FF:11367-117I8: Difference between revisions

Revision as of 17:59, 29 June 2012

Name:	Smooth Muscle Cells - Umbilical Artery, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	umbilical artery
dev stage	infant
sex	female
age	neonatal
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1438
catalog number	CA252-R10n
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0443
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.117
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.613
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.261
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.174
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.117
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.285
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.497
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.709
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0213
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.635
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.033
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0166
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.117
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0394
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.101
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.249
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.117
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.117
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.456
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0807
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.117
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.117
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.607
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.797
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0.117
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0684
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.35
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.285
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11991

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.152
MA0003.1	MA0003.1	0.291
MA0004.1	MA0004.1	0.265
MA0006.1	MA0006.1	0.0864
MA0007.1	MA0007.1	0.218
MA0009.1	MA0009.1	0.505
MA0014.1	MA0014.1	0.896
MA0017.1	MA0017.1	0.397
MA0018.2	MA0018.2	0.00885
MA0019.1	MA0019.1	0.171
MA0024.1	MA0024.1	0.209
MA0025.1	MA0025.1	0.381
MA0027.1	MA0027.1	0.864
MA0028.1	MA0028.1	0.498
MA0029.1	MA0029.1	0.33
MA0030.1	MA0030.1	0.175
MA0031.1	MA0031.1	0.00457
MA0035.2	MA0035.2	0.712
MA0038.1	MA0038.1	0.459
MA0039.2	MA0039.2	0.742
MA0040.1	MA0040.1	0.756
MA0041.1	MA0041.1	0.562
MA0042.1	MA0042.1	0.869
MA0043.1	MA0043.1	0.0218
MA0046.1	MA0046.1	0.92
MA0047.2	MA0047.2	0.304
MA0048.1	MA0048.1	0.0721
MA0050.1	MA0050.1	0.00168
MA0051.1	MA0051.1	0.0528
MA0052.1	MA0052.1	0.786
MA0055.1	MA0055.1	0.232
MA0057.1	MA0057.1	0.122
MA0058.1	MA0058.1	0.0561
MA0059.1	MA0059.1	0.775
MA0060.1	MA0060.1	0.53
MA0061.1	MA0061.1	0.109
MA0062.2	MA0062.2	0.366
MA0065.2	MA0065.2	0.168
MA0066.1	MA0066.1	0.313
MA0067.1	MA0067.1	0.0039
MA0068.1	MA0068.1	0.802
MA0069.1	MA0069.1	0.914
MA0070.1	MA0070.1	0.925
MA0071.1	MA0071.1	0.495
MA0072.1	MA0072.1	0.662
MA0073.1	MA0073.1	0.552
MA0074.1	MA0074.1	0.133
MA0076.1	MA0076.1	0.141
MA0077.1	MA0077.1	0.159
MA0078.1	MA0078.1	0.445
MA0079.2	MA0079.2	0.92
MA0080.2	MA0080.2	0.361
MA0081.1	MA0081.1	0.208
MA0083.1	MA0083.1	5.54877e-12
MA0084.1	MA0084.1	0.797
MA0087.1	MA0087.1	0.72
MA0088.1	MA0088.1	0.482
MA0090.1	MA0090.1	0.0237
MA0091.1	MA0091.1	0.452
MA0092.1	MA0092.1	0.0975
MA0093.1	MA0093.1	0.202
MA0099.2	MA0099.2	7.45947e-9
MA0100.1	MA0100.1	0.144
MA0101.1	MA0101.1	0.0932
MA0102.2	MA0102.2	0.0961
MA0103.1	MA0103.1	0.12
MA0104.2	MA0104.2	0.165
MA0105.1	MA0105.1	0.18
MA0106.1	MA0106.1	0.285
MA0107.1	MA0107.1	0.0538
MA0108.2	MA0108.2	3.47534e-17
MA0111.1	MA0111.1	0.224
MA0112.2	MA0112.2	0.0426
MA0113.1	MA0113.1	0.649
MA0114.1	MA0114.1	0.706
MA0115.1	MA0115.1	0.225
MA0116.1	MA0116.1	0.189
MA0117.1	MA0117.1	0.835
MA0119.1	MA0119.1	0.17
MA0122.1	MA0122.1	0.618
MA0124.1	MA0124.1	0.795
MA0125.1	MA0125.1	0.356
MA0131.1	MA0131.1	0.925
MA0135.1	MA0135.1	0.269
MA0136.1	MA0136.1	0.497
MA0137.2	MA0137.2	0.327
MA0138.2	MA0138.2	0.291
MA0139.1	MA0139.1	0.853
MA0140.1	MA0140.1	0.426
MA0141.1	MA0141.1	0.601
MA0142.1	MA0142.1	0.717
MA0143.1	MA0143.1	0.185
MA0144.1	MA0144.1	0.266
MA0145.1	MA0145.1	0.116
MA0146.1	MA0146.1	0.305
MA0147.1	MA0147.1	0.36
MA0148.1	MA0148.1	0.44
MA0149.1	MA0149.1	0.885
MA0150.1	MA0150.1	0.323
MA0152.1	MA0152.1	0.989
MA0153.1	MA0153.1	0.987
MA0154.1	MA0154.1	0.21
MA0155.1	MA0155.1	0.0607
MA0156.1	MA0156.1	0.147
MA0157.1	MA0157.1	0.068
MA0159.1	MA0159.1	0.886
MA0160.1	MA0160.1	0.741
MA0162.1	MA0162.1	0.0211
MA0163.1	MA0163.1	0.0545
MA0164.1	MA0164.1	0.85
MA0258.1	MA0258.1	0.318
MA0259.1	MA0259.1	0.471

