FFCP PHASE1:Mm9::chr7:5003165..5003203,+: Difference between revisions
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{{FFCP|EntrezGene=68992|HGNC=|MCL_coexpression_id=398|UniProt=Q9DB38|association_with_transcript=31bp_to_ENSMUST00000069324,NM_026900,uc009ezp.2_5end|description=CAGE_peak_2_at_Zfp580_5end|id=chr7:5003165..5003203,+|ontology_enrichment_celltype=CL:0000221!4.81e-16!44;CL:0000133!4.81e-16!44;CL:0002319!1.60e-15!43;CL:0000540!2.05e-14!33;CL:0000047!2.05e-14!33;CL:0000031!2.05e-14!33;CL:0000404!2.05e-14!33;CL:0000055!1.87e-12!50;CL:0000393!5.63e-12!39;CL:0000211!5.63e-12!39;CL:0000117!1.06e-10!23;CL:0000337!1.06e-10!23|ontology_enrichment_celltype_v019_2=CL:0000221,3.88e-16,44;CL:0000133,3.88e-16,44;CL:0002319,1.30e-15,43;CL:0000540,1.69e-14,33;CL:0000047,1.69e-14,33;CL:0000031,1.69e-14,33;CL:0000404,1.69e-14,33;CL:0000393,4.83e-12,39;CL:0000211,4.83e-12,39;CL:0000117,9.26e-11,23;CL:0000337,9.26e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.26e-25!73;UBERON:0005743!9.26e-25!73;UBERON:0000073!9.50e-24!75;UBERON:0001016!9.50e-24!75;UBERON:0004121!3.12e-22!102;UBERON:0000924!3.12e-22!102;UBERON:0006601!3.12e-22!102;UBERON:0002346!1.68e-19!71;UBERON:0003075!1.68e-19!71;UBERON:0007284!1.68e-19!71;UBERON:0001049!2.30e-17!52;UBERON:0005068!2.30e-17!52;UBERON:0006241!2.30e-17!52;UBERON:0007135!2.30e-17!52;UBERON:0000033!7.11e-17!63;UBERON:0003056!6.17e-16!49;UBERON:0000955!3.93e-14!50;UBERON:0006238!3.93e-14!50;UBERON:0002020!6.02e-14!34;UBERON:0002780!1.19e-13!39;UBERON:0001890!1.19e-13!39;UBERON:0006240!1.19e-13!39;UBERON:0002616!1.20e-13!49;UBERON:0003080!2.18e-13!40;UBERON:0000153!4.07e-11!94;UBERON:0002791!8.52e-11!29;UBERON:0003528!8.52e-11!29;UBERON:0001893!8.52e-11!29;UBERON:0007811!3.29e-10!86;UBERON:0000956!2.49e-08!21;UBERON:0001869!2.49e-08!21;UBERON:0000203!2.49e-08!21;UBERON:0000468!4.46e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.57e-25,73;UBERON:0001016,6.84e-24,75;UBERON:0004121,1.89e-23,95;UBERON:0000924,1.89e-23,95;UBERON:0006601,1.89e-23,95;UBERON:0002346,3.04e-21,64;UBERON:0003075,3.04e-21,64;UBERON:0007284,3.04e-21,64;UBERON:0010371,1.59e-19,73;UBERON:0010314,1.17e-17,92;UBERON:0001049,1.82e-17,52;UBERON:0005068,1.82e-17,52;UBERON:0006241,1.82e-17,52;UBERON:0007135,1.82e-17,52;UBERON:0000073,7.14e-17,54;UBERON:0003056,4.98e-16,49;UBERON:0000955,8.00e-15,47;UBERON:0006238,8.00e-15,47;UBERON:0002616,2.52e-14,46;UBERON:0002020,5.01e-14,34;UBERON:0002780,9.96e-14,39;UBERON:0001890,9.96e-14,39;UBERON:0006240,9.96e-14,39;UBERON:0003080,1.83e-13,40;UBERON:0003528,7.43e-11,29;UBERON:0002791,7.43e-11,29;UBERON:0001893,7.43e-11,29;UBERON:0000956,2.25e-08,21;UBERON:0001869,2.25e-08,21;UBERON:0000203,2.25e-08,21|phase1_expression=12.4916100741739,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.70219357896598,0.34243593645101,0.717949430958028,0.342401459862411,0.34968160967599,0,0,1.39912375625629,0.788655413395594,0.548457734422955,0,4.25216450755349,5.06383851124515,2.61199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0.485510353031154,2.01434908760924,3.64956952390252,4.77221555620372,16.4302182313088,9.15705656797875,10.3252505885202,6.41618666945135,3.3596741190087,8.62515386189829,0.335565212115473,0,1.68046899571232