FFCP PHASE1:Mm9::chr6:124838183..124838199,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12504|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=17bp_to_ENSMUST00000151594_5end|description=CAGE_peak_2_at_Cd4_5end|id=chr6:124838183..124838199,-|ontology_enrichment_celltype=CL:0000624!8.03e-12!8;CL:0000791!2.80e-10!9;CL:0000789!2.80e-10!9;CL:0002420!2.80e-10!9;CL:0002419!2.80e-10!9;CL:0000790!2.80e-10!9;CL:0000893!3.33e-09!6;CL:0002489!3.33e-09!6;CL:0000898!3.33e-09!6;CL:0000809!3.33e-09!6;CL:0000810!3.33e-09!6;CL:0000895!3.33e-09!6;CL:0000808!3.33e-09!6;CL:0000894!3.33e-09!6;CL:0000806!3.33e-09!6;CL:0000807!3.33e-09!6;CL:0000805!3.33e-09!6;CL:0002425!3.33e-09!6;CL:0002436!3.33e-09!6;CL:0002427!3.33e-09!6;CL:0002428!3.33e-09!6;CL:0002429!3.33e-09!6;CL:0002433!3.33e-09!6;CL:0002431!3.33e-09!6;CL:0002432!3.33e-09!6;CL:0000838!9.18e-09!12;CL:0000084!4.77e-08!11;CL:0000827!4.77e-08!11;CL:0000542!6.46e-08!13;CL:0000051!6.46e-08!13;CL:0002031!5.93e-07!25|ontology_enrichment_celltype_v019_2=CL:0000624,3.01e-29,8;CL:0000791,6.86e-26,9;CL:0000789,6.86e-26,9;CL:0002420,6.86e-26,9;CL:0002419,6.86e-26,9;CL:0000790,6.86e-26,9;CL:0000893,3.65e-22,6;CL:0002489,3.65e-22,6;CL:0000898,3.65e-22,6;CL:0000809,3.65e-22,6;CL:0000810,3.65e-22,6;CL:0000895,3.65e-22,6;CL:0000808,3.65e-22,6;CL:0000894,3.65e-22,6;CL:0000806,3.65e-22,6;CL:0000807,3.65e-22,6;CL:0000805,3.65e-22,6;CL:0002425,3.65e-22,6;CL:0002436,3.65e-22,6;CL:0002427,3.65e-22,6;CL:0002428,3.65e-22,6;CL:0002429,3.65e-22,6;CL:0002433,3.65e-22,6;CL:0002431,3.65e-22,6;CL:0002432,3.65e-22,6;CL:0000084,5.30e-21,11;CL:0000827,5.30e-21,11;CL:0000838,3.62e-19,12;CL:0000542,1.29e-17,13;CL:0000051,1.29e-17,13;CL:0000738,3.17e-13,17;CL:0002087,3.17e-13,17;CL:0002031,1.19e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.04e-21!29;UBERON:0003408!2.29e-20!24;UBERON:0002370!3.58e-19!23;UBERON:0000974!3.58e-19!23;UBERON:0004807!3.58e-19!23;UBERON:0005058!3.58e-19!23;UBERON:0003351!3.58e-19!23;UBERON:0009113!3.58e-19!23;UBERON:0003295!3.58e-19!23;UBERON:0009722!3.58e-19!23;UBERON:0005562!3.58e-19!23;UBERON:0007690!3.58e-19!23;UBERON:0006562!4.06e-18!24;UBERON:0001557!4.06e-18!24;UBERON:0001042!4.06e-18!24;UBERON:0008814!4.06e-18!24;UBERON:0009145!4.06e-18!24;UBERON:0001004!6.56e-18!42;UBERON:0000065!7.23e-17!41;UBERON:0002390!1.56e-16!45;UBERON:0003061!1.56e-16!45;UBERON:0002193!1.73e-16!48;UBERON:0000072!1.97e-15!27;UBERON:0001041!1.08e-10!92;UBERON:0000063!1.41e-10!35;UBERON:0000077!2.41e-10!97;UBERON:0005057!4.61e-09!51;UBERON:0002405!1.01e-08!70;UBERON:0003081!7.67e-08!88;UBERON:0004921!2.22e-07!126;UBERON:0004185!2.22e-07!126;UBERON:0001007!4.18e-07!128;UBERON:0001555!4.18e-07!128;UBERON:0007026!4.18e-07!128;UBERON:0005911!5.20e-07!69;UBERON:0004119!7.70e-07!130;UBERON:0000925!7.70e-07!130;UBERON:0006595!7.70e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.81e-56,24;UBERON:0002370,5.60e-53,23;UBERON:0000974,5.60e-53,23;UBERON:0004807,5.60e-53,23;UBERON:0005058,5.60e-53,23;UBERON:0003351,5.60e-53,23;UBERON:0009113,5.60e-53,23;UBERON:0003295,5.60e-53,23;UBERON:0009722,5.60e-53,23;UBERON:0005562,5.60e-53,23;UBERON:0007690,5.60e-53,23;UBERON:0006562,1.20e-50,24;UBERON:0001557,1.20e-50,24;UBERON:0001042,1.20e-50,24;UBERON:0008814,1.20e-50,24;UBERON:0009145,1.20e-50,24;UBERON:0000072,1.09e-44,27;UBERON:0004177,2.11e-41,29;UBERON:0005057,2.11e-41,29;UBERON:0007811,1.71e-36,36;UBERON:0001004,3.22e-34,42;UBERON:0000077,8.71e-34,35;UBERON:0000065,1.12e-31,41;UBERON:0000153,4.86e-30,43;UBERON:0002193,1.17e-26,48;UBERON:0002405,1.17e-26,48;UBERON:0002390,1.35e-25,45;UBERON:0003061,1.35e-25,45;UBERON:0003929,2.25e-20,55;UBERON:0002530,8.79e-19,65;UBERON:0002368,2.06e-18,60;UBERON:0005911,1.63e-17,69;UBERON:0000490,1.89e-16,66;UBERON:0001041,2.16e-16,80;UBERON:0000949,8.20e-15,72;UBERON:0003081,1.06e-11,87;UBERON:0004921,1.79e-10,114;UBERON:0001007,3.13e-10,116;UBERON:0001555,3.13e-10,116;UBERON:0007026,3.13e-10,116;UBERON:0004119,5.35e-10,118;UBERON:0000925,5.35e-10,118;UBERON:0006595,5.35e-10,118;UBERON:0001048,2.22e-08,134;UBERON:0000926,1.40e-07,120;UBERON:0004120,1.40e-07,120;UBERON:0006603,1.40e-07,120|phase1_expression=0,0,0,0,0,0,0,10.0716192284429,7.03943610758334,9.83071010552373,1.54096171402954,2.23362045186942,17.6336751829142,23.6035086531293,0,0.809901069559304,0,0.630924330716475,0.685572168028694,0.42438965179803,0.850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,13.7818806982155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.324275238183423,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,1.50755631697634,0,0.195133647857799,0.472905432318573,0,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.565105371014073,0.820165366326151,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,46.7696458529704,0,0,1.55904987573354,9.84646826171148,27.6167083145958,27.164171591513,31.4578692881849,37.0546871309702,31.0923771152399,46.6825237183572,46.3899512321222,46.1816839873581,45.815745655175,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0,0,0.355905054372522,0,0,0,0,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0|short_description=p2@Cd4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12504 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENSMUST00000151594_5end | |||
|cluster_id=chr6:124838183..124838199,- | |||
|description=CAGE_peak_2_at_Cd4_5end | |||
|id=chr6:124838183..124838199,- | |||
|ontology_enrichment_celltype=CL:0000624!8.03e-12!8;CL:0000791!2.80e-10!9;CL:0000789!2.80e-10!9;CL:0002420!2.80e-10!9;CL:0002419!2.80e-10!9;CL:0000790!2.80e-10!9;CL:0000893!3.33e-09!6;CL:0002489!3.33e-09!6;CL:0000898!3.33e-09!6;CL:0000809!3.33e-09!6;CL:0000810!3.33e-09!6;CL:0000895!3.33e-09!6;CL:0000808!3.33e-09!6;CL:0000894!3.33e-09!6;CL:0000806!3.33e-09!6;CL:0000807!3.33e-09!6;CL:0000805!3.33e-09!6;CL:0002425!3.33e-09!6;CL:0002436!3.33e-09!6;CL:0002427!3.33e-09!6;CL:0002428!3.33e-09!6;CL:0002429!3.33e-09!6;CL:0002433!3.33e-09!6;CL:0002431!3.33e-09!6;CL:0002432!3.33e-09!6;CL:0000838!9.18e-09!12;CL:0000084!4.77e-08!11;CL:0000827!4.77e-08!11;CL:0000542!6.46e-08!13;CL:0000051!6.46e-08!13;CL:0002031!5.93e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.01e-29,8;CL:0000791,6.86e-26,9;CL:0000789,6.86e-26,9;CL:0002420,6.86e-26,9;CL:0002419,6.86e-26,9;CL:0000790,6.86e-26,9;CL:0000893,3.65e-22,6;CL:0002489,3.65e-22,6;CL:0000898,3.65e-22,6;CL:0000809,3.65e-22,6;CL:0000810,3.65e-22,6;CL:0000895,3.65e-22,6;CL:0000808,3.65e-22,6;CL:0000894,3.65e-22,6;CL:0000806,3.65e-22,6;CL:0000807,3.65e-22,6;CL:0000805,3.65e-22,6;CL:0002425,3.65e-22,6;CL:0002436,3.65e-22,6;CL:0002427,3.65e-22,6;CL:0002428,3.65e-22,6;CL:0002429,3.65e-22,6;CL:0002433,3.65e-22,6;CL:0002431,3.65e-22,6;CL:0002432,3.65e-22,6;CL:0000084,5.30e-21,11;CL:0000827,5.30e-21,11;CL:0000838,3.62e-19,12;CL:0000542,1.29e-17,13;CL:0000051,1.29e-17,13;CL:0000738,3.17e-13,17;CL:0002087,3.17e-13,17;CL:0002031,1.19e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.04e-21!29;UBERON:0003408!2.29e-20!24;UBERON:0002370!3.58e-19!23;