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FFCP PHASE1:Mm9::chr11:120434229..120434235,-: Difference between revisions

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{{FFCP|EntrezGene=18453|HGNC=|UniProt=P09103|association_with_transcript=14bp_to_NM_011032,uc007mti.1_5end|description=CAGE_peak_4_at_P4hb_5end|id=chr11:120434229..120434235,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.40e-13!52;UBERON:0005068!2.40e-13!52;UBERON:0006241!2.40e-13!52;UBERON:0007135!2.40e-13!52;UBERON:0007811!4.95e-13!86;UBERON:0002780!5.67e-13!39;UBERON:0001890!5.67e-13!39;UBERON:0006240!5.67e-13!39;UBERON:0003056!7.79e-13!49;UBERON:0003080!1.13e-12!40;UBERON:0002616!1.33e-12!49;UBERON:0000073!2.03e-12!75;UBERON:0001016!2.03e-12!75;UBERON:0001017!3.02e-12!73;UBERON:0005743!3.02e-12!73;UBERON:0000955!3.25e-12!50;UBERON:0006238!3.25e-12!50;UBERON:0000033!7.70e-12!63;UBERON:0002346!1.10e-11!71;UBERON:0003075!1.10e-11!71;UBERON:0007284!1.10e-11!71;UBERON:0000153!1.55e-11!94;UBERON:0004121!3.83e-11!102;UBERON:0000924!3.83e-11!102;UBERON:0006601!3.83e-11!102;UBERON:0002020!4.48e-10!34;UBERON:0002791!1.11e-09!29;UBERON:0003528!1.11e-09!29;UBERON:0001893!1.11e-09!29;UBERON:0000956!8.94e-08!21;UBERON:0001869!8.94e-08!21;UBERON:0000203!8.94e-08!21;UBERON:0000475!2.71e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.16e-14,73;UBERON:0001049,2.71e-14,52;UBERON:0005068,2.71e-14,52;UBERON:0006241,2.71e-14,52;UBERON:0007135,2.71e-14,52;UBERON:0000073,4.26e-14,54;UBERON:0002346,6.96e-14,64;UBERON:0003075,6.96e-14,64;UBERON:0007284,6.96e-14,64;UBERON:0002780,1.24e-13,39;UBERON:0001890,1.24e-13,39;UBERON:0006240,1.24e-13,39;UBERON:0003080,2.57e-13,40;UBERON:0003056,3.25e-13,49;UBERON:0002616,3.65e-13,46;UBERON:0001016,1.37e-12,75;UBERON:0000955,2.01e-12,47;UBERON:0006238,2.01e-12,47;UBERON:0001017,2.08e-12,73;UBERON:0004121,3.98e-12,95;UBERON:0000924,3.98e-12,95;UBERON:0006601,3.98e-12,95;UBERON:0002020,1.44e-10,34;UBERON:0003528,3.78e-10,29;UBERON:0002791,3.78e-10,29;UBERON:0001893,3.78e-10,29;UBERON:0010314,2.27e-08,92;UBERON:0000956,3.89e-08,21;UBERON:0001869,3.89e-08,21;UBERON:0000203,3.89e-08,21;UBERON:0000483,6.95e-08,174;UBERON:0000119,2.36e-07,176|phase1_expression=3.20297694209588,0,0,0,0.500895729946347,0.503637815735669,0,3.61545305636414,0.84473233291,0.936258105287974,1.71217968225505,2.95156988282745,2.39681021903688,4.10875891369288,1.33243904726265,0.404950534779652,0.699561878128147,1.10411757875383,2.33094537129756,1.27316895539409,1.53077922271926,1.68794617041505,0.261199789138935,0,0.22940928106717,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,0.756090389279792,0.665191531965914,0,1.84519436275371,0,1.73310971850765,1.32987716286794,0.816677425049476,3.34825304589526,3.1253413780952,2.09409497589519,1.17646297606203,1.36609096991689,1.45653105909346,0.755380907853464,1.4192770370732,0.367093504323363,0,1.52617609466313,2.19686182734472,1.55543919259427,1.39986421625363,2.87505128729943,1.17447824240415,3.62681071005672,2.01656279485478,1.28629718017973,0.85960031981627,0.515672092277442,2.22548106945558,2.64495489636016,2.53532561402472,0.677689064138264,0,1.7997994345628,1.97773272513395,1.4209602298922,1.79760066311043,0.384218305321555,2.07379224616955,3.24014251996058,2.73422449756797,1.71390590642282,1.54607978666129,1.5923803897944,2.01275489138296,4.5960939330501,2.20231761998777,1.40456071893706,1.68967186581868,1.58263545276233,1.64677758484337,3.12548022334056,2.23346399201105,2.25105044012672,1.06958773443767,2.06240009831567,1.13897344639282,2.60959224155421,1.66597625333005,1.51143120213571,2.31891590961342,0.860423876981386,