,3.34437266846731,4.01146815914259,3.09403255366465,34.5961148069912,25.3915670050576,24.719424736741,5.08266798103698,2.66788438833342,2.2497492932035,1.97773272513395,2.1314403448383,10.1864037576258,24.5899715405795,17.6272340924412,15.3906769698127,17.8776217148675,24.5659846587271,20.0990372265968,16.7812394924487,13.4183659425531,15.6267193723704,2.20231761998777,5.36286819957788,5.52983519722476,31.1251639043257,25.0676143470602,26.5665818983948,5.30447698102624,6.19038871034848,8.40390362772456,20.9186295686304,24.6303007782448,30.5695091153493,2.42323818666189,2.87171928405785,2.31891590961342,0,0,0,0.649776417447669,0,1.26399978118577,5.11290967734173,3.63700406444016,2.47337702157238,12.9575946194546,3.84979432242953,12.7402619853323,14.2213340630666,0.432982082022428,0.506719730950197,0,2.2836775943812,1.03575153458869,2.22663208597237,6.7659277438793,5.1759131313064,3.92046345335299,2.26083960828934,5.87943535678524,3.26733137457156,1.73036477414062,2.74738778147832,1.76922110389975,8.7354098971601,1.98757366614354,3.39412677194655,0,4.68449275218475,7.95897485891129,1.02182822083437,1.67741174308288,1.19980546198682,1.14363204365758,4.19413790333504,4.57500602818627,28.6491922817331,9.90798625095976,9.2057564638919,6.85700547046548,5.67844420737152,15.4795833052481,2.61254638281195,1.0108910337347,1.47309299120532,9.36867189331467,12.8745178482745,13.3245976055958,9.34369870581433,14.4917743192328,10.6334387836425,15.7418897260344,6.20888089773638,8.40715172438085,7.75334928688059,8.44565395986955,12.2749610159442,5.28289773528636,8.00979983000983,3.90986059175093,8.16040493955822,0.702213187313235,1.02939162845886,0.568326998791185,5.38527008592305,3.04883877975425,5.22179978236943,4.734894711704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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68992 | |||
|HGNC= | |||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9DB38 | |||
|association_with_transcript=31bp_to_ENSMUST00000069324,NM_026900,uc009ezp.2_5end | |||
|cluster_id=chr7:5003165..5003203,+ | |||
|description=CAGE_peak_2_at_Zfp580_5end | |||
|id=chr7:5003165..5003203,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.81e-16!44;CL:0000133!4.81e-16!44;CL:0002319!1.60e-15!43;CL:0000540!2.05e-14!33;CL:0000047!2.05e-14!33;CL:0000031!2.05e-14!33;CL:0000404!2.05e-14!33;CL:0000055!1.87e-12!50;CL:0000393!5.63e-12!39;CL:0000211!5.63e-12!39;CL:0000117!1.06e-10!23;CL:0000337!1.06e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.88e-16,44;CL:0000133,3.88e-16,44;CL:0002319,1.30e-15,43;CL:0000540,1.69e-14,33;CL:0000047,1.69e-14,33;CL:0000031,1.69e-14,33;CL:0000404,1.69e-14,33;CL:0000393,4.83e-12,39;CL:0000211,4.83e-12,39;CL:0000117,9.26e-11,23;CL:0000337,9.26e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.26e-25!73;UBERON:0005743!9.26e-25!73;UBERON:0000073!9.50e-24!75;UBERON:0001016!9.50e-24!75;UBERON:0004121!3.12e-22!102;UBERON:0000924!3.12e-22!102;UBERON:0006601!3.12e-22!102;UBERON:0002346!1.68e-19!71;UBERON:0003075!1.68e-19!71;UBERON:0007284!1.68e-19!71;UBERON:0001049!2.30e-17!52;UBERON:0005068!2.30e-17!52;UBERON:0006241!2.30e-17!52;UBERON:0007135!2.30e-17!52;UBERON:0000033!7.11e-17!63;UBERON:0003056!6.17e-16!49;UBERON:0000955!3.93e-14