FFCP PHASE1:Mm9::chr6:42643029..42643069,-: Difference between revisions
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{{FFCP|EntrezGene=77574|HGNC=|MCL_coexpression_id=3563|UniProt=Q8BNE1|association_with_transcript=0bp_to_ENSMUST00000045140,NM_029930,uc009bro.1,uc009brs.1,uc009brt.1_5end|description=CAGE_peak_2_at_Fam115a_5end|id=chr6:42643029..42643069,-|ontology_enrichment_celltype=CL:0000540!2.06e-15!33;CL:0000047!2.06e-15!33;CL:0000031!2.06e-15!33;CL:0000404!2.06e-15!33;CL:0000393!4.76e-14!39;CL:0000211!4.76e-14!39;CL:0000221!1.18e-11!44;CL:0000133!1.18e-11!44;CL:0002319!3.21e-11!43;CL:0000055!3.79e-10!50;CL:0000117!1.01e-09!23;CL:0000337!1.01e-09!23;CL:0000107!6.98e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.00e-15,33;CL:0000047,2.00e-15,33;CL:0000031,2.00e-15,33;CL:0000404,2.00e-15,33;CL:0000393,4.63e-14,39;CL:0000211,4.63e-14,39;CL:0000221,1.15e-11,44;CL:0000133,1.15e-11,44;CL:0002319,3.14e-11,43;CL:0000117,9.95e-10,23;CL:0000337,9.95e-10,23;CL:0000107,6.90e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.57e-25!102;UBERON:0000924!2.57e-25!102;UBERON:0006601!2.57e-25!102;UBERON:0001017!2.04e-24!73;UBERON:0005743!2.04e-24!73;UBERON:0000073!3.11e-24!75;UBERON:0001016!3.11e-24!75;UBERON:0002346!9.22e-24!71;UBERON:0003075!9.22e-24!71;UBERON:0007284!9.22e-24!71;UBERON:0000033!1.87e-19!63;UBERON:0003056!3.74e-18!49;UBERON:0001049!3.92e-18!52;UBERON:0005068!3.92e-18!52;UBERON:0006241!3.92e-18!52;UBERON:0007135!3.92e-18!52;UBERON:0000955!5.53e-16!50;UBERON:0006238!5.53e-16!50;UBERON:0002616!1.97e-15!49;UBERON:0003080!8.40e-15!40;UBERON:0002780!2.11e-14!39;UBERON:0001890!2.11e-14!39;UBERON:0006240!2.11e-14!39;UBERON:0002020!3.86e-13!34;UBERON:0002791!7.01e-11!29;UBERON:0003528!7.01e-11!29;UBERON:0001893!7.01e-11!29;UBERON:0000468!1.77e-10!333;UBERON:0004111!3.39e-10!122;UBERON:0000025!2.69e-09!114;UBERON:0000922!2.50e-08!328;UBERON:0000956!5.09e-08!21;UBERON:0001869!5.09e-08!21;UBERON:0000203!5.09e-08!21;UBERON:0002410!6.98e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.08e-25,95;UBERON:0000924,6.08e-25,95;UBERON:0006601,6.08e-25,95;UBERON:0001017,1.93e-24,73;UBERON:0001016,2.95e-24,75;UBERON:0002346,6.40e-24,64;UBERON:0003075,6.40e-24,64;UBERON:0007284,6.40e-24,64;UBERON:0010371,6.06e-22,73;UBERON:0010314,2.58e-21,92;UBERON:0003056,3.60e-18,49;UBERON:0001049,3.77e-18,52;UBERON:0005068,3.77e-18,52;UBERON:0006241,3.77e-18,52;UBERON:0007135,3.77e-18,52;UBERON:0000073,7.70e-18,54;UBERON:0000955,4.48e-16,47;UBERON:0006238,4.48e-16,47;UBERON:0002616,1.61e-15,46;UBERON:0003080,8.15e-15,40;UBERON:0002780,2.05e-14,39;UBERON:0001890,2.05e-14,39;UBERON:0006240,2.05e-14,39;UBERON:0002020,3.76e-13,34;UBERON:0003528,6.86e-11,29;UBERON:0002791,6.86e-11,29;UBERON:0001893,6.86e-11,29;UBERON:0004111,3.32e-10,122;UBERON:0000025,2.65e-09,114;UBERON:0000922,3.08e-09,320;UBERON:0000956,5.01e-08,21;UBERON:0001869,5.01e-08,21;UBERON:0000203,5.01e-08,21;UBERON:0002410,6.90e-07,9|phase1_expression=27.8658993962341,2.09385244583617,1.81999695755814,0.30246421130683,0.500895729946347,3.86122325397347,4.67225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,11.1406710097901,0.198581902401771,0,7.83962871687693,5.73523202667925,1.72269589234506,0.86152399231815,2.15471232685889,1.71021077510736,2.01624103807945,3.76941868114018,0,0,0,10.1098066912946,8.81043620400009,7.9626048942324,0,0,0,0,0,0,23.9203954153597,25.3442328048786,24.0446245331803,7.82391344348