FFCP PHASE1:Mm9::chr6:114198370..114198396,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:114198370..114198396,+|id=chr6:114198370..114198396,+|ontology_enrichment_celltype=CL:0000117!7.74e-16!23;CL:0000337!7.74e-16!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0000221!4.51e-09!44;CL:0000133!4.51e-09!44;CL:0002319!1.49e-08!43;CL:0000393!5.51e-08!39;CL:0000211!5.51e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.04e-20,23;CL:0000337,9.04e-20,23;CL:0000540,3.39e-13,33;CL:0000047,3.39e-13,33;CL:0000031,3.39e-13,33;CL:0000404,3.39e-13,33;CL:0002610,4.15e-13,3;CL:0002614,6.55e-13,3;CL:0002319,1.58e-11,43;CL:0000221,3.24e-11,44;CL:0000133,3.24e-11,44;CL:0000393,7.23e-11,39;CL:0000211,7.23e-11,39;CL:0002611,2.41e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.12e-27!75;UBERON:0001016!1.12e-27!75;UBERON:0001017!1.46e-27!73;UBERON:0005743!1.46e-27!73;UBERON:0001049!3.70e-27!52;UBERON:0005068!3.70e-27!52;UBERON:0006241!3.70e-27!52;UBERON:0007135!3.70e-27!52;UBERON:0000033!2.33e-26!63;UBERON:0000955!9.80e-25!50;UBERON:0006238!9.80e-25!50;UBERON:0002616!1.51e-23!49;UBERON:0004121!7.96e-23!102;UBERON:0000924!7.96e-23!102;UBERON:0006601!7.96e-23!102;UBERON:0002346!1.06e-22!71;UBERON:0003075!1.06e-22!71;UBERON:0007284!1.06e-22!71;UBERON:0002020!1.72e-19!34;UBERON:0003056!1.36e-18!49;UBERON:0003080!3.31e-17!40;UBERON:0002780!4.18e-16!39;UBERON:0001890!4.18e-16!39;UBERON:0006240!4.18e-16!39;UBERON:0007811!6.15e-16!86;UBERON:0002791!1.35e-13!29;UBERON:0003528!1.35e-13!29;UBERON:0001893!1.35e-13!29;UBERON:0000153!1.51e-13!94;UBERON:0003076!5.93e-11!12;UBERON:0003057!5.93e-11!12;UBERON:0002240!1.97e-09!6;UBERON:0005174!1.97e-09!6;UBERON:0001137!1.97e-09!6;UBERON:0002298!2.88e-09!6;UBERON:0000956!3.51e-09!21;UBERON:0001869!3.51e-09!21;UBERON:0000203!3.51e-09!21;UBERON:0002619!9.20e-09!17;UBERON:0001948!3.24e-08!5;UBERON:0002315!3.24e-08!5;UBERON:0002021!5.29e-08!10;UBERON:0000411!5.29e-08!10;UBERON:0001950!5.29e-08!10;UBERON:0000025!5.11e-07!114;UBERON:0004111!6.60e-07!122;UBERON:0002950!7.14e-07!4;UBERON:0001891!7.14e-07!4;UBERON:0009616!7.14e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0000073,2.60e-23,54;UBERON:0001049,8.55e-19,52;UBERON:0005068,8.55e-19,52;UBERON:0006241,8.55e-19,52;UBERON:0007135,8.55e-19,52;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0002240,3.91e-17,6;UBERON:0005174,3.91e-17,6;UBERON:0001137,3.91e-17,6;UBERON:0002950,1.64e-16,4;UBERON:0001891,1.64e-16,4;UBERON:0009616,1.64e-16,4;UBERON:0010286,1.64e-16,4;UBERON:0003076,1.28e-15,12;UBERON:0003057,1.28e-15,12;UBERON:0002346,1.06e-14,64;UBERON:0003075,1.06e-14,64;UBERON:0007284,1.06e-14,64;UBERON:0001948,8.89e-14,5;UBERON:0002315,8.89e-14,5;UBERON:0004684,4.15e-13,3;UBERON:0002275,4.15e-13,3;UBERON:0002038,6.55e-13,3;UBERON:0009663,6.55e-13,3;UBERON:0009661,6.55e-13,3;UBERON:0000125,6.55e-13,3;UBERON:0002308,6.55e-13,3;UBERON:0010371,1.63e