UBERON:0000974!3.58e-19!23;UBERON:0004807!3.58e-19!23;UBERON:0005058!3.58e-19!23;UBERON:0003351!3.58e-19!23;UBERON:0009113!3.58e-19!23;UBERON:0003295!3.58e-19!23;UBERON:0009722!3.58e-19!23;UBERON:0005562!3.58e-19!23;UBERON:0007690!3.58e-19!23;UBERON:0006562!4.06e-18!24;UBERON:0001557!4.06e-18!24;UBERON:0001042!4.06e-18!24;UBERON:0008814!4.06e-18!24;UBERON:0009145!4.06e-18!24;UBERON:0001004!6.56e-18!42;UBERON:0000065!7.23e-17!41;UBERON:0002390!1.56e-16!45;UBERON:0003061!1.56e-16!45;UBERON:0002193!1.73e-16!48;UBERON:0000072!1.97e-15!27;UBERON:0001041!1.08e-10!92;UBERON:0000063!1.41e-10!35;UBERON:0000077!2.41e-10!97;UBERON:0005057!4.61e-09!51;UBERON:0002405!1.01e-08!70;UBERON:0003081!7.67e-08!88;UBERON:0004921!2.22e-07!126;UBERON:0004185!2.22e-07!126;UBERON:0001007!4.18e-07!128;UBERON:0001555!4.18e-07!128;UBERON:0007026!4.18e-07!128;UBERON:0005911!5.20e-07!69;UBERON:0004119!7.70e-07!130;UBERON:0000925!7.70e-07!130;UBERON:0006595!7.70e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.81e-56,24;UBERON:0002370,5.60e-53,23;UBERON:0000974,5.60e-53,23;UBERON:0004807,5.60e-53,23;UBERON:0005058,5.60e-53,23;UBERON:0003351,5.60e-53,23;UBERON:0009113,5.60e-53,23;UBERON:0003295,5.60e-53,23;UBERON:0009722,5.60e-53,23;UBERON:0005562,5.60e-53,23;UBERON:0007690,5.60e-53,23;UBERON:0006562,1.20e-50,24;UBERON:0001557,1.20e-50,24;UBERON:0001042,1.20e-50,24;UBERON:0008814,1.20e-50,24;UBERON:0009145,1.20e-50,24;UBERON:0000072,1.09e-44,27;UBERON:0004177,2.11e-41,29;UBERON:0005057,2.11e-41,29;UBERON:0007811,1.71e-36,36;UBERON:0001004,3.22e-34,42;UBERON:0000077,8.71e-34,35;UBERON:0000065,1.12e-31,41;UBERON:0000153,4.86e-30,43;UBERON:0002193,1.17e-26,48;UBERON:0002405,1.17e-26,48;UBERON:0002390,1.35e-25,45;UBERON:0003061,1.35e-25,45;UBERON:0003929,2.25e-20,55;UBERON:0002530,8.79e-19,65;UBERON:0002368,2.06e-18,60;UBERON:0005911,1.63e-17,69;UBERON:0000490,1.89e-16,66;UBERON:0001041,2.16e-16,80;UBERON:0000949,8.20e-15,72;UBERON:0003081,1.06e-11,87;UBERON:0004921,1.79e-10,114;UBERON:0001007,3.13e-10,116;UBERON:0001555,3.13e-10,116;UBERON:0007026,3.13e-10,116;UBERON:0004119,5.35e-10,118;UBERON:0000925,5.35e-10,118;UBERON:0006595,5.35e-10,118;UBERON:0001048,2.22e-08,134;UBERON:0000926,1.40e-07,120;UBERON:0004120,1.40e-07,120;UBERON:0006603,1.40e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,10.0716192284429,7.03943610758334,9.83071010552373,1.54096171402954,2.23362045186942,17.6336751829142,23.6035086531293,0,0.809901069559304,0,0.630924330716475,0.685572168028694,0.42438965179803,0.850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,13.7818806982155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.324275238183423,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,1.50755631697634,0,0.195133647857799,0.472905432318573,0,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.565105371014073,0.820165366326151,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,46.7696458529704,0,0,1.55904987573354,9.84646826171148,27.6167083145958,27.164171591513,31.4578692881849,37.0546871309702,31.0923771152399,46.6825237183572,46.3899512321222,46.1816839873581,45.815745655175,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0,0,0.355905054372522,0,0,0,0,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p2@Cd4 | |||
}} |
Revision as of 03:34, 5 August 2015
Short description: | p2@Cd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 17bp_to_ENSMUST00000151594_5end |
EntrezGene: | 12504 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data