FFCP PHASE1:Mm9::chr3:130814957..130814978,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=29bp_to_uc008rjh.1_5end|description=CAGE_peak_1_at_uc008rjh.1_5end|id=chr3:130814957..130814978,-|ontology_enrichment_celltype=CL:0000791!2.69e-13!9;CL:0000789!2.69e-13!9;CL:0002420!2.69e-13!9;CL:0002419!2.69e-13!9;CL:0000790!2.69e-13!9;CL:0000624!8.03e-12!8;CL:0000838!2.21e-11!12;CL:0000084!1.99e-10!11;CL:0000827!1.99e-10!11;CL:0000542!2.72e-10!13;CL:0000051!2.72e-10!13;CL:0000893!6.32e-09!6;CL:0002489!6.32e-09!6;CL:0000898!6.32e-09!6;CL:0000809!6.32e-09!6;CL:0000810!6.32e-09!6;CL:0000895!6.32e-09!6;CL:0000808!6.32e-09!6;CL:0000894!6.32e-09!6;CL:0000806!6.32e-09!6;CL:0000807!6.32e-09!6;CL:0000805!6.32e-09!6;CL:0002425!6.32e-09!6;CL:0002436!6.32e-09!6;CL:0002427!6.32e-09!6;CL:0002428!6.32e-09!6;CL:0002429!6.32e-09!6;CL:0002433!6.32e-09!6;CL:0002431!6.32e-09!6;CL:0002432!6.32e-09!6;CL:0000738!3.06e-07!17;CL:0002087!3.06e-07!17;CL:0002031!5.17e-07!25|ontology_enrichment_celltype_v019_2=CL:0000791,6.04e-22,9;CL:0000789,6.04e-22,9;CL:0002420,6.04e-22,9;CL:0002419,6.04e-22,9;CL:0000790,6.04e-22,9;CL:0000624,3.24e-18,8;CL:0000084,8.35e-18,11;CL:0000827,8.35e-18,11;CL:0000838,2.99e-16,12;CL:0000542,6.19e-15,13;CL:0000051,6.19e-15,13;CL:0000738,3.25e-11,17;CL:0002087,3.25e-11,17;CL:0000893,3.93e-11,6;CL:0002489,3.93e-11,6;CL:0000898,3.93e-11,6;CL:0000809,3.93e-11,6;CL:0000810,3.93e-11,6;CL:0000895,3.93e-11,6;CL:0000808,3.93e-11,6;CL:0000894,3.93e-11,6;CL:0000806,3.93e-11,6;CL:0000807,3.93e-11,6;CL:0000805,3.93e-11,6;CL:0002425,3.93e-11,6;CL:0002436,3.93e-11,6;CL:0002427,3.93e-11,6;CL:0002428,3.93e-11,6;CL:0002429,3.93e-11,6;CL:0002433,3.93e-11,6;CL:0002431,3.93e-11,6;CL:0002432,3.93e-11,6;CL:0002031,2.43e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.09e-22!23;UBERON:0000974!1.09e-22!23;UBERON:0004807!1.09e-22!23;UBERON:0005058!1.09e-22!23;UBERON:0003351!1.09e-22!23;UBERON:0009113!1.09e-22!23;UBERON:0003295!1.09e-22!23;UBERON:0009722!1.09e-22!23;UBERON:0005562!1.09e-22!23;UBERON:0007690!1.09e-22!23;UBERON:0006562!1.83e-21!24;UBERON:0003408!1.83e-21!24;UBERON:0001557!1.83e-21!24;UBERON:0001042!1.83e-21!24;UBERON:0008814!1.83e-21!24;UBERON:0009145!1.83e-21!24;UBERON:0004177!3.34e-20!29;UBERON:0000072!2.45e-18!27;UBERON:0002390!4.38e-14!45;UBERON:0003061!4.38e-14!45;UBERON:0002193!4.90e-14!48;UBERON:0000065!2.99e-13!41;UBERON:0001004!9.10e-13!42;UBERON:0000063!1.13e-12!35;UBERON:0005057!1.47e-08!51;UBERON:0002405!2.86e-07!70;UBERON:0007811!6.32e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.26e-40,23;UBERON:0000974,2.26e-40,23;UBERON:0004807,2.26e-40,23;UBERON:0005058,2.26e-40,23;UBERON:0003351,2.26e-40,23;UBERON:0009113,2.26e-40,23;UBERON:0003295,2.26e-40,23;UBERON:0009722,2.26e-40,23;UBERON:0005562,2.26e-40,23;UBERON:0007690,2.26e-40,23;UBERON:0006562,1.41e-38,24;UBERON:0003408,1.41e-38,24;UBERON:0001557,1.41e-38,24;UBERON:0001042,1.41e-38,24;UBERON:0008814,1.41e-38,24;UBERON:0009145,1.41e-38,24;UBERON:0000072,5.48e-34,27;UBERON:0004177,1.87e-31,29;UBERON:0005057,1.87e-31,29;UBERON:0000077,1.38e-25,35;