-12,73;UBERON:0002020,2.37e-12,34;UBERON:0000955,1.73e-11,47;UBERON:0006238,1.73e-11,47;UBERON:0002616,6.58e-10,46;UBERON:0002256,2.41e-09,2;UBERON:0010314,2.72e-09,92;UBERON:0001896,2.28e-08,2;UBERON:0002298,2.28e-08,2;UBERON:0005290,2.28e-08,2;UBERON:0010096,2.28e-08,2;UBERON:0003080,5.02e-08,40;UBERON:0011216,3.78e-07,194;UBERON:0000025,6.74e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0,8.2838785477103,6.40518768759679,0.122490799214954,0.191690942036473,0,9.91042928994498,5.36286819957788,6.91229399653096,0.131886287730194,0.274462930807229,0,7.81712397203867,6.19038871034848,4.88954392885792,11.490514833473,7.54569908235246,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,4.19413790333504,0.915001205637253,0,0.521472960576829,0.767146371990992,2.0778804455956,1.46017136760982,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,2.29158205375759,1.3748254587495,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0.578727661391115,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p@chr6:114198370..114198396,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:114198370..114198396,+ | |||
|description=CAGE_peak_at_chr6:114198370..114198396,+ | |||
|id=chr6:114198370..114198396,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.74e-16!23;CL:0000337!7.74e-16!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0000221!4.51e-09!44;CL:0000133!4.51e-09!44;CL:0002319!1.49e-08!43;CL:0000393!5.51e-08!39;CL:0000211!5.51e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.04e-20,23;CL:0000337,9.04e-20,23;CL:0000540,3.39e-13,33;CL:0000047,3.39e-13,33;CL:0000031,3.39e-13,33;CL:0000404,3.39e-13,33;CL:0002610,4.15e-13,3;CL:0002614,6.55e-13,3;CL:0002319,1.58e-11,43;CL:0000221,3.24e-11,44;CL:0000133,3.24e-11,44;CL:0000393,7.23e-11,39;CL:0000211,7.23e-11,39;CL:0002611,2.41e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-27!75;UBERON:0001016!1.12e-27!75;UBERON:0001017!1.46e-27!73;UBERON:0005743!1.46e-27!73;UBERON:0001049!3.70e-27!52;UBERON:0005068!3.70e-27!52;UBERON:0006241!3.70e-27!52;UBERON:0007135!3.70e-27!52;UBERON:0000033!2.33e-26!63;UBERON:0000955!9.80e-25!50;UBERON:0006238!9.80e-25!50;UBERON:0002616!1.51e-23!49;UBERON:0004121!7.96e-23!102;UBERON:0000924!7.96e-23!102;UBERON:0006601!7.96e-23!102;UBERON:0002346!1.06e-22!71;UBERON:0003075!1.06e-22!71;UBERON:0007284!1.06e-22!71;UBERON:0002020!1.72e-19!34;UBERON:0003056!1.36e-18!49;UBERON:0003080!3.31e-17!40;UBERON:0002780!4.18e-16!39;UBERON:0001890!4.18e-16!39;UBERON:0006240!4.18e-16!39;UBERON:0007811!6.15e-16!86;UBERON:0002791!1.35e-13!29;UBERON:0003528!1.35e-13!29;UBERON:0001893!1.35e-13!29;UBERON:0000153!1.51e-13!94;UBERON:0003076!5.93e-11!12;UBERON:0003057!5.93e-11!12;UBERON:0002240!1.97e-09!6;UBERON:0005174!1.97e-09!6;UBERON:0001137!1.97e-09!6;UBERON:0002298!2.88e-09!6;UBERON:0000956!3.51e-09!21;UBERON:0001869!3.51e-09!21;UBERON:0000203!3.51e-09!21;UBERON:0002619