FFCP PHASE1:Mm9::chr4:12098906..12098917,-: Difference between revisions
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{{FFCP|EntrezGene=68099|HGNC=|MCL_coexpression_id=2813|UniProt=|association_with_transcript=-25bp_to_ENSMUST00000152219_5end|description=CAGE_peak_4_at_Fam92a_5end|id=chr4:12098906..12098917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.08e-14!71;UBERON:0003075!1.08e-14!71;UBERON:0007284!1.08e-14!71;UBERON:0000033!2.13e-12!63;UBERON:0003056!3.56e-12!49;UBERON:0001049!4.72e-11!52;UBERON:0005068!4.72e-11!52;UBERON:0006241!4.72e-11!52;UBERON:0007135!4.72e-11!52;UBERON:0004121!7.27e-11!102;UBERON:0000924!7.27e-11!102;UBERON:0006601!7.27e-11!102;UBERON:0000073!1.33e-09!75;UBERON:0001016!1.33e-09!75;UBERON:0000955!1.49e-09!50;UBERON:0006238!1.49e-09!50;UBERON:0003080!2.23e-09!40;UBERON:0002616!3.77e-09!49;UBERON:0001017!4.21e-09!73;UBERON:0005743!4.21e-09!73;UBERON:0002780!6.17e-09!39;UBERON:0001890!6.17e-09!39;UBERON:0006240!6.17e-09!39;UBERON:0000025!3.57e-08!114;UBERON:0004111!4.41e-08!122;UBERON:0002020!5.36e-08!34;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.37e-18,92;UBERON:0002346,1.35e-15,64;UBERON:0003075,1.35e-15,64;UBERON:0007284,1.35e-15,64;UBERON:0010371,5.05e-14,73;UBERON:0003056,1.35e-12,49;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0004121,6.63e-11,95;UBERON:0000924,6.63e-11,95;UBERON:0006601,6.63e-11,95;UBERON:0000073,6.86e-11,54;UBERON:0001016,1.39e-10,75;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0001017,5.12e-10,73;UBERON:0002616,7.23e-10,46;UBERON:0003080,1.72e-09,40;UBERON:0002780,5.26e-09,39;UBERON:0001890,5.26e-09,39;UBERON:0006240,5.26e-09,39;UBERON:0000025,1.05e-08,114;UBERON:0002020,2.83e-08,34;UBERON:0004111,2.89e-08,122;UBERON:0003528,3.65e-07,29;UBERON:0002791,3.65e-07,29;UBERON:0001893,3.65e-07,29|phase1_expression=3.68342348341026,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,3.74190476664707,1.09220046320974,0.261199789138935,0.95995453676044,0.22940928106717,0.57423196411502,0,0.646413698057667,0.570070258369122,0,0,0,0.61506478758457,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0.7813353445238,0,0.588231488031014,0,0,2.01434908760924,1.01376931219515,1.65192076945513,0,0.65407546914134,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0.771778308107841,1.14613375975503,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,2.28117147078651,0.945041568321835,1.68259969081106,1.71390590642282,1.10434270475807,2.20483438586917,2.01275489138296,0.919218786610021,0,1.91531007127782,1.53606533256243,1.45074916503213,1.82975287204819,1.56274011167028,1.95428099300967,1.68828783009504,2.13917546887534,2.06240009831567,2.98980529678116,1.67759501242771,1.81742863999642,2.04043212288321,0.579728977403356,0,0,0.539703191637817,0,0,0.280888840263504,2.04516387093669,2.85764605063156,1.41335829804136,1.83096445709685,2.56652954828636,0,0,0.649473123033642,0.506719730950197,1.51657333504435,0.68510327831436,0,0.29688427812965,1.38788261412909,1.52232739156071,1.61430848079241,1.65794904607885,1.99900802130698,1.0053327306374,0.988779870937496,0.144599356919912,0,1.61766849947409,0.441683036920787,0.484875253135222,0,2.04946557908083,2.30391377494801,0,0.718890747035522,2.39961092397363,0.381210681219194,2.69623150928681,4.57500602818627,2.76439574648302,2.25971616249959,1.79000820131231,2.28566849015516,2.92034273521964,1.93494791315601,0.248813941220186,1.0108910337347,0.420883711772948,3.90361328888111,2.75882525320168,1.98068342785884,3.31550599238573,2.31324097114515,2.8185018462667,1.96773621575431,2.06962696591213,2.58681591519411,2.08016688184601,1.93546236580344,0.657587197282725,1.11218899690239,1.0447564995665,1.23469281844766,1.39323986772945,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,2.11073453982987,2.34080679899319,3.78791576936336,3.14822770795846,4.01094493507183,4.41814495025775,1.07309360559848,2.10177616260905,2.79751744852917,1.80584210487005,1.05389452409612,0.584799949701329,