,1.35e-12,49;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0004121,6.63e-11,95;UBERON:0000924,6.63e-11,95;UBERON:0006601,6.63e-11,95;UBERON:0000073,6.86e-11,54;UBERON:0001016,1.39e-10,75;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0001017,5.12e-10,73;UBERON:0002616,7.23e-10,46;UBERON:0003080,1.72e-09,40;UBERON:0002780,5.26e-09,39;UBERON:0001890,5.26e-09,39;UBERON:0006240,5.26e-09,39;UBERON:0000025,1.05e-08,114;UBERON:0002020,2.83e-08,34;UBERON:0004111,2.89e-08,122;UBERON:0003528,3.65e-07,29;UBERON:0002791,3.65e-07,29;UBERON:0001893,3.65e-07,29|phase1_expression=3.68342348341026,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,3.74190476664707,1.09220046320974,0.261199789138935,0.95995453676044,0.22940928106717,0.57423196411502,0,0.646413698057667,0.570070258369122,0,0,0,0.61506478758457,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0.7813353445238,0,0.588231488031014,0,0,2.01434908760924,1.01376931219515,1.65192076945513,0,0.65407546914134,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0.771778308107841,1.14613375975503,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,2.28117147078651,0.945041568321835,1.68259969081106,1.71390590642282,1.10434270475807,2.20483438586917,2.01275489138296,0.919218786610021,0,1.91531007127782,1.53606533256243,1.45074916503213,1.82975287204819,1.56274011167028,1.95428099300967,1.68828783009504,2.13917546887534,2.06240009831567,2.98980529678116,1.67759501242771,1.81742863999642,2.04043212288321,0.579728977403356,0,0,0.539703191637817,0,0,0.280888840263504,2.04516387093669,2.85764605063156,1.41335829804136,1.83096445709685,2.56652954828636,0,0,0.649473123033642,0.506719730950197,1.51657333504435,0.68510327831436,0,0.29688427812965,1.38788261412909,1.52232739156071,1.61430848079241,1.65794904607885,1.99900802130698,1.0053327306374,0.988779870937496,0.144599356919912,0,1.61766849947409,0.441683036920787,0.484875253135222,0,2.04946557908083,2.30391377494801,0,0.718890747035522,2.39961092397363,0.381210681219194,2.69623150928681,4.57500602818627,2.76439574648302,2.25971616249959,1.79000820131231,2.28566849015516,2.92034273521964,1.93494791315601,0.248813941220186,1.0108910337347,0.420883711772948,3.90361328888111,2.75882525320168,1.98068342785884,3.31550599238573,2.31324097114515,2.8185018462667,1.96773621575431,2.06962696591213,2.58681591519411,2.08016688184601,1.93546236580344,0.657587197282725,1.11218899690239,1.0447564995665,1.23469281844766,1.39323986772945,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,2.11073453982987,2.34080679899319,3.78791576936336,3.14822770795846,4.01094493507183,4.41814495025775,1.07309360559848,2.10177616260905,2.79751744852917,1.80584210487005,1.05389452409612,0.584799949701329,0.658650345873152,0.134206418760372,3.36463917702604,3.39585220851639,0,0.264450566663544,4.05247676016945,2.09013004674395,1.9330119198314,1.61346819698674,1.33426826306922,0.760902504450237,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.796565093017469,1.13800740571849,2.05647322697512,0,2.44381593414377,1.74557238450863,1.96380295692892,1.26473074248515,1.32849133181642,0.941992367048249,0.616985819609003,0.592905254174298,0.667380422864376,1.57247196090562,0.224862112384854,0,0.482354319504834,1.2731292589071,0,0.810676133875177,0.274561413188081,2.87536413054709,1.11642284300551,1.87222603868736,1.26289438973556,0.896987067609561,0.964887042726734,0.369506380333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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:68099
|HGNC=
|MCL_coexpression_id=2813
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-25bp_to_ENSMUST00000152219_5end
|cluster_id=chr4:12098906..12098917,-
|description=CAGE_peak_4_at_Fam92a_5end