!50;UBERON:0006238!3.93e-14!50;UBERON:0002020!6.02e-14!34;UBERON:0002780!1.19e-13!39;UBERON:0001890!1.19e-13!39;UBERON:0006240!1.19e-13!39;UBERON:0002616!1.20e-13!49;UBERON:0003080!2.18e-13!40;UBERON:0000153!4.07e-11!94;UBERON:0002791!8.52e-11!29;UBERON:0003528!8.52e-11!29;UBERON:0001893!8.52e-11!29;UBERON:0007811!3.29e-10!86;UBERON:0000956!2.49e-08!21;UBERON:0001869!2.49e-08!21;UBERON:0000203!2.49e-08!21;UBERON:0000468!4.46e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.57e-25,73;UBERON:0001016,6.84e-24,75;UBERON:0004121,1.89e-23,95;UBERON:0000924,1.89e-23,95;UBERON:0006601,1.89e-23,95;UBERON:0002346,3.04e-21,64;UBERON:0003075,3.04e-21,64;UBERON:0007284,3.04e-21,64;UBERON:0010371,1.59e-19,73;UBERON:0010314,1.17e-17,92;UBERON:0001049,1.82e-17,52;UBERON:0005068,1.82e-17,52;UBERON:0006241,1.82e-17,52;UBERON:0007135,1.82e-17,52;UBERON:0000073,7.14e-17,54;UBERON:0003056,4.98e-16,49;UBERON:0000955,8.00e-15,47;UBERON:0006238,8.00e-15,47;UBERON:0002616,2.52e-14,46;UBERON:0002020,5.01e-14,34;UBERON:0002780,9.96e-14,39;UBERON:0001890,9.96e-14,39;UBERON:0006240,9.96e-14,39;UBERON:0003080,1.83e-13,40;UBERON:0003528,7.43e-11,29;UBERON:0002791,7.43e-11,29;UBERON:0001893,7.43e-11,29;UBERON:0000956,2.25e-08,21;UBERON:0001869,2.25e-08,21;UBERON:0000203,2.25e-08,21 | |||
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| |||
|short_description=p2@Zfp580 | |||
}} |
Revision as of 05:10, 5 August 2015
Short description: | p2@Zfp580 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp580_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | 31bp_to_ENSMUST00000069324, NM_026900, uc009ezp.2_5end |
EntrezGene: | 68992 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.88e-16 | 44 |
neurectodermal cell | 3.88e-16 | 44 |
neural cell | 1.30e-15 | 43 |
neuron | 1.69e-14 | 33 |
neuronal stem cell | 1.69e-14 | 33 |
neuroblast | 1.69e-14 | 33 |
electrically signaling cell | 1.69e-14 | 33 |
electrically responsive cell | 4.83e-12 | 39 |
electrically active cell | 4.83e-12 | 39 |
CNS neuron (sensu Vertebrata) | 9.26e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.26e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.57e-25 | 73 |
nervous system | 6.84e-24 | 75 |
ectoderm-derived structure | 1.89e-23 | 95 |
ectoderm | 1.89e-23 | 95 |
presumptive ectoderm | 1.89e-23 | 95 |
neurectoderm | 3.04e-21 | 64 |
neural plate | 3.04e-21 | 64 |
presumptive neural plate | 3.04e-21 | 64 |
ecto-epithelium | 1.59e-19 | 73 |
structure with developmental contribution from neural crest | 1.17e-17 | 92 |
neural tube | 1.82e-17 | 52 |
neural rod | 1.82e-17 | 52 |
future spinal cord | 1.82e-17 | 52 |
neural keel | 1.82e-17 | 52 |
regional part of nervous system | 7.14e-17 | 54 |
pre-chordal neural plate | 4.98e-16 | 49 |
brain | 8.00e-15 | 47 |
future brain | 8.00e-15 | 47 |
regional part of brain | 2.52e-14 | 46 |
gray matter | 5.01e-14 | 34 |
regional part of forebrain | 9.96e-14 | 39 |
forebrain | 9.96e-14 | 39 |
future forebrain | 9.96e-14 | 39 |
anterior neural tube | 1.83e-13 | 40 |
brain grey matter | 7.43e-11 | 29 |
regional part of telencephalon | 7.43e-11 | 29 |
telencephalon | 7.43e-11 | 29 |
cerebral cortex | 2.25e-08 | 21 |
cerebral hemisphere | 2.25e-08 | 21 |
pallium | 2.25e-08 | 21 |