UBERON:0007811,8.50e-25,36;UBERON:0000065,1.98e-21,41;UBERON:0001004,7.48e-21,42;UBERON:0000153,2.66e-20,43;UBERON:0002390,2.84e-19,45;UBERON:0003061,2.84e-19,45;UBERON:0002193,6.84e-18,48;UBERON:0002405,6.84e-18,48;UBERON:0003929,2.99e-15,55;UBERON:0002368,9.69e-14,60;UBERON:0002530,1.84e-12,65;UBERON:0000490,3.15e-12,66;UBERON:0005911,1.43e-11,69;UBERON:0000949,5.73e-11,72;UBERON:0001041,1.40e-09,80;UBERON:0003081,1.42e-08,87;UBERON:0000926,2.03e-08,120;UBERON:0004120,2.03e-08,120;UBERON:0006603,2.03e-08,120;UBERON:0001048,3.51e-07,134|phase1_expression=0,0,0,0,0,0,0,6.84353614240354,4.78681655315667,6.08567768437183,0.171217968225505,0.478632953972018,6.33442700745461,8.91688104673774,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,15.9579671242496,11.4271891708438,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,0.255374676170375,0.307213066512487,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0.410082683163076,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0,0,0,0,0,0,0,3.38217769156408,2.59227005632079,6.95224465381992,0.810900861160657,0.821687657318618,1.81889152168913,3.04345382634718,3.77494574084403,2.88469078847925,3.10148007066612,2.62512769865184,3.35309949281999,2.92395936896837,4.28814675254911,4.71438024037614,6.66198342434943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0|short_description=p1@uc008rjh.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=29bp_to_uc008rjh.1_5end | |||
|cluster_id=chr3:130814957..130814978,- | |||
|description=CAGE_peak_1_at_uc008rjh.1_5end | |||
|id=chr3:130814957..130814978,- | |||
|ontology_enrichment_celltype=CL:0000791!2.69e-13!9;CL:0000789!2.69e-13!9;CL:0002420!2.69e-13!9;CL:0002419!2.69e-13!9;CL:0000790!2.69e-13!9;CL:0000624!8.03e-12!8;CL:0000838!2.21e-11!12;CL:0000084!1.99e-10!11;CL:0000827!1.99e-10!11;CL:0000542!2.72e-10!13;CL:0000051!2.72e-10!13;CL:0000893!6.32e-09!6;CL:0002489!6.32e-09!6;CL:0000898!6.32e-09!6;CL:0000809!6.32e-09!6;CL:0000810!6.32e-09!6;CL:0000895!6.32e-09!6;CL:0000808!6.32e-09!6;CL:0000894!6.32e-09!6;CL:0000806!6.32e-09!6;CL:0000807!6.32e-09!6;CL:0000805!6.32e-09!6;CL:0002425!6.32e-09!6;CL:0002436!6.32e-09!6;CL:0002427!6.32e-09!6;CL:0002428!6.32e-09!6;CL:0002429!6.32e-09!6;CL:0002433!6.32e-09!6;CL:0002431!6.32e-09!6;CL:0002432!6.32e-09!6;CL:0000738!3.06e-07!17;CL:0002087!3.06e-07!17;CL:0002031!5.17e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.04e-22,9;CL:0000789,6.04e-22,9;CL:0002420,6.04e-22,9;CL:0002419,6.04e-22,9;CL:0000790,6.04e-22,9;CL:0000624,3.24e-18,8;CL:0000084,8.35e-18,11;CL:0000827,8.35e-18,11;CL:0000838,2.99e-16,12;CL:0000542,6.19e-15,13;CL:0000051,6.19e-15,13;CL:0000738,3.25e-11,17;CL:0002087,3.25e-11,17;CL:0000893,3.93e-11,6;CL:0002489,3.93e-11,6;CL:0000898,3.93e-11,6;CL:0000809,3.93e-11,6;CL:0000810,3.93e-11,6;CL:0000895,3.93e-11,6;CL:0000808,3.93e-11,6;CL:0000894,3.93e-11,6;CL:0000806,3.93e-11,6;CL:0000807,3.93e-11,6;CL:0000805,3.93e-11,6;CL:0002425,3.93e-11,6;CL:0002436,3.93e-11,6;CL:0002427,3.93e-11,6;CL:0002428,3.93e-11,6;CL:0002429,3.93e-11,6;CL:0002433,3.93e-11,6;CL:0002431,3.93e-11,6;CL:0002432,3.93e-11,6;CL:0002031,2.43e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.09e-22!23;UBERON:0000974!1.09e-22!23;UBERON:0004807!1.09e-22!23;UBERON:0005058!1.09e-22!23;UBERON:0003351!1.09e-22!23;UBERON:0009113!1.09e-22!23;UBERON:0003295!1.09e-22!23;UBERON:0009722!1.09e-22!23;UBERON:0005562!1.09e-22!23;UBERON:0007690!1.09e-22!23;UBERON:0006562!1.83e-21!24;UBERON:0003408!1.83e-21!24;UBERON:0001557!1.83e-21!24;UBERON:0001042!1.83e-21!24;UBERON:0008814!1.83e-21!24;UBERON:0009145!1.83e-21!24;UBERON:0004177!3.34e-20!29;UBERON:0000072!2.45e-18!27;UBERON:0002390!4.38e-14!45;UBERON:0003061!4.38e-14!45;UBERON:0002193!4.90e-14!48;UBERON:0000065!2.99e-13!41;UBERON:0001004!9.10e-13!42;UBERON:0000063!1.13e-12!35;UBERON:0005057!1.47e-08!51;UBERON:0002405!2.86e-07!70;UBERON:0007811!6.32e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.26e-40,23;UBERON:0000974,2.26e-40,23;UBERON:0004807,2.26e-40,23;UBERON:0005058,2.26e-40,23;UBERON:0003351,2.26e-40,23;UBERON:0009113,2.26e-40,23;UBERON:0003295,2.26e-40,23;UBERON:0009722,2.26e-40,23;UBERON:0005562,2.26e-40,23;UBERON:0007690,2.26e-40,23;UBERON:0006562,1.41e-38,24;UBERON:0003408,1.41e-38,24;UBERON:0001557,1.41e-38,24;UBERON:0001042,1.41e-38,24;UBERON:0008814,1.41e-38,24;UBERON:0009145,1.41e-38,24;UBERON:0000072,5.48e-34,27;UBERON:0004177,1.87e-31,29;UBERON:0005057,1.87e-31,29;UBERON:0000077,1.38e-25,35;UBERON:0007811,8.50e-25,36;UBERON:0000065,1.98e-21,41;UBERON:0001004,7.48e-21,42;UBERON:0000153,2.66e-20,43;UBERON:0002390,2.84e-19,45;UBERON:0003061,2.84e-19,45;UBERON:0002193,6.84e-18,48;UBERON:0002405,6.84e-18,48;UBERON:0003929,2.99e-15,55;UBERON:0002368,9.69e-14,60;UBERON:0002530,1.84e-12,65;UBERON:0000490,3.15e-12,66;UBERON:0005911,1.43e-11,69;UBERON:0000949,5.73e-11,72;UBERON:0001041,1.40e-09,80;UBERON:0003081,1.42e-08,87;UBERON:0000926,2.03e-08,120;UBERON:0004120,2.03e-08,120;UBERON:0006603,2.03e-08,120;UBERON:0001048,3.51e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,6.84353614240354,4.78681655315667,6.08567768437183,0.171217968225505,0.478632953972018,6.33442700745461,8.91688104673774,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,15.9579671242496,11.4271891708438,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,0.255374676170375,0.307213066512487,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0.410082683163076,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0,0,0,0,0,0,0,3.38217769156408,2.59227005632079,6.95224465381992,0.810900861160657,0.821687657318618,1.81889152168913,3.04345382634718,3.77494574084403,2.88469078847925,3.10148007066612,2.62512769865184,3.35309949281999,2.92395936896837,4.28814675254911,4.71438024037614,6.66198342434943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | |||
|short_description=p1@uc008rjh.1 | |||
}} |
Latest revision as of 01:06, 6 August 2015
Short description: | p1@uc008rjh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008rjh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 29bp_to_uc008rjh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data