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FFCP PHASE1:Mm9::chr14:75347469..75347481,-: Difference between revisions

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|id=chr14:75347469..75347481,-
|id=chr14:75347469..75347481,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,6.63e-11,3;CL:0002614,3.01e-10,3;CL:0000117,8.73e-10,23;CL:0000337,8.73e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.14e-09!52;UBERON:0005068!1.14e-09!52;UBERON:0006241!1.14e-09!52;UBERON:0007135!1.14e-09!52;UBERON:0000955!1.20e-08!50;UBERON:0006238!1.20e-08!50;UBERON:0002616!1.32e-08!49;UBERON:0002020!4.87e-08!34;UBERON:0000477!9.84e-08!154;UBERON:0000475!2.35e-07!200;UBERON:0007811!2.76e-07!86;UBERON:0002346!3.11e-07!71;UBERON:0003075!3.11e-07!71;UBERON:0007284!3.11e-07!71;UBERON:0001017!3.49e-07!73;UBERON:0005743!3.49e-07!73;UBERON:0000033!4.20e-07!63;UBERON:0000073!8.81e-07!75;UBERON:0001016!8.81e-07!75
|ontology_enrichment_uberon=UBERON:0001049!1.14e-09!52;UBERON:0005068!1.14e-09!52;UBERON:0006241!1.14e-09!52;UBERON:0007135!1.14e-09!52;UBERON:0000955!1.20e-08!50;UBERON:0006238!1.20e-08!50;UBERON:0002616!1.32e-08!49;UBERON:0002020!4.87e-08!34;UBERON:0000477!9.84e-08!154;UBERON:0000475!2.35e-07!200;UBERON:0007811!2.76e-07!86;UBERON:0002346!3.11e-07!71;UBERON:0003075!3.11e-07!71;UBERON:0007284!3.11e-07!71;UBERON:0001017!3.49e-07!73;UBERON:0005743!3.49e-07!73;UBERON:0000033!4.20e-07!63;UBERON:0000073!8.81e-07!75;UBERON:0001016!8.81e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.25e-23,54;UBERON:0001049,1.52e-19,52;UBERON:0005068,1.52e-19,52;UBERON:0006241,1.52e-19,52;UBERON:0007135,1.52e-19,52;UBERON:0001017,4.64e-18,73;UBERON:0001016,1.88e-17,75;UBERON:0002346,4.32e-15,64;UBERON:0003075,4.32e-15,64;UBERON:0007284,4.32e-15,64;UBERON:0003076,5.52e-15,12;UBERON:0003057,5.52e-15,12;UBERON:0002616,7.25e-14,46;UBERON:0000955,1.69e-13,47;UBERON:0006238,1.69e-13,47;UBERON:0004121,8.88e-13,95;UBERON:0000924,8.88e-13,95;UBERON:0006601,8.88e-13,95;UBERON:0010371,1.04e-12,73;UBERON:0002950,1.19e-12,4;UBERON:0001891,1.19e-12,4;UBERON:0009616,1.19e-12,4;UBERON:0010286,1.19e-12,4;UBERON:0004684,6.63e-11,3;UBERON:0002275,6.63e-11,3;UBERON:0002020,9.46e-11,34;UBERON:0002038,3.01e-10,3;UBERON:0009663,3.01e-10,3;UBERON:0009661,3.01e-10,3;UBERON:0000125,3.01e-10,3;UBERON:0002308,3.01e-10,3;UBERON:0010314,3.22e-09,92;UBERON:0003080,8.16e-09,40;UBERON:0000025,1.82e-08,114;UBERON:0004733,2.57e-08,6;UBERON:0004732,2.57e-08,6;UBERON:0002028,2.57e-08,6;UBERON:0007277,2.57e-08,6;UBERON:0002240,3.50e-08,6;UBERON:0005174,3.50e-08,6;UBERON:0001137,3.50e-08,6;UBERON:0002780,1.24e-07,39;UBERON:0001890,1.24e-07,39;UBERON:0006240,1.24e-07,39;UBERON:0004111,1.30e-07,122;UBERON:0002021,1.78e-07,10;UBERON:0000411,1.78e-07,10;UBERON:0001950,1.78e-07,10;UBERON:0003528,3.20e-07,29;UBERON:0002791,3.20e-07,29;UBERON:0001893,3.20e-07,29;UBERON:0001896,8.88e-07,2;UBERON:0002298,8.88e-07,2;UBERON:0005290,8.88e-07,2;UBERON:0010096,8.88e-07,2;UBERON:0003056,9.09e-07,49
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,1.40788722151667,1.63845168425395,0.171217968225505,0.239316476986009,0,0.174840804837995,0,0,0,0.473193248037357,0.274228867211478,0.84877930359606,0.595303031057488,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.58328969722285,0.139986421625363,0,0,0.725362142011344,0.672187598284928,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,1.71390590642282,0.883474163806454,0.122490799214954,0,0,3.30347642998166,3.44755812830007,2.4577045320999,0.659431438650969,0.274462930807229,0.52091337055676,1.67509799400829,2.25105044012672,1.83357897332172,1.47314292736834,1.42371680799103,0.559198337475902,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0,0,0.448026887097336,0.421333260395256,0.340860645156116,0,0.70667914902068,0.422530259330042,0,0,0,0.216491041011214,0,0,0.5709193985953,1.29468