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0.35333957451034,1.26759077799012,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.22836775943812,1.03575153458869,0.890652834388949,1.21439728736295,1.21786191324856,0.922461989024234,0.753613202763113,1.05829836422134,1.63366568728578,0.741584903203122,1.44599356919912,0,1.45590164952668,1.98757366614354,1.45462575940567,0,1.75668478206928,1.8850203613211,0.255457055208591,2.39630249011841,2.39961092397363,1.39777249780371,1.19832511523858,3.66000482254901,3.76963056338593,3.12883776346098,3.58001640262463,1.24672826735736,3.89379031362618,2.95334155165917,2.11491850037158,2.77995034277042,1.26265113531884,1.56144531555244,0.919608417733892,1.62055916824814,1.20563854268572,1.90502197623718,1.66547836370305,2.43624483855295,2.32833033665114,0.431135985865684,1.13463648100692,1.40760899331159,1.31517439456545,1.11218899690239,0.696504333044333,1.4404749548556,1.39323986772945,0.702213187313235,1.28673953557358,1.98914449576915,0.414251545071004,0.469052119962192,1.08037236876609,1.18372367792605,1.18058539048442,0.771335564436891,0.930135779001631,1.60964040839772,1.40118410840603,1.48103864922132,1.31333971263276,2.35099547682982,1.16959989940266,1.53685080703735,0.671032093801859,1.47202963994889,1.74937841044784,0,0.793351699990633,0.853153002140936,1.16118335930219,0.902072229254653,0.605050573870028,1.7790243507589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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:18453
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:P09103
|association_with_transcript=14bp_to_NM_011032,uc007mti.1_5end
|cluster_id=chr11:120434229..120434235,-
|description=CAGE_peak_4_at_P4hb_5end
|id=chr11:120434229..120434235,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.40e-13!52;UBERON:0005068!2.40e-13!52;UBERON:0006241!2.40e-13!52;UBERON:0007135!2.40e-13!52;UBERON:0007811!4.95e-13!86;UBERON:0002780!5.67e-13!39;UBERON:0001890!5.67e-13!39;UBERON:0006240!5.67e-13!39;UBERON:0003056!7.79e-13!49;UBERON:0003080!1.13e-12!40;UBERON:0002616!1.33e-12!49;UBERON:0000073!2.03e-12!75;UBERON:0001016!2.03e-12!75;UBERON:0001017!3.02e-12!73;UBERON:0005743!3.02e-12!73;UBERON:0000955!3.25e-12!50;UBERON:0006238!3.25e-12!50;UBERON:0000033!7.70e-12!63;UBERON:0002346!1.10e-11!71;UBERON:0003075!1.10e-11!71;UBERON:0007284!1.10e-11!71;UBERON:0000153!1.55e-11!94;UBERON:0004121!3.83e-11!102;UBERON:0000924!3.83e-11!102;UBERON:0006601!3.83e-11!102;UBERON:0002020!4.48e-10!34;UBERON:0002791!1.11e-09!29;UBERON:0003528!1.11e-09!29;UBERON:0001893!1.11e-09!29;UBERON:0000956!8.94e-08!21;UBERON:0001869!8.94e-08!21;UBERON:0000203!8.94e-08!21;UBERON:0000475!2.71e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.16e-14,73;UBERON:0001049,2.71e-14,52;UBERON:0005068,2.71e-14,52;UBERON:0006241,2.71e-14,52;UBERON:0007135,2.71e-14,52;UBERON:0000073,4.26e-14,54;UBERON:0002346,6.96e-14,64;UBERON:0003075,6.96e-14,64;UBERON:0007284,6.96e-14,64;UBERON:0002780,1.24e-13,39;UBERON:0001890,1.24e-13,39;UBERON:0006240,1.24e-13,39;UBERON:0003080,2.57e-13,40;UBERON:0003056,3.25e-13,49;UBERON:0002616,3.65e-13,46;UBERON:0001016,1.37e-12,75;UBERON:0000955,2.01e-12,47;UBERON:0006238,2.01e-12,47;UBERON:0001017,2.08e-12,73;UBERON:0004121,3.98e-12,95;UBERON:0000924,3.98e-12,95;UBERON:0006601,3.98e-12,95;UBERON:0002020,1.44e-10,34;UBERON:0003528,3.78e-10,29;UBERON:0002791,3.78e-10,29;UBERON:0001893,3.78e-10,29;UBERON:0010314,2.27e-08,92;UBERON:0000956,3.89e-08,21;UBERON:0001869,3.89e-08,21;UBERON:0000203,3.89e-08,21;UBERON:0000483,6.95e-08,174;UBERON:0000119,2.36e-07,176