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11991

Novel motif	Logo	P-value
1	1	0.96
10	10	0.738
100	100	0.947
101	101	0.222
102	102	0.954
103	103	0.539
104	104	0.591
105	105	0.438
106	106	0.0532
107	107	0.0199
108	108	0.33
109	109	0.0568
11	11	0.112
110	110	0.172
111	111	0.85
112	112	0.343
113	113	0.171
114	114	0.681
115	115	0.164
116	116	0.00392
117	117	0.679
118	118	0.92
119	119	0.18
12	12	0.238
120	120	0.242
121	121	0.62
122	122	0.912
123	123	0.0189
124	124	0.247
125	125	0.413
126	126	0.721
127	127	0.191
128	128	0.124
129	129	0.676
13	13	0.508
130	130	0.643
131	131	0.278
132	132	0.981
133	133	0.71
134	134	0.272
135	135	0.0248
136	136	0.192
137	137	0.612
138	138	0.408
139	139	0.564
14	14	0.377
140	140	0.939
141	141	0.46
142	142	0.082
143	143	0.00123
144	144	0.592
145	145	0.276
146	146	0.249
147	147	0.52
148	148	0.613
149	149	0.0993
15	15	0.714
150	150	0.162
151	151	0.776
152	152	0.0316
153	153	0.517
154	154	0.533
155	155	0.219
156	156	0.668
157	157	0.119
158	158	0.0137
159	159	0.247
16	16	0.0865
160	160	0.122
161	161	0.177
162	162	0.674
163	163	0.74
164	164	0.304
165	165	0.966
166	166	0.521
167	167	0.199
168	168	0.716
169	169	0.0774
17	17	0.173
18	18	0.225
19	19	0.0383
2	2	0.184
20	20	0.328
21	21	0.65
22	22	0.345
23	23	0.258
24	24	0.704
25	25	0.647
26	26	0.294
27	27	0.533
28	28	0.29
29	29	0.403
3	3	0.475
30	30	0.429
31	31	0.466
32	32	4.96496e-6
33	33	0.454
34	34	0.151
35	35	0.941
36	36	0.663
37	37	0.0852
38	38	0.999
39	39	0.365
4	4	0.577
40	40	0.0658
41	41	0.793
42	42	0.76
43	43	0.343
44	44	0.0839
45	45	0.476
46	46	0.393
47	47	0.646
48	48	0.335
49	49	0.794
5	5	0.576
50	50	0.68
51	51	0.773
52	52	0.414
53	53	0.242
54	54	0.52
55	55	0.759
56	56	0.572
57	57	0.705
58	58	0.658
59	59	0.0439
6	6	0.677
60	60	0.477
61	61	0.882
62	62	0.73
63	63	0.301
64	64	0.306
65	65	0.233
66	66	0.847
67	67	0.867
68	68	0.329
69	69	0.69
7	7	0.819
70	70	0.787
71	71	0.422
72	72	0.69
73	73	0.00617
74	74	0.597
75	75	0.374
76	76	0.154
77	77	0.00132
78	78	0.689
79	79	0.00129
8	8	0.0392
80	80	0.337
81	81	0.565
82	82	0.698
83	83	0.621
84	84	0.717
85	85	0.215
86	86	0.753
87	87	0.00795
88	88	0.122
89	89	0.207
9	9	0.0881
90	90	0.101
91	91	0.224
92	92	0.957
93	93	0.696
94	94	0.862
95	95	0.147
96	96	0.863
97	97	0.87
98	98	0.789
99	99	0.00136

