FFCP PHASE1:Mm9::chr12:25516448..25516523,+: Difference between revisions
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{{FFCP|EntrezGene=67216|HGNC=|MCL_coexpression_id=28|UniProt=Q8R3I2,Q8BN01|association_with_transcript=0bp_to_ENSMUST00000078902,ENSMUST00000110942,NM_001083341,NM_026037,uc007net.1,uc007neu.1,uc007nev.1,uc007new.1,uc007nex.1_5end|description=CAGE_peak_1_at_Mboat2_5end|id=chr12:25516448..25516523,+|ontology_enrichment_celltype=CL:0000540!3.26e-12!33;CL:0000047!3.26e-12!33;CL:0000031!3.26e-12!33;CL:0000404!3.26e-12!33;CL:0000221!1.41e-10!44;CL:0000133!1.41e-10!44;CL:0002319!5.07e-10!43;CL:0000117!5.93e-09!23;CL:0000337!5.93e-09!23;CL:0000393!3.15e-08!39;CL:0000211!3.15e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.01e-12,33;CL:0000047,3.01e-12,33;CL:0000031,3.01e-12,33;CL:0000404,3.01e-12,33;CL:0000221,1.32e-10,44;CL:0000133,1.32e-10,44;CL:0002319,4.76e-10,43;CL:0000117,5.61e-09,23;CL:0000337,5.61e-09,23;CL:0000393,4.05e-08,39;CL:0000211,4.05e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.57e-21!102;UBERON:0000924!8.57e-21!102;UBERON:0006601!8.57e-21!102;UBERON:0000073!1.85e-18!75;UBERON:0001016!1.85e-18!75;UBERON:0001017!6.50e-18!73;UBERON:0005743!6.50e-18!73;UBERON:0000033!2.46e-14!63;UBERON:0002346!3.59e-14!71;UBERON:0003075!3.59e-14!71;UBERON:0007284!3.59e-14!71;UBERON:0001049!2.86e-12!52;UBERON:0005068!2.86e-12!52;UBERON:0006241!2.86e-12!52;UBERON:0007135!2.86e-12!52;UBERON:0003056!6.36e-12!49;UBERON:0000955!2.25e-11!50;UBERON:0006238!2.25e-11!50;UBERON:0002616!6.53e-11!49;UBERON:0002020!2.49e-10!34;UBERON:0000468!1.10e-09!333;UBERON:0003080!4.76e-09!40;UBERON:0002780!1.43e-08!39;UBERON:0001890!1.43e-08!39;UBERON:0006240!1.43e-08!39;UBERON:0002791!3.96e-08!29;UBERON:0003528!3.96e-08!29;UBERON:0001893!3.96e-08!29;UBERON:0000922!6.26e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.27e-22,95;UBERON:0000924,1.27e-22,95;UBERON:0006601,1.27e-22,95;UBERON:0001016,1.63e-18,75;UBERON:0010371,2.37e-18,73;UBERON:0001017,5.75e-18,73;UBERON:0002346,4.97e-16,64;UBERON:0003075,4.97e-16,64;UBERON:0007284,4.97e-16,64;UBERON:0000073,3.46e-13,54;UBERON:0010314,1.38e-12,92;UBERON:0001049,2.64e-12,52;UBERON:0005068,2.64e-12,52;UBERON:0006241,2.64e-12,52;UBERON:0007135,2.64e-12,52;UBERON:0003056,5.89e-12,49;UBERON:0002020,2.33e-10,34;UBERON:0000955,4.94e-10,47;UBERON:0006238,4.94e-10,47;UBERON:0002616,1.39e-09,46;UBERON:0003080,4.50e-09,40;UBERON:0000922,1.21e-08,320;UBERON:0002780,1.36e-08,39;UBERON:0001890,1.36e-08,39;UBERON:0006240,1.36e-08,39;UBERON:0003528,3.77e-08,29;UBERON:0002791,3.77e-08,29;UBERON:0001893,3.77e-08,29|phase1_expression=36.1936394456834,1.04692622291808,0.909998478779072,0.60492842261366,0,2.35030980676646,2.56973904655078,1.67860320474049,1.83025338797167,2.80877431586392,0.34243593645101,0.0797721589953364,0,0.174840804837995,27.6481102307,26.5242600280672,30.7807226376385,0.788655413395594,0.822686601634433,1.27316895539409,14.8825757764372,0.595745707205312,0,0.47997726838022,0.45881856213434,0,1.29228598847722,1.07735616342945,1.14014051673824,0,2.21730510655305,4.44521471421742,5.53558308826113,15.8481681015439,0.288851619751275,0,0.204169356262369,0.837063261473815,0,0,0,0,0.971020706062307,0.881277725829041,0.405507724878058,1.28482726513177,1.56478268869608,19.6222640742402,15.378032791413,17.4986909166855,10.7789544651529,18.6878333674463,0,0.725362142011344,0,5.65970759279083,3.15186783932632,5.67239301505187,31.5613678940973,34.3844136526821,41.1990412279016,5.76035704517525,1.77858959222228,0,0.988866362566974,0.7104801149461,10.1864037576258,11.1423308543251,24.9891965663431,27.1361936046698,24.3976955167603,35.4207220660716,41.5232856989033,33.1950065872525,24.9198224647415,41.3648453974509,53.9567816897005,35.1140179734266,42.0881901122107,29.1468695883728,28.1781942295422,30.7338888628488,32.943593882163,39.3933827022176,37.5883689530953,48.0244594322078,42.2843891973336,35.0430958151565,23.9294770932862,35.2163470097621,3.18850937571846,1.72084775396277,1.3599426674155,0,0,0.448026887097336,17.8364413567325,0,0,0,62.6753218006228,0,0,0,1.08245520505607,1.52015919285059,0.505524445014783,5.82337786567206,1.03575153458869,15.4379824627418,11.450031566565,12.1786191324856,14.0675453326196,13.4143150091834,16.4624189989987,7.91699525376955,7.91023896749996,1.59059292611903,15.9229899350977,12.1325137460557,14.3546986999256,15.0311328471919,26.0948465705371,24.0080253549469,25.3430515244281,0.510914110417183,0.239630249011841,0.599902730993408,0.127070227073065,45.9857262972806,21.9600289352941,33.6753663662477,32.3313235557634,35.8001640262463,33.0382990849701,36.3420429271777,14.0538322113436,18.9098595327341,51.0499972036023,320.082062803327,27.0650521362424,30.5769798896519,28.0896922496345,37.8269092767645,30.6844611172489,26.6476538192488,25.9553777030449,113.312076383689,21.3412313003514,31.5807153880258,33.9585669636421,27.3994665534469,70.6240013033019,128.505049446679,139.10872421177,25.4763861527671,0,0,0.284163499395593,20.0911999359437,25.3288144779584,19.2666405763286,18.7028341112316,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67216 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R3I2,uniprot:Q8BN01 | |||
|association_with_transcript=0bp_to_ENSMUST00000078902,ENSMUST00000110942,NM_001083341,NM_026037,uc007net.1,uc007neu.1,uc007nev.1,uc007new.1,uc007nex.1_5end | |||
|cluster_id=chr12:25516448..25516523,+ | |||
|description=CAGE_peak_1_at_Mboat2_5end | |||
|id=chr12:25516448..25516523,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.26e-12!33;CL:0000047!3.26e-12!33;CL:0000031!3.26e-12!33;CL:0000404!3.26e-12!33;CL:0000221!1.41e-10!44;CL:0000133!1.41e-10!44;CL:0002319!5.07e-10!43;CL:0000117!5.93e-09!23;CL:0000337!5.93e-09!23;CL:0000393!3.15e-08!39;CL:0000211!3.15e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.01e-12,33;CL:0000047,3.01e-12,33;CL:0000031,3.01e-12,33;CL:0000404,3.01e-12,33;CL:0000221,1.32e-10,44;CL:0000133,1.32e-10,44;CL:0002319,4.76e-10,43;CL:0000117,5.61e-09,23;CL:0000337,5.61e-09,23;CL:0000393,4.05e-08,39;CL:0000211,4.05e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.57e-21!102;UBERON:0000924!8.57e-21!102;UBERON:0006601!8.57e-21!102;UBERON:0000073!1.85e-18!75;UBERON:0001016!1.85e-18!75;UBERON:0001017!6.50e-18!73;UBERON:0005743!6.50e-18!73;UBERON:0000033!2.46e-14!63;UBERON:0002346!3.59e-14!71;UBERON:0003075!3.59e-14!71;UBERON:0007284!3.59e-14!71;UBERON:0001049!2.86e-12!52;UBERON:0005068!2.86e-12!52;UBERON:0006241!2.86e-12!52;UBERON:0007135!2.86e-12!52;UBERON:0003056!6.36e-12!49;UBERON:0000955!2.25e-11!50;UBERON:0006238!2.25e-11!50;UBERON:0002616!6.53e-11!49;UBERON:0002020!2.49e-10!34;UBERON:0000468!1.10e-09!333;UBERON:0003080!4.76e-09!40;UBERON:0002780!1.43e-08!39;UBERON:0001890!1.43e-08!39;UBERON:0006240!1.43e-08!39;UBERON:0002791!3.96e-08!29;UBERON:0003528!3.96e-08!29;UBERON:0001893!3.96e-08!29;UBERON:0000922!6.26e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.27e-22,95;UBERON:0000924,1.27e-22,95;UBERON:0006601,1.27e-22,95;UBERON:0001016,1.63e-18,75;UBERON:0010371,2.37e-18,73;UBERON:0001017,5.75e-18,73;UBERON:0002346,4.97e-16,64;UBERON:0003075,4.97e-16,64;UBERON:0007284,4.97e-16,64;UBERON:0000073,3.46e-13,54;UBERON:0010314,1.38e-12,92;UBERON:0001049,2.64e-12,52;UBERON:0005068,2.64e-12,52;UBERON:0006241,2.64e-12,52;UBERON:0007135,2.64e-12,52;UBERON:0003056,5.89e-12,49;UBERON:0002020,2.33e-10,34;UBERON:0000955,4.94e-10,47;UBERON:0006238,4.94e-10,47;UBERON:0002616,1.39e-09,46;UBERON:0003080,4.50e-09,40;UBERON:0000922,1.21e-08,320;UBERON:0002780,1.36e-08,39;UBERON:0001890,1.36e-08,39;UBERON:0006240,1.36e-08,39;UBERON:0003528,3.77e-08,29;UBERON:0002791,3.77e-08,29;UBERON:0001893,3.77e-08,29 | |||
