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FFCP PHASE1:Mm9::chrX:149472017..149472028,-: Difference between revisions

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{{FFCP|EntrezGene=75625|HGNC=|MCL_coexpression_id=2506|UniProt=Q9NWG9,Q3UKU3|association_with_transcript=77bp_to_ENSMUST00000051484,NM_023788,uc009uqq.1_5end|description=CAGE_peak_4_at_Mageh1_5end|id=chrX:149472017..149472028,-|ontology_enrichment_celltype=CL:0000393!7.02e-16!39;CL:0000211!7.02e-16!39;CL:0000540!3.06e-15!33;CL:0000047!3.06e-15!33;CL:0000031!3.06e-15!33;CL:0000404!3.06e-15!33;CL:0000221!6.34e-14!44;CL:0000133!6.34e-14!44;CL:0000055!1.41e-13!50;CL:0002319!2.11e-13!43;CL:0000117!9.80e-12!23;CL:0000337!9.80e-12!23;CL:0002321!6.98e-07!70;CL:0000220!6.98e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,2.91e-26,33;CL:0000047,2.91e-26,33;CL:0000031,2.91e-26,33;CL:0000404,2.91e-26,33;CL:0000117,3.16e-24,23;CL:0000337,3.16e-24,23;CL:0000393,4.82e-24,39;CL:0000211,4.82e-24,39;CL:0002319,3.85e-19,43;CL:0000221,1.31e-18,44;CL:0000133,1.31e-18,44;CL:0002321,2.18e-11,70;CL:0002609,5.32e-11,6;CL:0002613,9.67e-10,3;CL:0000120,1.34e-09,3;CL:0000723,8.31e-09,91;CL:0000048,8.31e-09,91;CL:0000034,5.62e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.09e-21!73;UBERON:0005743!2.09e-21!73;UBERON:0000073!5.61e-21!75;UBERON:0001016!5.61e-21!75;UBERON:0004121!1.98e-20!102;UBERON:0000924!1.98e-20!102;UBERON:0006601!1.98e-20!102;UBERON:0002346!2.46e-18!71;UBERON:0003075!2.46e-18!71;UBERON:0007284!2.46e-18!71;UBERON:0003056!5.46e-16!49;UBERON:0001049!8.88e-16!52;UBERON:0005068!8.88e-16!52;UBERON:0006241!8.88e-16!52;UBERON:0007135!8.88e-16!52;UBERON:0000033!1.89e-15!63;UBERON:0002780!7.60e-14!39;UBERON:0001890!7.60e-14!39;UBERON:0006240!7.60e-14!39;UBERON:0003080!8.58e-14!40;UBERON:0000955!8.19e-13!50;UBERON:0006238!8.19e-13!50;UBERON:0002616!2.54e-12!49;UBERON:0002020!1.11e-11!34;UBERON:0004111!5.12e-09!122;UBERON:0002791!6.24e-09!29;UBERON:0003528!6.24e-09!29;UBERON:0001893!6.24e-09!29;UBERON:0000025!1.21e-08!114;UBERON:0000153!6.27e-08!94;UBERON:0000468!9.60e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.07e-20,73;UBERON:0001016,1.50e-19,75;UBERON:0004121,5.72e-17,95;UBERON:0000924,5.72e-17,95;UBERON:0006601,5.72e-17,95;UBERON:0002346,1.17e-15,64;UBERON:0003075,1.17e-15,64;UBERON:0007284,1.17e-15,64;UBERON:0002020,4.87e-15,34;UBERON:0001049,7.41e-15,52;UBERON:0005068,7.41e-15,52;UBERON:0006241,7.41e-15,52;UBERON:0007135,7.41e-15,52;UBERON:0010371,1.28e-14,73;UBERON:0002780,1.56e-14,39;UBERON:0001890,1.56e-14,39;UBERON:0006240,1.56e-14,39;UBERON:0000073,3.79e-14,54;UBERON:0003080,4.42e-14,40;UBERON:0003056,6.12e-14,49;UBERON:0002616,8.87e-12,46;UBERON:0010314,9.58e-12,92;UBERON:0000955,1.88e-11,47;UBERON:0006238,1.88e-11,47;UBERON:0003528,2.53e-11,29;UBERON:0002791,2.53e-11,29;UBERON:0001893,2.53e-11,29;UBERON:0000956,4.64e-07,21;UBERON:0001869,4.64e-07,21;UBERON:0000203,4.64e-07,21|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,0.436050312760893,0.219686182734472,0.972149495371417,0.419959264876088,0,0,0,0,1.28629718017973,0.573066879877513,0.515672092277442,2.42779753031517,2.64495489636016,1.90149421051854,0.338844532069132,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,1.24427534770173,1.35005938331691,1.47227472945967,1.14260393761521,1.54607978666129,0.734944795289724,1.0543001812006,3.67687514644008,0,0.893811366596314,0.153606533256243,2.90149833006426,2.37867873366265,3.12548022334056,0.558365998002762,1.12552522006336,0.45839474333043,0.883885756421003,0.996601765593721,1.86399445825301,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0.448026887097336,0,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0,0.691846491768175,0.452167921657868,0.352766121407114,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.173824320192276,0.255715457330331,0.41557608911912,1.1356888