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FFCP PHASE1:Mm9::chr1:162142995..162143004,-: Difference between revisions

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{{FFCP|EntrezGene=12301|HGNC=|UniProt=Q9CXW3|association_with_transcript=18bp_to_NM_009786_5end|description=CAGE_peak_3_at_Cacybp_5end|id=chr1:162142995..162143004,-|ontology_enrichment_celltype=CL:0000117!1.11e-09!23;CL:0000337!1.11e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-15,23;CL:0000337,2.82e-15,23;CL:0000540,2.06e-08,33;CL:0000047,2.06e-08,33;CL:0000031,2.06e-08,33;CL:0000404,2.06e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.34e-11!52;UBERON:0005068!3.34e-11!52;UBERON:0006241!3.34e-11!52;UBERON:0007135!3.34e-11!52;UBERON:0000033!6.44e-11!63;UBERON:0002346!2.12e-10!71;UBERON:0003075!2.12e-10!71;UBERON:0007284!2.12e-10!71;UBERON:0002616!6.66e-10!49;UBERON:0003056!1.20e-09!49;UBERON:0000955!1.62e-09!50;UBERON:0006238!1.62e-09!50;UBERON:0002020!4.81e-09!34;UBERON:0003080!2.30e-08!40;UBERON:0000073!5.04e-08!75;UBERON:0001016!5.04e-08!75;UBERON:0004121!5.13e-08!102;UBERON:0000924!5.13e-08!102;UBERON:0006601!5.13e-08!102;UBERON:0002780!6.08e-08!39;UBERON:0001890!6.08e-08!39;UBERON:0006240!6.08e-08!39;UBERON:0001017!1.77e-07!73;UBERON:0005743!1.77e-07!73;UBERON:0004111!2.30e-07!122;UBERON:0000025!4.87e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.38e-17,54;UBERON:0001049,4.52e-15,52;UBERON:0005068,4.52e-15,52;UBERON:0006241,4.52e-15,52;UBERON:0007135,4.52e-15,52;UBERON:0002346,1.27e-13,64;UBERON:0003075,1.27e-13,64;UBERON:0007284,1.27e-13,64;UBERON:0002020,4.27e-12,34;UBERON:0001016,1.10e-11,75;UBERON:0003080,1.53e-11,40;UBERON:0003056,2.20e-11,49;UBERON:0002780,6.69e-11,39;UBERON:0001890,6.69e-11,39;UBERON:0006240,6.69e-11,39;UBERON:0001017,7.72e-11,73;UBERON:0002616,9.44e-11,46;UBERON:0010371,2.43e-10,73;UBERON:0000955,2.57e-10,47;UBERON:0006238,2.57e-10,47;UBERON:0010314,3.55e-10,92;UBERON:0004121,4.92e-09,95;UBERON:0000924,4.92e-09,95;UBERON:0006601,4.92e-09,95;UBERON:0003528,1.71e-08,29;UBERON:0002791,1.71e-08,29;UBERON:0001893,1.71e-08,29|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0.0992909512008853,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,2.09409497589519,1.17646297606203,2.04913645487534,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0.419959264876088,0,0.335565212115473,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,3.00699875694585,1.35005938331691,1.68259969081106,1.71390590642282,1.32521124570968,2.32732518508413,2.20444583341944,0,3.30347642998166,3.06449611404451,2.91852413186863,1.45074916503213,3.56801810049398,2.08365348222704,2.51264699101243,1.68828783009504,3.20876320331301,3.53554302568401,5.55249555116501,2.05039390407831,1.66597625333005,1.058001841495,0.579728977403356,0,0,1.07940638327563,0.649776417447669,0,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,0.593768556259299,1.21439728736295,0.304465478312141,0.691846491768175,0.60289056221049,1.29347577849275,0.125666591329675,0.247194967734374,0.433798070759735,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0.878342391034642,0.83778682725382,0.766371165625774,0.599075622529601,1.19980546198682,1.01656181658452,1.64769703345305,0,1.38219787324151,0.869121600961382,1.53429274398198,1.87009240103604,1.29793010454206,1.2220723662038,0.248813941220186,0.252722758433675,1.05220927943237,0.650602214813519,1.14951052216736,1.26043490863744,0.753524089178575,0.884474488967262,0.896796041993948,1.03071897015702,1.29351685369508,0.431135985865684,0.945530400839096,1.05570674498369,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.796137067273973,0,1.28673953557358,3.6941254921427,0.207125772535502,1.64168241986767,0.720248245844059,0.946978942340841,0.787056926989615,1.54267112887378,0.930135779001631,0.268273401399619,0.934122738937356,0.987359099480883,1.31333971263276,1.13496333364198,1.02339991197733,1.09775057645525,0.536825675041487,1.47202963994889,2.6755199218614,0,0.264450566663544,0.853153002140936,0.464473343720877,0.902072229254653,0.605050573870028,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,2.25415471346161,0.610953983535943,1.16371492300575,0.98190147846446,0.569128834118316,0.590440591918409,0.627994911365499,0.246794327843601,0.592905254174298,1.16791574001266,0.786235980452812,0.674586337154561,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.3587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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12301