941823586,0.445326417194474,0.173485326766136,0,0.691846491768175,0.452167921657868,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,1.46390398505774,2.72280718857492,0.255457055208591,0.599075622529601,0,0,1.3481157546434,0.915001205637253,0.753926112677186,1.73824320192276,0.767146371990992,2.0778804455956,1.62241263067758,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.512454881139399,0.281105173679186,0,0.431135985865684,0,0,0.43839146485515,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.324275238183423,0.438599962275997,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0.264450566663544,0.426576501070468,0.464473343720877,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.49095073923223,0.758838445491087,0.147610147979602,0.470996183524124,0.616985819609003,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0.482443521363367,1.10851914099963,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0.472905432318573,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0,0,1.60550589987792,1.40654023910644,0,0.252470927204373,0,0.780877488593277,0,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.81443479676788,0.824850614862677,0,0,0.906970670894253,0.377210159511796,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0.441056796109924,0.49465875882444,0.807322133479528,0.120625849856312,0.596861720015682,0.492422699235184,0,1.48340241608408,0,0.619160603889667,0.370389054739423,0.941842285023455,0.956859594047176,0.228778173206523,0,0.559805809294632,0.552799895217695,0,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0,0.39061315453185,0.209718688851422,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,0.682205165178267,0.577271049841977,0.233753804363138,0.453460767230423,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.857473516316263,0.501572104035363,0.564751842617067,1.84130094602871,1.14579102687879,2.57779773515531,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,2.07104124700728,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.384150914429216,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0.470546902076653,0.25384382367503,0,0.263069711437843,0.543216455383447,0,0,0.29551344712669,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.644613162144895,0.57386499620653,0,1.15933917810211
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,1.40788722151667,1.63845168425395,0.171217968225505,0.239316476986009,0,0.174840804837995,0,0,0,0.473193248037357,0.274228867211478,0.84877930359606,0.595303031057488,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.58328969722285,0.139986421625363,0,0,0.725362142011344,0.672187598284928,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,1.71390590642282,0.883474163806454,0.122490799214954,0,0,3.30347642998166,3.44755812830007,2.4577045320999,0.659431438650969,0.274462930807229,0.52091337055676,1.67509799400829,2.25105044012672,1.83357897332172,1.47314292736834,1.42371680799103,0.559198337475902,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0,0,0.448026887097336,0.421333260395256,0.340860645156116,0,0.70667914902068,0.422530259330042,0,0,0,0.216491041011214,0,0,0.5709193985953,1.29468941823586,0.445326417194474,0.173485326766136,0,0.691846491768175,0.452167921657868,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,1.46390398505774,2.72280718857492,0.255457055208591,0.599075622529601,0,0,1.3481157546434,0.915001205637253,0.753926112677186,1.73824320192276,0.767146371990992,2.0778804455956,1.62241263067758,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.512454881139399,0.281105173679186,0,0.431135985865684,0,0,0.43839146485515,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.324275238183423,0.438599962275997,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0.264450566663544,0.426576501070468,0.464473343720877,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