!9.20e-09!17;UBERON:0001948!3.24e-08!5;UBERON:0002315!3.24e-08!5;UBERON:0002021!5.29e-08!10;UBERON:0000411!5.29e-08!10;UBERON:0001950!5.29e-08!10;UBERON:0000025!5.11e-07!114;UBERON:0004111!6.60e-07!122;UBERON:0002950!7.14e-07!4;UBERON:0001891!7.14e-07!4;UBERON:0009616!7.14e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0000073,2.60e-23,54;UBERON:0001049,8.55e-19,52;UBERON:0005068,8.55e-19,52;UBERON:0006241,8.55e-19,52;UBERON:0007135,8.55e-19,52;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0002240,3.91e-17,6;UBERON:0005174,3.91e-17,6;UBERON:0001137,3.91e-17,6;UBERON:0002950,1.64e-16,4;UBERON:0001891,1.64e-16,4;UBERON:0009616,1.64e-16,4;UBERON:0010286,1.64e-16,4;UBERON:0003076,1.28e-15,12;UBERON:0003057,1.28e-15,12;UBERON:0002346,1.06e-14,64;UBERON:0003075,1.06e-14,64;UBERON:0007284,1.06e-14,64;UBERON:0001948,8.89e-14,5;UBERON:0002315,8.89e-14,5;UBERON:0004684,4.15e-13,3;UBERON:0002275,4.15e-13,3;UBERON:0002038,6.55e-13,3;UBERON:0009663,6.55e-13,3;UBERON:0009661,6.55e-13,3;UBERON:0000125,6.55e-13,3;UBERON:0002308,6.55e-13,3;UBERON:0010371,1.63e-12,73;UBERON:0002020,2.37e-12,34;UBERON:0000955,1.73e-11,47;UBERON:0006238,1.73e-11,47;UBERON:0002616,6.58e-10,46;UBERON:0002256,2.41e-09,2;UBERON:0010314,2.72e-09,92;UBERON:0001896,2.28e-08,2;UBERON:0002298,2.28e-08,2;UBERON:0005290,2.28e-08,2;UBERON:0010096,2.28e-08,2;UBERON:0003080,5.02e-08,40;UBERON:0011216,3.78e-07,194;UBERON:0000025,6.74e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0,8.2838785477103,6.40518768759679,0.122490799214954,0.191690942036473,0,9.91042928994498,5.36286819957788,6.91229399653096,0.131886287730194,0.274462930807229,0,7.81712397203867,6.19038871034848,4.88954392885792,11.490514833473,7.54569908235246,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,4.19413790333504,0.915001205637253,0,0.521472960576829,0.767146371990992,2.0778804455956,1.46017136760982,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,2.29158205375759,1.3748254587495,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0.578727661391115,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr6:114198370..114198396,+ | |||
}} |
Latest revision as of 22:31, 4 August 2015
Short description: | p@chr6:114198370..114198396, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:114198370..114198396, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.04e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.04e-20 | 23 |
neuron | 3.39e-13 | 33 |
neuronal stem cell | 3.39e-13 | 33 |
neuroblast | 3.39e-13 | 33 |
electrically signaling cell | 3.39e-13 | 33 |
raphe nuclei neuron | 4.15e-13 | 3 |
neuron of the substantia nigra | 6.55e-13 | 3 |
neural cell | 1.58e-11 | 43 |
ectodermal cell | 3.24e-11 | 44 |
neurectodermal cell | 3.24e-11 | 44 |
electrically responsive cell | 7.23e-11 | 39 |
electrically active cell | 7.23e-11 | 39 |
neuron of the dorsal spinal cord | 2.41e-09 | 2 |