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9CXW3
|association_with_transcript=18bp_to_NM_009786_5end
|cluster_id=chr1:162142995..162143004,-
|description=CAGE_peak_3_at_Cacybp_5end
|id=chr1:162142995..162143004,-
|ontology_enrichment_celltype=CL:0000117!1.11e-09!23;CL:0000337!1.11e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-15,23;CL:0000337,2.82e-15,23;CL:0000540,2.06e-08,33;CL:0000047,2.06e-08,33;CL:0000031,2.06e-08,33;CL:0000404,2.06e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.34e-11!52;UBERON:0005068!3.34e-11!52;UBERON:0006241!3.34e-11!52;UBERON:0007135!3.34e-11!52;UBERON:0000033!6.44e-11!63;UBERON:0002346!2.12e-10!71;UBERON:0003075!2.12e-10!71;UBERON:0007284!2.12e-10!71;UBERON:0002616!6.66e-10!49;UBERON:0003056!1.20e-09!49;UBERON:0000955!1.62e-09!50;UBERON:0006238!1.62e-09!50;UBERON:0002020!4.81e-09!34;UBERON:0003080!2.30e-08!40;UBERON:0000073!5.04e-08!75;UBERON:0001016!5.04e-08!75;UBERON:0004121!5.13e-08!102;UBERON:0000924!5.13e-08!102;UBERON:0006601!5.13e-08!102;UBERON:0002780!6.08e-08!39;UBERON:0001890!6.08e-08!39;UBERON:0006240!6.08e-08!39;UBERON:0001017!1.77e-07!73;UBERON:0005743!1.77e-07!73;UBERON:0004111!2.30e-07!122;UBERON:0000025!4.87e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.38e-17,54;UBERON:0001049,4.52e-15,52;UBERON:0005068,4.52e-15,52;UBERON:0006241,4.52e-15,52;UBERON:0007135,4.52e-15,52;UBERON:0002346,1.27e-13,64;UBERON:0003075,1.27e-13,64;UBERON:0007284,1.27e-13,64;UBERON:0002020,4.27e-12,34;UBERON:0001016,1.10e-11,75;UBERON:0003080,1.53e-11,40;UBERON:0003056,2.20e-11,49;UBERON:0002780,6.69e-11,39;UBERON:0001890,6.69e-11,39;UBERON:0006240,6.69e-11,39;UBERON:0001017,7.72e-11,73;UBERON:0002616,9.44e-11,46;UBERON:0010371,2.43e-10,73;UBERON:0000955,2.57e-10,47;UBERON:0006238,2.57e-10,47;UBERON:0010314,3.55e-10,92;UBERON:0004121,4.92e-09,95;UBERON:0000924,4.92e-09,95;UBERON:0006601,4.92e-09,95;UBERON:0003528,1.71e-08,29;UBERON:0002791,1.71e-08,29;UBERON:0001893,1.71e-08,29
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0.0992909512008853,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,2.09409497589519,1.17646297606203,2.04913645487534,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0.419959264876088,0,0.335565212115473,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,3.00699875694585,1.35005938331691,1.68259969081106,1.71390590642282,1.32521124570968,2.32732518508413,2.20444583341944,0,3.30347642998166,3.06449611404451,2.91852413186863,1.45074916503213,3.56801810049398,2.08365348222704,2.51264699101243,1.68828783009504,3.20876320331301,3.53554302568401,5.55249555116501,2.05039390407831,1.66597625333005,1.058001841495,0.579728977403356,0,0,1.07940638327563,0.649776417447669,0,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,0.593768556259299,1.21439728736295,0.304465478312141,0.691846491768175,0.60289056221049,1.29347577849275,0.125666591329675,0.247194967734374,0.433798070759735,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0.878342391034642,0.83778682725382,0.766371165625774,0.599075622529601,1.19980546198682,1.01656181658452,1.64769703345305,0,1.38219787324151,0.869121600961382,1.53429274398198,1.87009240103604,1.29793010454206,1.2220723662038,0.248813941220186,0.252722758433675,1.05220927943237,0.650602214813519,1.14951052216736,1.26043490863744,0.753524089178575,0.884474488967262,0.896796041993948,1.03071897015702,1.29351685369508,0.431135985865684,0.945530400839096,1.05570674498369,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.796137067273973,0,1.28673953557358,3.6941254921427,0.207125772535502,1.64168241986767,0.720248245844059,0.946978942340841,0.787056926989615,1.54267112887378,0.930135779001631,0.268273401399619,0.934122738937356,0.987359099480883,1.31333971263276,1.13496333364198,1.02339991197733,1.09775057645525,0.536825675041487,1.47202963994889,2.6755199218614,0,0.264450566663544,0.853153002140936,0.464473343720877,0.902072229254653,0.605050573870028,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