|id=chr4:12098906..12098917,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.08e-14!71;UBERON:0003075!1.08e-14!71;UBERON:0007284!1.08e-14!71;UBERON:0000033!2.13e-12!63;UBERON:0003056!3.56e-12!49;UBERON:0001049!4.72e-11!52;UBERON:0005068!4.72e-11!52;UBERON:0006241!4.72e-11!52;UBERON:0007135!4.72e-11!52;UBERON:0004121!7.27e-11!102;UBERON:0000924!7.27e-11!102;UBERON:0006601!7.27e-11!102;UBERON:0000073!1.33e-09!75;UBERON:0001016!1.33e-09!75;UBERON:0000955!1.49e-09!50;UBERON:0006238!1.49e-09!50;UBERON:0003080!2.23e-09!40;UBERON:0002616!3.77e-09!49;UBERON:0001017!4.21e-09!73;UBERON:0005743!4.21e-09!73;UBERON:0002780!6.17e-09!39;UBERON:0001890!6.17e-09!39;UBERON:0006240!6.17e-09!39;UBERON:0000025!3.57e-08!114;UBERON:0004111!4.41e-08!122;UBERON:0002020!5.36e-08!34;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.37e-18,92;UBERON:0002346,1.35e-15,64;UBERON:0003075,1.35e-15,64;UBERON:0007284,1.35e-15,64;UBERON:0010371,5.05e-14,73;UBERON:0003056,1.35e-12,49;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0004121,6.63e-11,95;UBERON:0000924,6.63e-11,95;UBERON:0006601,6.63e-11,95;UBERON:0000073,6.86e-11,54;UBERON:0001016,1.39e-10,75;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0001017,5.12e-10,73;UBERON:0002616,7.23e-10,46;UBERON:0003080,1.72e-09,40;UBERON:0002780,5.26e-09,39;UBERON:0001890,5.26e-09,39;UBERON:0006240,5.26e-09,39;UBERON:0000025,1.05e-08,114;UBERON:0002020,2.83e-08,34;UBERON:0004111,2.89e-08,122;UBERON:0003528,3.65e-07,29;UBERON:0002791,3.65e-07,29;UBERON:0001893,3.65e-07,29
|phase1_expression=3.68342348341026,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,3.74190476664707,1.09220046320974,0.261199789138935,0.95995453676044,0.22940928106717,0.57423196411502,0,0.646413698057667,0.570070258369122,0,0,0,0.61506478758457,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0.7813353445238,0,0.588231488031014,0,0,2.01434908760924,1.01376931219515,1.65192076945513,0,0.65407546914134,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0.771778308107841,1.14613375975503,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,2.28117147078651,0.945041568321835,1.68259969081106,1.71390590642282,1.10434270475807,2.20483438586917,2.01275489138296,0.919218786610021,0,1.91531007127782,1.53606533256243,1.45074916503213,1.82975287204819,1.56274011167028,1.95428099300967,1.68828783009504,2.13917546887534,2.06240009831567,2.98980529678116,1.67759501242771,1.81742863999642,2.04043212288321,0.579728977403356,0,0,0.539703191637817,0,0,0.280888840263504,2.04516387093669,2.85764605063156,1.41335829804136,1.83096445709685,2.56652954828636,0,0,0.649473123033642,0.506719730950197,1.51657333504435,0.68510327831436,0,0.29688427812965,1.38788261412909,1.52232739156071,1.61430848079241,1.65794904607885,1.99900802130698,1.0053327306374,0.988779870937496,0.144599356919912,0,1.61766849947409,0.441683036920787,0.484875253135222,0,2.04946557908083,2.30391377494801,0,0.718890747035522,2.39961092397363,0.381210681219194,2.69623150928681,4.57500602818627,2.76439574648302,2.25971616249959,1.79000820131231,2.28566849015516,2.92034273521964,1.93494791315601,0.248813941220186,1.0108910337347,0.420883711772948,3.90361328888111,2.75882525320168,1.98068342785884,3.31550599238573,2.31324097114515,2.8185018462667,1.96773621575431,2.06962696591213,2.58681591519411,2.08016688184601,1.93546236580344,0.657587197282725,1.11218899690239,1.0447564995665,1.23469281844766,1.39323986772945,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,2.11073453982987,2.34080679899319,3.78791576936336,3.14822770795846,4.01094493507183,4.41814495025775,1.07309360559848,2.10177616260905,2.79751744852917,1.80584210487005,1.05389452409612,0.584799949701329,0.658650345873152,0.134206418760372,3.36463917702604,3.39585220851639,0,0.264450566663544,4.05247676016945,2.09013004674395,1.9330119198314,1.61346819698674,1.33426826306922,0.760902504450237,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.796565093017469,1.13800740571849,2.05647322697512,0,2.44381593414377,1.74557238450863,1.96380295692892,1.26473074248515,1.32849133181642,0.941992367048249,0.616985819609003,0.592905254174298,0.667380422864376,1.57247196090562,0.224862112384854,0,0.482354319504834,1.2731292589071,0,0.810676133875177,0.274561413188081,2.87536413054709,1.11642284300551,1.87222603868736,1.26289438973556,0.896987067609561,0.964887042726734,0.369506380333