|phase1_expression=36.1936394456834,1.04692622291808,0.909998478779072,0.60492842261366,0,2.35030980676646,2.56973904655078,1.67860320474049,1.83025338797167,2.80877431586392,0.34243593645101,0.0797721589953364,0,0.174840804837995,27.6481102307,26.5242600280672,30.7807226376385,0.788655413395594,0.822686601634433,1.27316895539409,14.8825757764372,0.595745707205312,0,0.47997726838022,0.45881856213434,0,1.29228598847722,1.07735616342945,1.14014051673824,0,2.21730510655305,4.44521471421742,5.53558308826113,15.8481681015439,0.288851619751275,0,0.204169356262369,0.837063261473815,0,0,0,0,0.971020706062307,0.881277725829041,0.405507724878058,1.28482726513177,1.56478268869608,19.6222640742402,15.378032791413,17.4986909166855,10.7789544651529,18.6878333674463,0,0.725362142011344,0,5.65970759279083,3.15186783932632,5.67239301505187,31.5613678940973,34.3844136526821,41.1990412279016,5.76035704517525,1.77858959222228,0,0.988866362566974,0.7104801149461,10.1864037576258,11.1423308543251,24.9891965663431,27.1361936046698,24.3976955167603,35.4207220660716,41.5232856989033,33.1950065872525,24.9198224647415,41.3648453974509,53.9567816897005,35.1140179734266,42.0881901122107,29.1468695883728,28.1781942295422,30.7338888628488,32.943593882163,39.3933827022176,37.5883689530953,48.0244594322078,42.2843891973336,35.0430958151565,23.9294770932862,35.2163470097621,3.18850937571846,1.72084775396277,1.3599426674155,0,0,0.448026887097336,17.8364413567325,0,0,0,62.6753218006228,0,0,0,1.08245520505607,1.52015919285059,0.505524445014783,5.82337786567206,1.03575153458869,15.4379824627418,11.450031566565,12.1786191324856,14.0675453326196,13.4143150091834,16.4624189989987,7.91699525376955,7.91023896749996,1.59059292611903,15.9229899350977,12.1325137460557,14.3546986999256,15.0311328471919,26.0948465705371,24.0080253549469,25.3430515244281,0.510914110417183,0.239630249011841,0.599902730993408,0.127070227073065,45.9857262972806,21.9600289352941,33.6753663662477,32.3313235557634,35.8001640262463,33.0382990849701,36.3420429271777,14.0538322113436,18.9098595327341,51.0499972036023,320.082062803327,27.0650521362424,30.5769798896519,28.0896922496345,37.8269092767645,30.6844611172489,26.6476538192488,25.9553777030449,113.312076383689,21.3412313003514,31.5807153880258,33.9585669636421,27.3994665534469,70.6240013033019,128.505049446679,139.10872421177,25.4763861527671,0,0,0.284163499395593,20.0911999359437,25.3288144779584,19.2666405763286,18.7028341112316,16.3314312350345,18.8205877722601,23.4859284197912,24.1446061259657,19.8501082024188,16.9496645410885,13.6258995185649,11.5928397650574,12.2807989437279,7.46470391989572,7.64976586934119,32.1743621303115,40.2357034403002,0,1.58670339998127,25.3813018136928,22.9914305141834,12.6290112095651,11.6976444281539,7.11609740303585,10.4624094361908,2.37264530772256,8.07024878147653,8.29406189040889,9.15199771389294,4.874102177978,2.69645822596266,3.8904848977445,2.58883655230677,15.9321036800589,18.8510045806053,14.6520056375005,19.5505274731502,23.2742984601151,25.8801175395276,25.9269802209455,18.1560482014911,15.6998727841375,14.9310568345379,0,7.50802975722423,4.12773889737726,2.9232074610031,5.07150303471257,5.30589751455317,5.0925170356284,4.89083433666378,3.56697498905078,6.86403532970204,2.87536413054709,2.97712758134803,1.87222603868