FFCP PHASE1:Mm9::chr6:114198339..114198355,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:114198339..114198355,+|id=chr6:114198339..114198355,+|ontology_enrichment_celltype=CL:0000117!2.66e-15!23;CL:0000337!2.66e-15!23;CL:0000540!1.43e-09!33;CL:0000047!1.43e-09!33;CL:0000031!1.43e-09!33;CL:0000404!1.43e-09!33;CL:0002610!1.14e-07!3;CL:0002319!1.33e-07!43;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39;CL:0002614!2.03e-07!3;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44;CL:0002612!4.49e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-22,23;CL:0000337,3.01e-22,23;CL:0002610,3.53e-17,3;CL:0002614,1.52e-16,3;CL:0000540,4.15e-15,33;CL:0000047,4.15e-15,33;CL:0000031,4.15e-15,33;CL:0000404,4.15e-15,33;CL:0000393,1.42e-12,39;CL:0000211,1.42e-12,39;CL:0002611,7.13e-12,2;CL:0002319,2.82e-11,43;CL:0000221,5.47e-11,44;CL:0000133,5.47e-11,44;CL:0002612,3.63e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-24!73;UBERON:0005743!1.10e-24!73;UBERON:0001049!4.99e-24!52;UBERON:0005068!4.99e-24!52;UBERON:0006241!4.99e-24!52;UBERON:0007135!4.99e-24!52;UBERON:0000073!8.52e-24!75;UBERON:0001016!8.52e-24!75;UBERON:0000955!3.14e-21!50;UBERON:0006238!3.14e-21!50;UBERON:0002346!6.44e-20!71;UBERON:0003075!6.44e-20!71;UBERON:0007284!6.44e-20!71;UBERON:0002616!7.62e-20!49;UBERON:0002020!3.60e-19!34;UBERON:0004121!6.65e-19!102;UBERON:0000924!6.65e-19!102;UBERON:0006601!6.65e-19!102;UBERON:0000033!1.90e-18!63;UBERON:0003076!1.08e-15!12;UBERON:0003057!1.08e-15!12;UBERON:0002298!6.85e-13!6;UBERON:0002240!8.62e-13!6;UBERON:0005174!8.62e-13!6;UBERON:0001137!8.62e-13!6;UBERON:0002791!6.91e-12!29;UBERON:0003528!6.91e-12!29;UBERON:0001893!6.91e-12!29;UBERON:0003080!8.23e-12!40;UBERON:0007811!1.37e-11!86;UBERON:0003056!2.53e-11!49;UBERON:0001948!4.64e-11!5;UBERON:0002315!4.64e-11!5;UBERON:0002780!1.19e-10!39;UBERON:0001890!1.19e-10!39;UBERON:0006240!1.19e-10!39;UBERON:0000153!5.23e-10!94;UBERON:0002950!3.13e-09!4;UBERON:0001891!3.13e-09!4;UBERON:0009616!3.13e-09!4;UBERON:0004684!1.14e-07!3;UBERON:0002275!1.14e-07!3;UBERON:0002619!1.18e-07!17;UBERON:0002038!2.03e-07!3;UBERON:0002308!2.03e-07!3;UBERON:0009663!2.03e-07!3;UBERON:0009661!2.03e-07!3;UBERON:0006331!2.03e-07!3;UBERON:0000125!2.03e-07!3;UBERON:0000956!3.63e-07!21;UBERON:0001869!3.63e-07!21;UBERON:0000203!3.63e-07!21;UBERON:0000025!4.17e-07!114;UBERON:0002257!4.49e-07!3;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.86e-23,54;UBERON:0002950,3.62e-21,4;UBERON:0001891,3.62e-21,4;UBERON:0009616,3.62e-21,4;UBERON:0010286,3.62e-21,4;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001948,1.16e-17,5;UBERON:0002315,1.16e-17,5;UBERON:0004684,3.53e-17,3;UBERON:0002275,3.53e-17,3;UBERON:0002038,1.52e-16,3;UBERON:0009663,1.52e-16,3;UBERON:0009661,1.52e-16,3;UBERON:0000125,1.52e-16,3;UBERON:0002308,1.52e-16,3;UBERON:0003076,1.52e-15,12;UBERON:0003057,1.52e-15,12;UBERON:0001049,3.81e-15,52;UBERON:0005068,3.81e-15,52;UBERON:0006241,3.81e-15,