209,2.65287976478679,3.25929952884052,2.20668611507745,2.58159273117352,2.34508760418542,0.714130922658041,0.390267295715598,1.57635144106191,1.55025282754142,1.91345722388985,0.655453258862952,1.55416483679306,0.144649058581512,0,0,0,0.551873492609465,1.9266070798535,2.69586879162067,3.60656879828686,0.504941854408746,1.26203287766503,3.51394869866975,1.72338718186239,1.67278158566786,2.00518806674155,1.69845918473299,2.42886421004937,0.876767573733936,0.790575555893047,2.57057053137446,1.84522110770749,0.534196811001766,1.62886959353576,0.659880491890142,0,1.45668381692989,1.51161778482376,1.13163047853539,0.295301892880773,0.614870295887855,2.06742634534577,1.45413491791002,1.78248689192361,1.26414703174326,0,2.06271086496374,2.38307724027652,3.06103859853227,1.29358683782755,1.71469628025274,1.06404140185364,1.42695054081656,2.46823530903181,0.913394847343798,0.938686832254841,0,0.441056796109924,0.65954501176592,1.93757312035087,1.32688434841943,0.358117032009409,0.820704498725306,0,2.59595422814714,0.170870880797853,1.03193433981611,0.740778109478847,0.188368457004691,0.27338845544205,0,0.679913719975421,0.839708713941948,0.967399816630967,0.954670618015114,2.05618395827738,2.64315307264903,0.972048067396211,1.04544148007234,1.52853794622324,0.944050424693745,0.909188012978695,1.04702376793612,0.388844919875379,0.621339313086926,20.2929457926309,1.64468200648377,1.65458490457098,1.36115831840833,1.80823752868824,1.18269287843545,2.93393096614385,2.73429208172295,0.629156066554265,4.83168241652012,8.64090018773596,0.632022241256357,0.810900861160657,0.513554785824136,0.909445760844565,0.895133478337407,0.79472541912506,0.120195449519969,0.443068581523732,0.908698049533329,0.838274873204998,0.604957110821043,0.487289403698762,0.192423683280659,0.467507608726276,0.680191150845634,1.10992976687032,1.79427713218951,1.67884616364078,0.772758376128762,0.750729901804728,1.28206136987086,1.2862102744744,1.00314420807073,1.6942555278512,3.68260189205742,1.71868654031819,1.20297227640581,2.74033007908257,3.0215755895588,2.02506750069542,2.70192721934532,2.71885445390523,1.55328093525546,2.28332164685189,0.798049746802062,2.90247129782028,2.43106717068294,1.25767897576789,1.10306105070008,0.888986911206461,1.64828045791115,0.962757628775446,1.76888048234658,1.01391719956096,0.943131706930381,1.40462261204824,0.960377286073039,1.32101578597911,0.476293691283074,1.39061191133827,1.35036454324594,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,1.43061713968393,0.872078499793971,0.941093804153306,1.18460451048347,0.73171189149109,1.57841826862706,1.49384525230448,1.12228454331548,0.711810108745045,1.28055827088233,0,1.23949472948773,1.54325288784913,0.499621155875892,0.935726433781634,1.07435527024149,1.3390183244819,0.661774257358546,1.62307484934295
|short_description=p4@Fam92a
}}

Revision as of 16:50, 4 August 2015

Short description:p4@Fam92a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Fam92a_5end
Coexpression cluster:MCL_coexpression_mm9:2813
Association with transcript: -25bp_to_ENSMUST00000152219_5end
EntrezGene:68099
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p4@Fam92a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G520.29
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.37e-1892
neurectoderm1.35e-1564
neural plate1.35e-1564
presumptive neural plate1.35e-1564
ecto-epithelium5.05e-1473
pre-chordal neural plate1.35e-1249
neural tube1.55e-1152
neural rod1.55e-1152
future spinal cord1.55e-1152
neural keel1.55e-1152
ectoderm-derived structure6.63e-1195
ectoderm6.63e-1195
presumptive ectoderm6.63e-1195
regional part of nervous system6.86e-1154
nervous system1.39e-1075
brain2.52e-1047
future brain2.52e-1047
central nervous system5.12e-1073
regional part of brain7.23e-1046
anterior neural tube1.72e-0940
regional part of forebrain5.26e-0939
forebrain5.26e-0939
future forebrain5.26e-0939
tube1.05e-08114
gray matter2.83e-0834
anatomical conduit2.89e-08122
brain grey matter3.65e-0729
regional part of telencephalon3.65e-0729
telencephalon3.65e-0729