039,15.0437357902508,12.0827400503959,21.7761486963197,13.9986421625363,10.062679505548,0,0,0,19.8089765747679,12.6074713573053,14.4388185837684,41.4748744762175,52.3701069479313,31.691570175309,14.5703148789727,16.0073063300005,2.6996991518442,3.9554654502679,4.2628806896766,11.085204089181,10.373894243682,43.9643956187945,38.6116983628635,42.6959671543305,33.1355141908412,25.8416192913388,44.7091417134582,45.0473713785711,42.284064184061,20.9220173898839,20.5576614317152,27.4955694528676,56.5792174362532,53.7032467946145,50.007683573449,18.9844439320939,23.6360296213306,28.7260705820403,42.7211448936818,44.4199644093201,48.0910570229276,13.176357639974,27.4324763187631,24.0587525622393,7.74381489283248,5.439770669662,1.61910957491345,3.24888208723835,2.68816132258401,6.31999890592883,27.0984212899112,16.6263042945836,19.7870161725791,36.7601325617136,15.3991772897181,10.1922095882658,7.11066703153331,16.8863011988747,17.988550448732,13.1436355703844,6.50848114398642,3.10725460376606,24.3445108066313,23.9409750937267,25.5751001782199,20.2941637585331,21.7040602395776,28.3388784197049,14.5773245942424,5.43828929015623,14.6045350489111,0.884610551949874,20.8679236432158,8.17113618303456,5.33362778448744,14.9113408974498,37.1831612204665,36.8626203991681,4.08731288333746,0.958520996047362,0.599902730993408,0.127070227073065,32.953940669061,49.8675657072303,39.5811209155523,39.631945003839,35.2887331115856,31.7915708176127,36.3420429271777,27.2929495118848,12.8139179728396,12.6361379216837,9.25944165900485,45.9325163658344,38.8534556492569,35.1121153120431,45.0607405328788,42.5228119695799,44.4554609388429,40.94765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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77574 | |||
|HGNC= | |||
|MCL_coexpression_id=3563 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BNE1 | |||
|association_with_transcript=0bp_to_ENSMUST00000045140,NM_029930,uc009bro.1,uc009brs.1,uc009brt.1_5end | |||
|cluster_id=chr6:42643029..42643069,- | |||
|description=CAGE_peak_2_at_Fam115a_5end | |||
|id=chr6:42643029..42643069,- | |||
|ontology_enrichment_celltype=CL:0000540!2.06e-15!33;CL:0000047!2.06e-15!33;CL:0000031!2.06e-15!33;CL:0000404!2.06e-15!33;CL:0000393!4.76e-14!39;CL:0000211!4.76e-14!39;CL:0000221!1.18e-11!44;CL:0000133!1.18e-11!44;CL:0002319!3.21e-11!43;CL:0000055!3.79e-10!50;CL:0000117!1.01e-09!23;CL:0000337!1.01e-09!23;CL:0000107!6.98e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.00e-15,33;CL:0000047,2.00e-15,33;CL:0000031,2.00e-15,33;CL:0000404,2.00e-15,33;CL:0000393,4.63e-14,39;CL:0000211,4.63e-14,39;CL:0000221,1.15e-11,44;CL:0000133,1.15e-11,44;CL:0002319,3.14e-11,43;CL:0000117,9.95e-10,23;CL:0000337,9.95e-10,23;CL:0000107,6.90e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.57e-25!102;UBERON:0000924!2.57e-25!102;UBERON:0006601!2.57e-25!102;UBERON:0001017!2.04e-24!73;UBERON:0005743!2.04e-24!73;UBERON:0000073!3.11e-24!75;UBERON:0001016!3.11e-24!75;UBERON:0002346!9.22e-24!71;UBERON:0003075!9.22e-24!71;UBERON:0007284!9.22e-24!71;UBERON:0000033!1.87e-19!63;UBERON:0003056!3.74e-18!49;UBERON:0001049!3.92e-18!52;UBERON:0005068!3.92e-18!52;UBERON:0006241!3.92e-18!52;UBERON:0007135!3.92e-18!52;UBERON:0000955!5.53e-16!50;UBERON:0006238!5.53e-16!50;UBERON:0002616!1.97e-15!49;UBERON:0003080!8.40e-15!40;UBERON:0002780!2.11e-14!39;UBERON:0001890!2.11e-14!39;UBERON:0006240!2.11e-14!39;UBERON:0002020!3.86e-13!34;UBERON:0002