0.658650345873152,0.134206418760372,3.36463917702604,3.39585220851639,0,0.264450566663544,4.05247676016945,2.09013004674395,1.9330119198314,1.61346819698674,1.33426826306922,0.760902504450237,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.796565093017469,1.13800740571849,2.05647322697512,0,2.44381593414377,1.74557238450863,1.96380295692892,1.26473074248515,1.32849133181642,0.941992367048249,0.616985819609003,0.592905254174298,0.667380422864376,1.57247196090562,0.224862112384854,0,0.482354319504834,1.2731292589071,0,0.810676133875177,0.274561413188081,2.87536413054709,1.11642284300551,1.87222603868736,1.26289438973556,0.896987067609561,0.964887042726734,0.369506380333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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68099 | |||
|HGNC= | |||
|MCL_coexpression_id=2813 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENSMUST00000152219_5end | |||
|cluster_id=chr4:12098906..12098917,- | |||
|description=CAGE_peak_4_at_Fam92a_5end | |||
|id=chr4:12098906..12098917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.08e-14!71;UBERON:0003075!1.08e-14!71;UBERON:0007284!1.08e-14!71;UBERON:0000033!2.13e-12!63;UBERON:0003056!3.56e-12!49;UBERON:0001049!4.72e-11!52;UBERON:0005068!4.72e-11!52;UBERON:0006241!4.72e-11!52;UBERON:0007135!4.72e-11!52;UBERON:0004121!7.27e-11!102;UBERON:0000924!7.27e-11!102;UBERON:0006601!7.27e-11!102;UBERON:0000073!1.33e-09!75;UBERON:0001016!1.33e-09!75;UBERON:0000955!1.49e-09!50;UBERON:0006238!1.49e-09!50;UBERON:0003080!2.23e-09!40;UBERON:0002616!3.77e-09!49;UBERON:0001017!4.21e-09!73;UBERON:0005743!4.21e-09!73;UBERON:0002780!6.17e-09!39;UBERON:0001890!6.17e-09!39;UBERON:0006240!6.17e-09!39;UBERON:0000025!3.57e-08!114;UBERON:0004111!4.41e-08!122;UBERON:0002020!5.36e-08!34;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.37e-18,92;UBERON:0002346,1.35e-15,64;UBERON:0003075,1.35e-15,64;UBERON:0007284,1.35e-15,64;UBERON:0010371,5.05e-14,73;UBERON:0003056,1.35e-12,49;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0004121,6.63e-11,95;UBERON:0000924,6.63e-11,95;UBERON:0006601,6.63e-11,95;UBERON:0000073,6.86e-11,54;UBERON:0001016,1.39e-10,75;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0001017,5.12e-10,73;UBERON:0002616,7.23e-10,46;UBERON:0003080,1.72e-09,40;UBERON:0002780,5.26e-09,39;UBERON:0001890,5.26e-09,39;UBERON:0006240,5.26e-09,39;UBERON:0000025,1.05e-08,114;UBERON:0002020,2.83e-08,34;UBERON:0004111,2.89e-08,122;UBERON:0003528,3.65e-07,29;UBERON:0002791,3.65e-07,29;UBERON:0001893,3.65e-07,29 | |||
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| |||
|short_description=p4@Fam92a | |||
}} |
Revision as of 16:50, 4 August 2015
Short description: | p4@Fam92a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam92a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2813 |
Association with transcript: | -25bp_to_ENSMUST00000152219_5end |
EntrezGene: | 68099 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.37e-18 | 92 |
neurectoderm | 1.35e-15 | 64 |
neural plate | 1.35e-15 | 64 |
presumptive neural plate | 1.35e-15 | 64 |
ecto-epithelium | 5.05e-14 | 73 |
pre-chordal neural plate | 1.35e-12 | 49 |
neural tube | 1.55e-11 | 52 |
neural rod | 1.55e-11 | 52 |
future spinal cord | 1.55e-11 | 52 |
neural keel | 1.55e-11 | 52 |
ectoderm-derived structure | 6.63e-11 | 95 |
ectoderm | 6.63e-11 | 95 |
presumptive ectoderm | 6.63e-11 | 95 |
regional part of nervous system | 6.86e-11 | 54 |
nervous system | 1.39e-10 | 75 |
brain | 2.52e-10 | 47 |
future brain | 2.52e-10 | 47 |
central nervous system | 5.12e-10 | 73 |
regional part of brain | 7.23e-10 | 46 |
anterior neural tube | 1.72e-09 | 40 |
regional part of forebrain | 5.26e-09 | 39 |
forebrain | 5.26e-09 | 39 |
future forebrain | 5.26e-09 | 39 |
tube | 1.05e-08 | 114 |
gray matter | 2.83e-08 | 34 |
anatomical conduit | 2.89e-08 | 122 |
brain grey matter | 3.65e-07 | 29 |
regional part of telencephalon | 3.65e-07 | 29 |
telencephalon | 3.65e-07 | 29 |