736,1.26289438973556,0.538192240565737,0.482443521363367,3.14080423283228,20.4650724712124,23.7928865605358,22.2366062365496,22.5302638356962,25.460951131156,24.5184950112594,27.9041116436652,35.6255425679992,33.2197034473162,37.631325403167,15.8947415274266,15.7143333497965,13.5970115066621,0,0,0,4.41498794087572,47.844075816362,40.2036085011257,0,8.58401152494868,24.2941328950518,25.7689571235781,32.9597798531182,44.4481964191747,50.3525003426211,49.5383928880457,23.4790206971439,32.4404002281556,36.7617633490267,41.4504498184131,53.369472038309,18.16269157406,21.8268525533792,16.0021019283359,0,14.5668381692989,15.4185014052023,10.7504895460862,6.79194353625777,12.2974059177571,10.8539883130653,10.5424781548477,10.6949213515416,4.10847785316561,0,0,9.87274856685985,25.7487364464774,17.8514983620201,20.7906923980645,19.1527452333655,22.652839835463,28.9606276259733,19.790221692449,4.69343416127421,14.8282449604674,3.74898276693435,28.855094264759,106.243592765906,85.7046663229095,56.821235745493,38.4089705403443,2.91480836629851,52.6607857709848,24.6054068348908,11.144890870014,15.0007567169466,32.5877430618115,34.8570280688614,29.5123843436414,5.60928818979723,4.19854356970974,5.38979897837253,28.6401185404534,22.6180235410512,23.3817387195876,27.6493672503811,34.7086571384018,44.3276004404741,77.0075417857326,66.2880714917194,40.0486591235565,34.8664278154923,3.72803587852155,6.76431526421028,29.6042761167078,29.4516113013634,26.8342639914786,29.9650790468336,37.6772159844435,39.1973177076818,43.6184689227233,72.0383696204634,29.2316786199467,21.6022504693399,1.58005560314089,4.66267995167378,2.67048488628551,2.46849563657811,5.19177417435696,3.77494574084403,1.802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| |||
|short_description=p1@Mboat2 | |||
}} |
Revision as of 22:10, 4 August 2015
Short description: | p1@Mboat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mboat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 0bp_to_ENSMUST00000078902, ENSMUST00000110942, NM_001083341, NM_026037, uc007net.1, uc007neu.1, uc007nev.1, uc007new.1, uc007nex.1_5end |
EntrezGene: | 67216 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.01e-12 | 33 |
neuronal stem cell | 3.01e-12 | 33 |
neuroblast | 3.01e-12 | 33 |
electrically signaling cell | 3.01e-12 | 33 |
ectodermal cell | 1.32e-10 | 44 |
neurectodermal cell | 1.32e-10 | 44 |
neural cell | 4.76e-10 | 43 |
CNS neuron (sensu Vertebrata) | 5.61e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.61e-09 | 23 |
electrically responsive cell | 4.05e-08 | 39 |
electrically active cell | 4.05e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.27e-22 | 95 |
ectoderm | 1.27e-22 | 95 |
presumptive ectoderm | 1.27e-22 | 95 |
nervous system | 1.63e-18 | 75 |
ecto-epithelium | 2.37e-18 | 73 |
central nervous system | 5.75e-18 | 73 |
neurectoderm | 4.97e-16 | 64 |
neural plate | 4.97e-16 | 64 |
presumptive neural plate | 4.97e-16 | 64 |
regional part of nervous system | 3.46e-13 | 54 |
structure with developmental contribution from neural crest | 1.38e-12 | 92 |
neural tube | 2.64e-12 | 52 |
neural rod | 2.64e-12 | 52 |
future spinal cord | 2.64e-12 | 52 |
neural keel | 2.64e-12 | 52 |
pre-chordal neural plate | 5.89e-12 | 49 |
gray matter | 2.33e-10 | 34 |
brain | 4.94e-10 | 47 |
future brain | 4.94e-10 | 47 |
regional part of brain | 1.39e-09 | 46 |
anterior neural tube | 4.50e-09 | 40 |
embryo | 1.21e-08 | 320 |
regional part of forebrain | 1.36e-08 | 39 |
forebrain | 1.36e-08 | 39 |
future forebrain | 1.36e-08 | 39 |
brain grey matter | 3.77e-08 | 29 |
regional part of telencephalon | 3.77e-08 | 29 |
telencephalon | 3.77e-08 | 29 |