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11991

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000176 human smooth muscle cell of umbilical artery sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0000222 (mesodermal cell)
0002594 (smooth muscle cell of the umbilical artery)
0000355 (multi-potent skeletal muscle stem cell)
0000514 (smooth muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001134 (skeletal muscle tissue)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000926 (mesoderm)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0003914 (epithelial tube)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0003509 (arterial blood vessel)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0001981 (blood vessel)
0002049 (vasculature)
0000486 (multilaminar epithelium)
0007500 (epithelial tube open at both ends)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0007798 (vascular system)
0001015 (musculature)
0002532 (epiblast (generic))
0001310 (umbilical artery)
0002329 (somite)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0000383 (musculature of body)
0004572 (arterial system)
0004537 (blood vasculature)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0003081 (lateral plate mesoderm)
0001009 (circulatory system)
0006603 (presumptive mesoderm)
0003082 (myotome)
0004872 (splanchnic layer of lateral plate mesoderm)
0006965 (vascular cord)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!2.04!109.06!SOX17;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.60!38.42!ZBED1;;chr4:174450089..174450153,-!p2@HAND2!1.39!23.55!HAND2;;chr4:174451370..174451387,-!p1@HAND2!1.36!21.69!HAND2;;chr11:46299199..46299233,+!p1@CREB3L1!1.32!101.31!CREB3L1;;chr12:66218255..66218304,+!p3@HMGA2!1.29!48.95!HMGA2;;chr16:86600426..86600441,+!p1@FOXC2!1.24!39.66!FOXC2;;chr2:68592406..68592424,+!p1@PLEK!1.23!16.11!PLEK;;chr11:47400078..47400106,-!p1@SPI1!1.22!15.49!SPI1;;chr6:34204921..34204939,+!p3@HMGA1!1.19!426.63!HMGA1;;chr10:94449703..94449718,+!p1@HHEX!1.17!52.67!HHEX;;chr12:66218836..66218888,+!p1@HMGA2!1.16!124.55!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!1.16!22.93!CREB3L1;;chr5:72744445..72744466,-!p2@FOXD1!1.13!20.76!FOXD1;;chr12:66218598..66218645,+!p2@HMGA2!1.11!55.46!HMGA2;;chr11:65667884..65667895,-!p2@FOSL1!1.10!45.23!FOSL1;;chr2:176969228..176969260,+!p1@HOXD11!1.08!11.15!HOXD11;;chr11:34642612..34642646,+!p1@EHF!1.06!10.53!EHF;;chr5:72744594..72744609,-!p1@FOXD1!1.04!45.85!FOXD1;;chr7:27224842..27224872,-!p1@HOXA11!1.00!8.98!HOXA11;;chr7:35293685..35293718,-!p1@TBX20!1.00!8.98!TBX20;;chr7:27205106..27205134,-!p2@HOXA9!0.99!8.68!HOXA9;;chr12:66218212..66218244,+!p5@HMGA2!0.98!12.70!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!0.98!11.77!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!0.97!27.57!TWIST2;;chr11:65686802..65686818,+!p6@DRAP1!0.97!14.87!DRAP1;;chr9:35732647..35732678,+!p2@CREB3!0.96!46.78!CREB3;;chr11:65686732..65686756,+!p2@DRAP1!0.96!35.01!DRAP1;;chr1:170632285..170632309,+!p1@PRRX1!0.96!9.29!PRRX1;;chr4:111544219..111544240,-!p1@PITX2!0.96!8.06!PITX2;;chr5:134369879..134369898,-!p2@PITX1!0.96!8.06!PITX1;;chr12:54366975..54367001,+!p1@HOXC11!0.94!7.75!HOXC11;;chr19:45260775..45260838,+!p5@BCL3!0.93!9.91!BCL3;;chr19:42636586..42636607,-!p1@POU2F2!0.91!20.45!POU2F2;