,2.25415471346161,0.610953983535943,1.16371492300575,0.98190147846446,0.569128834118316,0.590440591918409,0.627994911365499,0.246794327843601,0.592905254174298,1.16791574001266,0.786235980452812,0.674586337154561,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0,0.923765950833023,0.947457058852424,1.46668478797823,0.678980343100753,0.938760993154008,0.502518772325447,0.238043640886014,0.780534591431195,0.630540576424764,1.10732344824387,0.797273843287435,1.14704320301017,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,2.24770825982909,1.17211686592203,1.14754461763673,1.51482556322624,0,0.390438744296638,0,0.716906393857656,0.668396022247182,0.849229592366497,0.404810701674894,0.292255857911312,0,0.321321316421807,0.567760340833074,0.534196811001766,1.62886959353576,0.329940245945071,0,0,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0,0.356497378384721,0,0,0,1.70219802876894,1.98067203434441,0,1.28602221018955,1.41872186913819,1.42695054081656,0.987294123612726,0,0.938686832254841,0.847328283455281,0.882113592219848,0.32977250588296,0.645857706783622,0.663442174209714,0.477489376012546,0.656563598980245,0,2.22510362412612,0.170870880797853,0.412773735926445,1.48155621895769,0.376736914009382,0.410082683163076,0.457556346413045,1.5298058699447,0.979660166265606,1.52019971184866,0,1.42351197111511,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0,0.41326727862668,0,0.129614973291793,0.621339313086926,0.56369293868419,1.79419855252775,1.48912641411388,1.16670713006429,1.16243841129958,1.18269287843545,0.58678619322877,1.8228613878153,0.838874755405687,1.44950472495604,1.15212002503146,0.632022241256357,0.405450430580328,0.718976700153791,0.649604114888975,0.179026695667481,0.993406773906324,0.240390899039938,0.443068581523732,0.504832249740738,0.533447646584999,0.302478555410522,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,1.10992976687032,0.448569283047378,1.51096154727671,0.772758376128762,0.375364950902364,1.09890974560359,0.643105137237198,0.501572104035363,0.564751842617067,1.38097570952153,0,1.3748254587495,2.05524755931193,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,2.07104124700728,1.55681021376265,1.19707462020309,1.70733605754134,0.729320151204882,1.25767897576789,0.735374033800057,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.565879024158229,2.06011316433741,1.34452820050225,1.7230640686684,1.42888107384922,1.15884325944855,1.54327376370964,1.23625770240992,0.147198920134397,1.02860775715625,0.177475806159338,2.14592570952589,1.16277133305863,0.470546902076653,0.507687647350059,0.73171189149109,0.789209134313529,1.35804113845862,1.12228454331548,0.237270036248348,0.886540341380071,0.409231043169689,1.70430525304563,1.15743966588685,0,1.40358965067245,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264
|short_description=p3@Cacybp
}}

Revision as of 02:28, 5 August 2015

Short description:p3@Cacybp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cacybp_5end
Coexpression cluster:NA
Association with transcript: 18bp_to_NM_009786_5end
EntrezGene:12301
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Cacybp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.82e-1523
neuroblast (sensu Vertebrata)2.82e-1523
neuron2.06e-0833
neuronal stem cell2.06e-0833
neuroblast2.06e-0833
electrically signaling cell2.06e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.38e-1754
neural tube4.52e-1552
neural rod4.52e-1552
future spinal cord4.52e-1552
neural keel4.52e-1552
neurectoderm1.27e-1364
neural plate1.27e-1364
presumptive neural plate1.27e-1364
gray matter4.27e-1234
nervous system1.10e-1175
anterior neural tube1.53e-1140
pre-chordal neural plate2.20e-1149
regional part of forebrain6.69e-1139
forebrain6.69e-1139
future forebrain6.69e-1139
central nervous system7.72e-1173
regional part of brain9.44e-1146
ecto-epithelium2.43e-1073
brain2.57e-1047
future brain2.57e-1047
structure with developmental contribution from neural crest3.55e-1092
ectoderm-derived structure4.92e-0995
ectoderm4.92e-0995
presumptive ectoderm4.92e-0995
brain grey matter1.71e-0829
regional part of telencephalon1.71e-0829
telencephalon1.71e-0829
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