|phase1_expression=3.20297694209588,0,0,0,0.500895729946347,0.503637815735669,0,3.61545305636414,0.84473233291,0.936258105287974,1.71217968225505,2.95156988282745,2.39681021903688,4.10875891369288,1.33243904726265,0.404950534779652,0.699561878128147,1.10411757875383,2.33094537129756,1.27316895539409,1.53077922271926,1.68794617041505,0.261199789138935,0,0.22940928106717,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,0.756090389279792,0.665191531965914,0,1.84519436275371,0,1.73310971850765,1.32987716286794,0.816677425049476,3.34825304589526,3.1253413780952,2.09409497589519,1.17646297606203,1.36609096991689,1.45653105909346,0.755380907853464,1.4192770370732,0.367093504323363,0,1.52617609466313,2.19686182734472,1.55543919259427,1.39986421625363,2.87505128729943,1.17447824240415,3.62681071005672,2.01656279485478,1.28629718017973,0.85960031981627,0.515672092277442,2.22548106945558,2.64495489636016,2.53532561402472,0.677689064138264,0,1.7997994345628,1.97773272513395,1.4209602298922,1.79760066311043,0.384218305321555,2.07379224616955,3.24014251996058,2.73422449756797,1.71390590642282,1.54607978666129,1.5923803897944,2.01275489138296,4.5960939330501,2.20231761998777,1.40456071893706,1.68967186581868,1.58263545276233,1.64677758484337,3.12548022334056,2.23346399201105,2.25105044012672,1.06958773443767,2.06240009831567,1.13897344639282,2.60959224155421,1.66597625333005,1.51143120213571,2.31891590961342,0.860423876981386,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0.35333957451034,1.26759077799012,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.22836775943812,1.03575153458869,0.890652834388949,1.21439728736295,1.21786191324856,0.922461989024234,0.753613202763113,1.05829836422134,1.63366568728578,0.741584903203122,1.44599356919912,0,1.45590164952668,1.98757366614354,1.45462575940567,0,1.75668478206928,1.8850203613211,0.255457055208591,2.39630249011841,2.39961092397363,1.39777249780371,1.19832511523858,3.66000482254901,3.76963056338593,3.12883776346098,3.58001640262463,1.24672826735736,3.89379031362618,2.95334155165917,2.11491850037158,2.77995034277042,1.26265113531884,1.56144531555244,0.919608417733892,1.62055916824814,1.20563854268572,1.90502197623718,1.66547836370305,2.43624483855295,2.32833033665114,0.431135985865684,1.13463648100692,1.40760899331159,1.31517439456545,1.11218899690239,0.696504333044333,1.4404749548556,1.39323986772945,0.702213187313235,1.28673953557358,1.98914449576915,0.414251545071004,0.469052119962192,1.08037236876609,1.18372367792605,1.18058539048442,0.771335564436891,0.930135779001631,1.60964040839772,1.40118410840603,1.48103864922132,1.31333971263276,2.35099547682982,1.16959989940266,1.53685080703735,0.671032093801859,1.47202963994889,1.74937841044784,0,0.793351699990633,0.853153002140936,1.16118335930219,0.902072229254653,0.605050573870028,1.77902435075896,0.760902504450237,1.42358718463353,0.329397909448022,1.00534083520108,0.198956472041151,0.38992817423824,0,0.648414149624083,0.995706366271836,2.46568271239006,0.571242563048644,1.1270773567308,1.62921062276251,1.74557238450863,1.26244475802573,2.15004226222475,1.32849133181642,0.784993639206874,0.987177311374404,0,1.00107063429656,0.196558995113203,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0,0.538192240565737,0.964887042726734,1.84753190166605,1.89491411770485,1.46668478797823,1.52770577197669,2.11221223459652,0.837531287209079,1.19021820443007,2.73187107000918,2.99506773801763,3.76489972402917,2.55127629851979,2.29408640602033,2.59027472798843,2.4590339958857,1.50791283939272,0,0.491764273019036,0.551873492609465,1.76605648986571,1.87538698547525,0.491804836130026,2.01976741763498,2.2085575359138,1.17131623288992,0.646270193198397,0.477937595905104,0.891194696329576,0.566153061577665