414743,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.540186389416048,1.05493372485001,0.680364991513279,0.640568601424249,1.12442069471675,0.258703370739016,0.862271971731369,0.756424320671277,0.351902248327898,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0.697601834251224,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0.841159794256509,1.44066457330998,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.758671603812327,0.114248512609729,0,0.407302655690628,0.581857461502877,0.210407459670956,0.252946148497029,0,0,0.123397163921801,0.296452627087149,0.1668451057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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75625
|HGNC=
|MCL_coexpression_id=2506
|TSSclassifier=NA
|UniProt=uniprot:Q9NWG9,uniprot:Q3UKU3
|association_with_transcript=77bp_to_ENSMUST00000051484,NM_023788,uc009uqq.1_5end
|cluster_id=chrX:149472017..149472028,-
|description=CAGE_peak_4_at_Mageh1_5end
|id=chrX:149472017..149472028,-
|ontology_enrichment_celltype=CL:0000393!7.02e-16!39;CL:0000211!7.02e-16!39;CL:0000540!3.06e-15!33;CL:0000047!3.06e-15!33;CL:0000031!3.06e-15!33;CL:0000404!3.06e-15!33;CL:0000221!6.34e-14!44;CL:0000133!6.34e-14!44;CL:0000055!1.41e-13!50;CL:0002319!2.11e-13!43;CL:0000117!9.80e-12!23;CL:0000337!9.80e-12!23;CL:0002321!6.98e-07!70;CL:0000220!6.98e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000540,2.91e-26,33;CL:0000047,2.91e-26,33;CL:0000031,2.91e-26,33;CL:0000404,2.91e-26,33;CL:0000117,3.16e-24,23;CL:0000337,3.16e-24,23;CL:0000393,4.82e-24,39;CL:0000211,4.82e-24,39;CL:0002319,3.85e-19,43;CL:0000221,1.31e-18,44;CL:0000133,1.31e-18,44;CL:0002321,2.18e-11,70;CL:0002609,5.32e-11,6;CL:0002613,9.67e-10,3;CL:0000120,1.34e-09,3;CL:0000723,8.31e-09,91;CL:0000048,8.31e-09,91;CL:0000034,5.62e-08,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.09e-21!73;UBERON:0005743!2.09e-21!73;UBERON:0000073!5.61e-21!75;UBERON:0001016!5.61e-21!75;UBERON:0004121!1.98e-20!102;UBERON:0000924!1.98e-20!102;UBERON:0006601!1.98e-20!102;UBERON:0002346!2.46e-18!71;UBERON:0003075!2.46e-18!71;UBERON:0007284!2.46e-18!71;UBERON:0003056!5.46e-16!49;UBERON:0001049!8.88e-16!52;UBERON:0005068!8.88e-16!52;UBERON:0006241!8.88e-16!52;UBERON:0007135!8.88e-16!52;UBERON:0000033!1.89e-15!63;UBERON:0002780!7.60e-14!39;UBERON:0001890!7.60e-14!39;UBERON:0006240!7.60e-14!39;UBERON:0003080!8.58e-14!40;UBERON:0000955!8.19e-13!50;UBERON:0006238!8.19e-13!50;UBERON:0002616!2.54e-12!49;UBERON:0002020!1.11e-11!34;UBERON:0004111!5.12e-09!122;UBERON:0002791!6.24e-09!29;UBERON:0003528!6.24e-09!29;UBERON:0001893!6.24e-09!29;UBERON:0000025!1.21e-08!114;UBERON:0000153!6.27e-08!94;UBERON:0000468!9.60e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.07e-20,73;UBERON:0001016,1.50e-19,75;UBERON:0004121,5.72e-17,95;UBERON:0000924,5.72e-17,95;UBERON:0006601,5.72e-17,95;UBERON:0002346,1.17e-15,64;UBERON:0003075,1.17e-15,64;UBERON:0007284,1.17e-15,64;UBERON:0002020,4.87e-15,34;UBERON:0001049,7.41e-15,52;UBERON:0005068,7.41e-15,52;UBERON:0006241,7.41e-15,52;UBERON:0007135,7.41e-15,52;UBERON:0010371,1.28e-14,73;UBERON:0002780,1.56e-14,39;UBERON:0001890,1.56e-14,39;UBERON:0006240,1.56e-14,39;UBERON:0000073,3.79e-14,54;UBERON:0003080,4.42e-14,40;UBERON:0003056,6.12e-14,49;UBERON:0002616,8.87e-12,46;UBERON:0010314,9.58e-12,92;UBERON:0000955,1.88e-11,47;UBERON:0006238,1.88e-11,47;UBERON:0003528,2.53e-11,29;UBERON:0002791,2.53e-11,29;UBERON:0001893,2.53e-11,29;UBERON:0000956,4.64e-07,21;UBERON:0001869,4.64e-07,21;UBERON:0000203,4.64e-07,21
