FFCP PHASE2:Hg19::chr2:47596330..47596380,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@EPCAM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_EPCAM_5end |
| Coexpression cluster: | C4235_nonsmall_endometrial_colon_small_tubular_argyrophil_Prostate |
| Association with transcript: | 43bp_to_ENST00000263735, NM_002354, uc002rvx.2_5end |
| EntrezGene: | EPCAM |
| HGNC: | 11529 |
| UniProt: | P16422 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@EPCAM |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.06e-21 | 253 |
| kidney cell | 5.76e-09 | 17 |
| kidney epithelial cell | 5.76e-09 | 17 |
| endodermal cell | 2.41e-08 | 58 |
| kidney tubule cell | 3.21e-08 | 10 |
| nephron tubule epithelial cell | 3.21e-08 | 10 |
| germ line cell | 3.85e-08 | 7 |
| germ cell | 3.85e-08 | 7 |
| epithelial cell of nephron | 8.65e-08 | 15 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 5.95e-14 | 101 |
| digestive system | 4.31e-13 | 145 |
| digestive tract | 4.31e-13 | 145 |
| primitive gut | 4.31e-13 | 145 |
| subdivision of digestive tract | 6.68e-13 | 118 |
| endoderm-derived structure | 1.12e-10 | 160 |
| endoderm | 1.12e-10 | 160 |
| presumptive endoderm | 1.12e-10 | 160 |
| subdivision of trunk | 1.82e-10 | 112 |
| kidney | 7.40e-10 | 26 |
Showing 1 to 10 of 41 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 8.38e-42 | 106 |
| cell type cancer | 1.57e-31 | 143 |
| cancer | 1.51e-18 | 235 |
| disease of cellular proliferation | 1.43e-17 | 239 |
| adenocarcinoma | 3.26e-17 | 25 |
| organ system cancer | 3.47e-08 | 137 |
| respiratory system cancer | 4.35e-08 | 16 |
| squamous cell carcinoma | 7.84e-08 | 14 |
| gastrointestinal system cancer | 2.18e-07 | 14 |
| lung cancer | 3.90e-07 | 15 |
Showing 1 to 10 of 11 entries