,0.809621403349789,0.584511715822624,1.97643888973262,0.963963949265421,1.27746076687442,1.24645922567079,2.76907830901079,2.3095817216155,0,1.21390318077491,1.209294227859,0.943025398779491,1.18120757152309,0.307435147943927,1.55056975900933,1.45413491791002,2.49548164869305,0,0,1.03135543248187,4.08527526904546,1.62054984628179,3.36332577835162,2.7863814554107,1.59606210278046,2.14042581122485,2.30368628842969,3.95804433848979,0.704015124191131,1.69465656691056,1.10264199027481,1.48397627647332,2.09903754704677,2.41251699712623,2.26807453605959,2.79039529566604,1.1659233465194,2.96680483216816,0.854354403989263,1.65109494370578,0.555583582109135,0.941842285023455,0.136694227721025,0.228778173206523,1.86976272993241,1.6794174278839,1.93479963326193,0.954670618015114,0.949007980743406,1.82987520414164,0.756037385752609,0.627264888043406,1.52853794622324,1.34864346384821,1.65306911450672,1.30877970992015,0.518459893167171,0,0.56369293868419,1.79419855252775,2.15096037594227,2.52786544847262,2.32487682259916,2.70329800785245,2.69921648885234,1.8228613878153,2.83120229949419,2.17425708743405,2.30424005006292,2.52808896502543,2.63542779877213,1.33524244314275,0.649604114888975,1.07416017400489,1.78813219303138,2.88469078847925,1.9199638532695,3.12995994839258,2.66723823292499,2.52065462842101,1.94915761479505,1.6356013078856,1.28564592399726,0.906921534460845,0.887943813496259,0.358855426437903,0.335769232728157,1.35232715822533,0.563047426353546,1.46521299413812,1.07184189539533,0.501572104035363,3.95326289831947,1.38097570952153,4.58316410751517,2.749650917499,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,5.43770890781046,4.14208249401456,0.415149390336707,0.798049746802062,1.19513524027894,0.486213434136588,0,0.183843508450014,0.888986911206461,0.618105171716683,0,0.505394423527595,1.52087579934144,0.565879024158229,1.12369808963859,0.960377286073039,1.03383844120104,2.85776214769844,1.15884325944855,0.38581844092741,0,1.03039244094078,1.37147700954166,0.532427418478012,0.476872379894642,1.0174249164263,1.41164070622996,0.761531471025089,0.914639864363863,0.263069711437843,0.679020569229309,0,1.66089025373844,1.18205378850676,1.22769312950907,0.929621047115796,2.12197272079256,1.24905288968973,0.467863216890817,2.14871054048298,1.3390183244819,0.441182838239031,1.85494268496337
|short_description=p4@P4hb
}}

Revision as of 15:07, 5 August 2015

Short description:p4@P4hb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_P4hb_5end
Coexpression cluster:NA
Association with transcript: 14bp_to_NM_011032, uc007mti.1_5end
EntrezGene:18453
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@P4hb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.16e-1473
neural tube2.71e-1452
neural rod2.71e-1452
future spinal cord2.71e-1452
neural keel2.71e-1452
regional part of nervous system4.26e-1454
neurectoderm6.96e-1464
neural plate6.96e-1464
presumptive neural plate6.96e-1464
regional part of forebrain1.24e-1339
forebrain1.24e-1339
future forebrain1.24e-1339
anterior neural tube2.57e-1340
pre-chordal neural plate3.25e-1349
regional part of brain3.65e-1346
nervous system1.37e-1275
brain2.01e-1247
future brain2.01e-1247
central nervous system2.08e-1273
ectoderm-derived structure3.98e-1295
ectoderm3.98e-1295
presumptive ectoderm3.98e-1295
gray matter1.44e-1034
brain grey matter3.78e-1029
regional part of telencephalon3.78e-1029
telencephalon3.78e-1029
structure with developmental contribution from neural crest2.27e-0892
cerebral cortex3.89e-0821
cerebral hemisphere3.89e-0821
pallium3.89e-0821
epithelium6.95e-08174
cell layer2.36e-07176
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