791!7.01e-11!29;UBERON:0003528!7.01e-11!29;UBERON:0001893!7.01e-11!29;UBERON:0000468!1.77e-10!333;UBERON:0004111!3.39e-10!122;UBERON:0000025!2.69e-09!114;UBERON:0000922!2.50e-08!328;UBERON:0000956!5.09e-08!21;UBERON:0001869!5.09e-08!21;UBERON:0000203!5.09e-08!21;UBERON:0002410!6.98e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.08e-25,95;UBERON:0000924,6.08e-25,95;UBERON:0006601,6.08e-25,95;UBERON:0001017,1.93e-24,73;UBERON:0001016,2.95e-24,75;UBERON:0002346,6.40e-24,64;UBERON:0003075,6.40e-24,64;UBERON:0007284,6.40e-24,64;UBERON:0010371,6.06e-22,73;UBERON:0010314,2.58e-21,92;UBERON:0003056,3.60e-18,49;UBERON:0001049,3.77e-18,52;UBERON:0005068,3.77e-18,52;UBERON:0006241,3.77e-18,52;UBERON:0007135,3.77e-18,52;UBERON:0000073,7.70e-18,54;UBERON:0000955,4.48e-16,47;UBERON:0006238,4.48e-16,47;UBERON:0002616,1.61e-15,46;UBERON:0003080,8.15e-15,40;UBERON:0002780,2.05e-14,39;UBERON:0001890,2.05e-14,39;UBERON:0006240,2.05e-14,39;UBERON:0002020,3.76e-13,34;UBERON:0003528,6.86e-11,29;UBERON:0002791,6.86e-11,29;UBERON:0001893,6.86e-11,29;UBERON:0004111,3.32e-10,122;UBERON:0000025,2.65e-09,114;UBERON:0000922,3.08e-09,320;UBERON:0000956,5.01e-08,21;UBERON:0001869,5.01e-08,21;UBERON:0000203,5.01e-08,21;UBERON:0002410,6.90e-07,9 | |||
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| |||
|short_description=p2@Fam115a | |||
}} |
Revision as of 18:49, 5 August 2015
Short description: | p2@Fam115a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam115a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3563 |
Association with transcript: | 0bp_to_ENSMUST00000045140, NM_029930, uc009bro.1, uc009brs.1, uc009brt.1_5end |
EntrezGene: | 77574 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.00e-15 | 33 |
neuronal stem cell | 2.00e-15 | 33 |
neuroblast | 2.00e-15 | 33 |
electrically signaling cell | 2.00e-15 | 33 |
electrically responsive cell | 4.63e-14 | 39 |
electrically active cell | 4.63e-14 | 39 |
ectodermal cell | 1.15e-11 | 44 |
neurectodermal cell | 1.15e-11 | 44 |
neural cell | 3.14e-11 | 43 |
CNS neuron (sensu Vertebrata) | 9.95e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.95e-10 | 23 |
autonomic neuron | 6.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.08e-25 | 95 |
ectoderm | 6.08e-25 | 95 |
presumptive ectoderm | 6.08e-25 | 95 |
central nervous system | 1.93e-24 | 73 |
nervous system | 2.95e-24 | 75 |
neurectoderm | 6.40e-24 | 64 |
neural plate | 6.40e-24 | 64 |
presumptive neural plate | 6.40e-24 | 64 |
ecto-epithelium | 6.06e-22 | 73 |
structure with developmental contribution from neural crest | 2.58e-21 | 92 |
pre-chordal neural plate | 3.60e-18 | 49 |
neural tube | 3.77e-18 | 52 |
neural rod | 3.77e-18 | 52 |
future spinal cord | 3.77e-18 | 52 |
neural keel | 3.77e-18 | 52 |
regional part of nervous system | 7.70e-18 | 54 |
brain | 4.48e-16 | 47 |
future brain | 4.48e-16 | 47 |
regional part of brain | 1.61e-15 | 46 |
anterior neural tube | 8.15e-15 | 40 |
regional part of forebrain | 2.05e-14 | 39 |
forebrain | 2.05e-14 | 39 |
future forebrain | 2.05e-14 | 39 |
gray matter | 3.76e-13 | 34 |
brain grey matter | 6.86e-11 | 29 |
regional part of telencephalon | 6.86e-11 | 29 |
telencephalon | 6.86e-11 | 29 |
anatomical conduit | 3.32e-10 | 122 |
tube | 2.65e-09 | 114 |
embryo | 3.08e-09 | 320 |
cerebral cortex | 5.01e-08 | 21 |
cerebral hemisphere | 5.01e-08 | 21 |
pallium | 5.01e-08 | 21 |
autonomic nervous system | 6.90e-07 | 9 |