|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,0.436050312760893,0.219686182734472,0.972149495371417,0.419959264876088,0,0,0,0,1.28629718017973,0.573066879877513,0.515672092277442,2.42779753031517,2.64495489636016,1.90149421051854,0.338844532069132,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,1.24427534770173,1.35005938331691,1.47227472945967,1.14260393761521,1.54607978666129,0.734944795289724,1.0543001812006,3.67687514644008,0,0.893811366596314,0.153606533256243,2.90149833006426,2.37867873366265,3.12548022334056,0.558365998002762,1.12552522006336,0.45839474333043,0.883885756421003,0.996601765593721,1.86399445825301,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0.448026887097336,0,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0,0.691846491768175,0.452167921657868,0.352766121407114,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.173824320192276,0.255715457330331,0.41557608911912,1.1356888414743,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.540186389416048,1.05493372485001,0.680364991513279,0.640568601424249,1.12442069471675,0.258703370739016,0.862271971731369,0.756424320671277,0.351902248327898,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0.697601834251224,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0.841159794256509,1.44066457330998,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.758671603812327,0.114248512609729,0,0.407302655690628,0.581857461502877,0.210407459670956,0.252946148497029,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0,0,0.505157755894224,0,0,0,0.947457058852424,0.325929952884052,0.169745085775188,0,0,0,0.585400943573396,0.472905432318573,0.664394068946325,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0.54390568381871,0,0,0.160550589987792,0.468846746368813,0,0,0.315508219416257,1.17131623288992,0.430846795465598,0.955875191810208,0.222798674082394,0.566153061577665,0.809621403349789,1.46127928955656,1.58115111178609,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,1.70219802876894,0.900305470156551,1.55230420539305,1.28602221018955,0.886701168211368,0.891844088010353,0.987294123612726,0.913394847343798,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.448549638131936,0.165458490457098,0,0,0.168956125490778,0.704143431874524,0.13020438484395,0,0,0,0,0.608175645870493,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.549454872801795,0.428736758158132,1.00314420807073,0.564751842617067,3.68260189205742,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0.415149390336707,1.59609949360412,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.384150914429216,0.516919220600519,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.581385666529314,0,0.592302255241736,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.464810523557898,0.385813221962283,0.749431733813838,0.233931608445408,0,0.57386499620653,0.441182838239031,0
|short_description=p4@Mageh1
}}

Revision as of 02:42, 6 August 2015

Short description:p4@Mageh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Mageh1_5end
Coexpression cluster:MCL_coexpression_mm9:2506
Association with transcript: 77bp_to_ENSMUST00000051484, NM_023788, uc009uqq.1_5end
EntrezGene:75625
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Mageh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.07e-2073
nervous system1.50e-1975
ectoderm-derived structure5.72e-1795
ectoderm5.72e-1795
presumptive ectoderm5.72e-1795
neurectoderm1.17e-1564
neural plate1.17e-1564
presumptive neural plate1.17e-1564
gray matter4.87e-1534
neural tube7.41e-1552
neural rod7.41e-1552
future spinal cord7.41e-1552
neural keel7.41e-1552
ecto-epithelium1.28e-1473
regional part of forebrain1.56e-1439
forebrain1.56e-1439
future forebrain1.56e-1439
regional part of nervous system3.79e-1454
anterior neural tube4.42e-1440
pre-chordal neural plate6.12e-1449
regional part of brain8.87e-1246
structure with developmental contribution from neural crest9.58e-1292
brain1.88e-1147
future brain1.88e-1147
brain grey matter2.53e-1129
regional part of telencephalon2.53e-1129
telencephalon2.53e-1129
cerebral cortex4.64e-0721
cerebral hemisphere4.64e-0721
pallium4.64e-0721
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