52;UBERON:0007135,3.81e-15,52;UBERON:0002240,9.28e-15,6;UBERON:0005174,9.28e-15,6;UBERON:0001137,9.28e-15,6;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002346,5.80e-12,64;UBERON:0003075,5.80e-12,64;UBERON:0007284,5.80e-12,64;UBERON:0002256,7.13e-12,2;UBERON:0002020,1.77e-11,34;UBERON:0001896,4.88e-11,2;UBERON:0002298,4.88e-11,2;UBERON:0005290,4.88e-11,2;UBERON:0010096,4.88e-11,2;UBERON:0010371,2.94e-10,73;UBERON:0000955,1.67e-09,47;UBERON:0006238,1.67e-09,47;UBERON:0002257,3.63e-08,3;UBERON:0002616,6.92e-08,46;UBERON:0010314,9.60e-08,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,8.56952953211411,3.97563373712904,0.367472397644862,0,0,6.60695285996332,5.49055553766307,5.06901559745603,0,0.548925861614458,0,4.74611098302348,3.93933827022176,4.73674568108111,5.89257170947335,4.41352210477219,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,0,0.173824320192276,0,2.0778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,1.3748254587495,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr6:114198339..114198355,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:114198339..114198355,+ | |||
|description=CAGE_peak_at_chr6:114198339..114198355,+ | |||
|id=chr6:114198339..114198355,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.66e-15!23;CL:0000337!2.66e-15!23;CL:0000540!1.43e-09!33;CL:0000047!1.43e-09!33;CL:0000031!1.43e-09!33;CL:0000404!1.43e-09!33;CL:0002610!1.14e-07!3;CL:0002319!1.33e-07!43;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39;CL:0002614!2.03e-07!3;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44;CL:0002612!4.49e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-22,23;CL:0000337,3.01e-22,23;CL:0002610,3.53e-17,3;CL:0002614,1.52e-16,3;CL:0000540,4.15e-15,33;CL:0000047,4.15e-15,33;CL:0000031,4.15e-15,33;CL:0000404,4.15e-15,33;CL:0000393,1.42e-12,39;CL:0000211,1.42e-12,39;CL:0002611,7.13e-12,2;CL:0002319,2.82e-11,43;CL:0000221,5.47e-11,44;CL:0000133,5.47e-11,44;CL:0002612,3.63e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-24!73;UBERON:0005743!1.10e-24!73;UBERON:0001049!4.99e-24!52;UBERON:0005068!4.99e-24!52;UBERON:0006241!4.99e-24!52;UBERON:0007135!4.99e-24!52;UBERON:0000073!8.52e-24!75;UBERON:0001016!8.52e-24!75;UBERON:0000955!3.14e-21!50;UBERON:0006238!3.14e-21!50;UBERON:0002346!6.44e-20!71;UBERON:0003075!6.44e-20!71;UBERON:0007284!6.44e-20!71;UBERON:0002616!7.62e-20!49;UBERON:0002020!3.60e-19!34;UBERON:0004121!6.65e-19!102;UBERON:0000924!6.65e-19!102;UBERON:0006601!6.65e-19!102;UBERON:0000033!1.90e-18!63;UBERON:0003076!1.08e-15!12;UBERON:0003057!1.08e-15!12;UBERON:0002298!6.85e-13!6;UBERON:0002240!8.62e-13!6;UBERON:0005174!8.62e-13!6;UBERON:0001137!8.62e-13!6;UBERON:0002791!6.91e-12!29;UBERON:0003528!6.91e-12!29;UBERON:0001893!6.91e-12!29;UBERON:0003080!8.23e-12!40;UBERON:0007811!1.37e-11!86;UBERON:0003056!2.53e-11!49;UBERON:0001948!4.64e-11!5;UBERON:0002315!4.64e-11!5;UBERON:0002780!1.19e-10!39;UBERON:0001890!1.19e-10!39;UBERON:0006240!1.19e-10!39;UBERON:0000153!5.23e-10!94;UBERON:0002950!3.13e-09!4;UBERON:0001891!3.13e-09!4;UBERON:0009616!3.13e-09!4;UBERON:0004684!1.14e-07!3;UBERON:0002275!1.14e-07!3;UBERON:0002619!1.18e-07!17;UBERON:0002038!2.03e-07!3;UBERON:0002308!2.03e-07!3;UBERON:0009663!2.03e-07!3;UBERON:0009661!2.03e-07!3;UBERON:0006331!2.03e-07!3;UBERON:0000125!2.03e-07!3;UBERON:0000956!3.63e-07!21;UBERON:0001869!3.63e-07!21;UBERON:0000203!3.63e-07!21;UBERON:0000025!4.17e-07!114;UBERON:0002257!4.49e-07!3;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.86e-23,54;UBERON:0002950,3.62e-21,4;UBERON:0001891,3.62e-21,4;UBERON:0009616,3.62e-21,4;UBERON:0010286,3.62e-21,4;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001948,1.16e-17,5;UBERON:0002315,1.16e-17,5;UBERON:0004684,3.53e-17,3;UBERON:0002275,3.53e-17,3;UBERON:0002038,1.52e-16,3;UBERON:0009663,1.52e-16,3;UBERON:0009661,1.52e-16,3;UBERON:0000125,1.52e-16,3;UBERON:0002308,1.52e-16,3;UBERON:0003076,1.52e-15,12;UBERON:0003057,1.52e-15,12;UBERON:0001049,3.81e-15,52;UBERON:0005068,3.81e-15,52;UBERON:0006241,3.81e-15,52;UBERON:0007135,3.81e-15,52;UBERON:0002240,9.28e-15,6;UBERON:0005174,9.28e-15,6;UBERON:0001137,9.28e-15,6;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002346,5.80e-12,64;UBERON:0003075,5.80e-12,64;UBERON:0007284,5.80e-12,64;UBERON:0002256,7.13e-12,2;UBERON:0002020,1.77e-11,34;UBERON:0001896,4.88e-11,2;UBERON:0002298,4.88e-11,2;UBERON:0005290,4.88e-11,2;UBERON:0010096,4.88e-11,2;UBERON:0010371,2.94e-10,73;UBERON:0000955,1.67e-09,47;UBERON:0006238,1.67e-09,47;UBERON:0002257,3.63e-08,3;UBERON:0002616,6.92e-08,46;UBERON:0010314,9.60e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,8.56952953211411,3.97563373712904,0.367472397644862,0,0,6.60695285996332,5.49055553766307,5.06901559745603,0,0.548925861614458,0,4.74611098302348,3.93933827022176,4.73674568108111,5.89257170947335,4.41352210477219,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,0,0.173824320192276,0,2.0778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,1.3748254587495,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr6:114198339..114198355,+ | |||
}} |
Latest revision as of 22:30, 4 August 2015
Short description: | p@chr6:114198339..114198355, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:114198339..114198355, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.01e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.01e-22 | 23 |
raphe nuclei neuron | 3.53e-17 | 3 |
neuron of the substantia nigra | 1.52e-16 | 3 |
neuron | 4.15e-15 | 33 |
neuronal stem cell | 4.15e-15 | 33 |
neuroblast | 4.15e-15 | 33 |
electrically signaling cell | 4.15e-15 | 33 |
electrically responsive cell | 1.42e-12 | 39 |
electrically active cell | 1.42e-12 | 39 |
neuron of the dorsal spinal cord | 7.13e-12 | 2 |
neural cell | 2.82e-11 | 43 |
ectodermal cell | 5.47e-11 | 44 |
neurectodermal cell | 5.47e-11 | 44 |
neuron of the ventral spinal cord | 3.63e-08 | 3 |