;chr12:66218904..66218913,+!p11@HMGA2!0.91!7.13!HMGA2;;chr20:42543441..42543497,+!p1@TOX2!0.89!32.22!TOX2;;chr18:19749541..19749557,+!p1@GATA6!0.89!22.00!GATA6;;chr5:134369905..134369972,-!p1@PITX1!0.89!10.53!PITX1;;chr11:65667846..65667868,-!p1@FOSL1!0.88!184.34!FOSL1;;chr12:54380404..54380433,+!p3@HOXC10!0.88!6.51!HOXC10;;chr1:8934931..8934947,-!p4@ENO1!0.86!21.69!ENO1;;chr12:27485762..27485776,+!p3@ARNTL2!0.86!17.66!ARNTL2;;chr12:54378923..54378966,+!p1@HOXC10!0.86!6.20!HOXC10;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.86!6.20!HOXC5;;chr7:27224795..27224840,-!p2@HOXA11!0.86!6.20!HOXA11;;chr20:42543506..42543549,+!p2@TOX2!0.85!15.18!TOX2;;chr1:170633262..170633285,+!p3@PRRX1!0.85!7.13!PRRX1;;chr15:83953397..83953425,-!p1@BNC1!0.85!7.13!BNC1;;chr1:151032860..151032918,+!p1@MLLT11!0.84!74.36!MLLT11;;chr15:67430351..67430366,+!p10@SMAD3!0.82!5.58!SMAD3;;chr6:134210243..134210257,+!p1@TCF21!0.82!5.58!TCF21;;chr4:81118647..81118666,+!p1@PRDM8!0.81!7.44!PRDM8;;chr17:3571863..3571881,-!p1@TAX1BP3!0.80!414.85!TAX1BP3;;chr16:86600870..86600921,+!p2@FOXC2!0.80!5.27!FOXC2;;chr2:5832508..5832524,+!p1@SOX11!0.80!5.27!SOX11;;chr7:27213893..27213954,-!p1@HOXA10!0.80!5.27!HOXA10;;chr11:65687362..65687436,+!p3@DRAP1!0.79!25.72!DRAP1;;chr15:67418119..67418162,+!p5@SMAD3!0.79!5.89!SMAD3;;chr7:44143925..44143970,+!p1@AEBP1!0.78!123.00!AEBP1;;chr12:80085061..80085119,-!p6@PAWR!0.78!8.37!PAWR;;chr18:19749386..19749404,+!p2@GATA6!0.78!7.44!GATA6;;chr7:27205136..27205164,-!p1@HOXA9!0.78!4.96!HOXA9;;chr1:37940170..37940190,+!p1@ZC3H12A!0.77!66.30!ZC3H12A;;chr1:25256756..25256774,-!p1@RUNX3!0.77!9.60!RUNX3;;chr2:239756739..239756755,+!p2@TWIST2!0.77!8.68!TWIST2;;chr7:44143978..44143989,+!p2@AEBP1!0.76!9.29!AEBP1;;chr15:67418047..67418093,+!p4@SMAD3!0.76!6.20!SMAD3;;chr12:54778471..54778528,-!p1@ZNF385A!0.75!4.65!ZNF385A;;chr6:34204672..34204692,+!p1@HMGA1!0.73!558.92!HMGA1;;chr5:72743793..72743855,-!p4@FOXD1!0.73!5.27!FOXD1;;chr7:1577899..1577943,+!p3@MAFK!0.73!4.34!MAFK;;chr2:102091144..102091183,-!p2@RFX8!0.73!4.34!RFX8;;chr17:46682321..46682362,-!p1@HOXB6!0.73!4.34!HOXB6;;chr7:19157248..19157268,-!p1@TWIST1!0.72!13.01!TWIST1;;chr12:66218183..66218209,+!p4@HMGA2!0.72!8.68!HMGA2;;chr1:151032922..151032951,+!p2@MLLT11!0.72!7.44!MLLT11;;chr7:44143997..44144008,+!p3@AEBP1!0.72!5.58!AEBP1;;chr17:59477233..59477263,+!p1@TBX2!0.71!14.25!TBX2;;chr9:35732514..35732530,+!p5@CREB3!0.71!6.20!CREB3;;chr5:72744562..72744573,-!p3@FOXD1!0.71!5.27!FOXD1;;chr12:124873357..124873401,-!p1@NCOR2!0.70!52.67!NCOR2;;chr17:59477275..59477286,+!p3@TBX2!0.70!5.58!TBX2;;chr2:19558373..19558392,-!p1@OSR1!0.67!11.15!OSR1;;chr6:1312325..1312340,+!p1@FOXQ1!0.67!6.51!FOXQ1;;chr8:72756667..72756736,-!p2@MSC!0.67!6.20!MSC;;chr5:72744336..72744359,-!p5@FOXD1!0.67!3.72!FOXD1;;chr6:391743..391759,+!p1@IRF4!0.67!3.72!IRF4;;chr8:55370720..55370733,+!p2@SOX17!0.67!3.72!SOX17;;chr12:54393880..54393962,+!p1@HOXC9!0.67!3.72!HOXC9;;chr12:66218923..66218934,+!p14@HMGA2!0.67!3.72!HMGA2;;chr21:38071430..38071456,+!p1@SIM2!0.67!3.72!SIM2;;chr4:174451350..174451363,-!p3@HAND2!0.67!3.72!HAND2;;chr19:16435625..16435682,+!p1@KLF2!0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FF:11367-117I8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:59, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0