.49095073923223,0.758838445491087,0.147610147979602,0.470996183524124,0.616985819609003,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0.482443521363367,1.10851914099963,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0.472905432318573,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0,0,1.60550589987792,1.40654023910644,0,0.252470927204373,0,0.780877488593277,0,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.81443479676788,0.824850614862677,0,0,0.906970670894253,0.377210159511796,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0.441056796109924,0.49465875882444,0.807322133479528,0.120625849856312,0.596861720015682,0.492422699235184,0,1.48340241608408,0,0.619160603889667,0.370389054739423,0.941842285023455,0.956859594047176,0.228778173206523,0,0.559805809294632,0.552799895217695,0,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0,0.39061315453185,0.209718688851422,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,0.682205165178267,0.577271049841977,0.233753804363138,0.453460767230423,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.857473516316263,0.501572104035363,0.564751842617067,1.84130094602871,1.14579102687879,2.57779773515531,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,2.07104124700728,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.384150914429216,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0.470546902076653,0.25384382367503,0,0.263069711437843,0.543216455383447,0,0,0.29551344712669,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.644613162144895,0.57386499620653,0,1.15933917810211
|short_description=p5@Lrch1
|short_description=p5@Lrch1
}}
}}

Revision as of 13:18, 14 November 2012

Short description:p5@Lrch1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lrch1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 202bp_to_ENSMUST00000088970, NM_001033439, NM_001252132, uc007uqf.1, uc007uqg.1_5end
EntrezGene:Lrch1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lrch1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron6.63e-113
neuron of the substantia nigra3.01e-103
CNS neuron (sensu Vertebrata)8.73e-1023
neuroblast (sensu Vertebrata)8.73e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.25e-2354
neural tube1.52e-1952
neural rod1.52e-1952
future spinal cord1.52e-1952
neural keel1.52e-1952
central nervous system4.64e-1873
nervous system1.88e-1775
neurectoderm4.32e-1564
neural plate4.32e-1564
presumptive neural plate4.32e-1564
posterior neural tube5.52e-1512
chordal neural plate5.52e-1512
regional part of brain7.25e-1446
brain1.69e-1347
future brain1.69e-1347
ectoderm-derived structure8.88e-1395
ectoderm8.88e-1395
presumptive ectoderm8.88e-1395
ecto-epithelium1.04e-1273
regional part of midbrain1.19e-124
midbrain1.19e-124
presumptive midbrain1.19e-124
midbrain neural tube1.19e-124
raphe nuclei6.63e-113
reticular formation6.63e-113
gray matter9.46e-1134
substantia nigra3.01e-103
telencephalic nucleus3.01e-103
midbrain nucleus3.01e-103
neural nucleus3.01e-103
nucleus of brain3.01e-103
structure with developmental contribution from neural crest3.22e-0992
anterior neural tube8.16e-0940
tube1.82e-08114
segmental subdivision of hindbrain2.57e-086
segmental subdivision of nervous system2.57e-086
hindbrain2.57e-086
presumptive hindbrain2.57e-086
spinal cord3.50e-086
dorsal region element3.50e-086
dorsum3.50e-086
regional part of forebrain1.24e-0739
forebrain1.24e-0739
future forebrain1.24e-0739
anatomical conduit1.30e-07122
occipital lobe1.78e-0710
visual cortex1.78e-0710
neocortex1.78e-0710
brain grey matter3.20e-0729
regional part of telencephalon3.20e-0729
telencephalon3.20e-0729
medulla oblongata8.88e-072
brainstem8.88e-072
myelencephalon8.88e-072
future myelencephalon8.88e-072
pre-chordal neural plate9.09e-0749







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