FFCP PHASE2:Mm9::chr8:12395287..12395295,+
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| Short description: | p9@Sox1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Sox1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:184 |
| Association with transcript: | -223bp_to_NM_009233, uc009kwa.2_5end |
| EntrezGene: | Sox1 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p9@Sox1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron of cerebral cortex | 5.23e-52 | 6 |
| hippocampal neuron | 1.17e-38 | 3 |
| CNS neuron (sensu Vertebrata) | 6.29e-14 | 23 |
| neuroblast (sensu Vertebrata) | 6.29e-14 | 23 |
| neural cell | 1.06e-10 | 43 |
| ectodermal cell | 1.85e-10 | 44 |
| neurectodermal cell | 1.85e-10 | 44 |
| neuron | 8.36e-10 | 33 |
| neuronal stem cell | 8.36e-10 | 33 |
| neuroblast | 8.36e-10 | 33 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| Ammon's horn | 4.54e-17 | 7 |
| lobe parts of cerebral cortex | 4.54e-17 | 7 |
| hippocampal formation | 4.54e-17 | 7 |
| limbic system | 4.54e-17 | 7 |
| limbic lobe | 4.54e-17 | 7 |
| brain grey matter | 1.01e-15 | 29 |
| regional part of telencephalon | 1.01e-15 | 29 |
| telencephalon | 1.01e-15 | 29 |
| cerebral cortex | 3.22e-15 | 21 |
| cerebral hemisphere | 3.22e-15 | 21 |
Showing 1 to 10 of 31 entries
