FFCP PHASE1:Mm9::chr10:70747954..70747977,-: Difference between revisions
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|id=chr10:70747954..70747977,- | |id=chr10:70747954..70747977,- | ||
|ontology_enrichment_celltype=CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0002319!1.41e-14!43;CL:0000393!2.31e-14!39;CL:0000211!2.31e-14!39;CL:0000117!5.11e-14!23;CL:0000337!5.11e-14!23;CL:0000221!5.62e-14!44;CL:0000133!5.62e-14!44;CL:0000055!4.48e-13!50 | |ontology_enrichment_celltype=CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0002319!1.41e-14!43;CL:0000393!2.31e-14!39;CL:0000211!2.31e-14!39;CL:0000117!5.11e-14!23;CL:0000337!5.11e-14!23;CL:0000221!5.62e-14!44;CL:0000133!5.62e-14!44;CL:0000055!4.48e-13!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.16e-15,33;CL:0000047,1.16e-15,33;CL:0000031,1.16e-15,33;CL:0000404,1.16e-15,33;CL:0002319,1.41e-14,43;CL:0000393,2.31e-14,39;CL:0000211,2.31e-14,39;CL:0000117,5.11e-14,23;CL:0000337,5.11e-14,23;CL:0000221,5.62e-14,44;CL:0000133,5.62e-14,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.86e-26!73;UBERON:0005743!5.86e-26!73;UBERON:0000073!1.09e-25!75;UBERON:0001016!1.09e-25!75;UBERON:0004121!5.97e-20!102;UBERON:0000924!5.97e-20!102;UBERON:0006601!5.97e-20!102;UBERON:0001049!8.52e-19!52;UBERON:0005068!8.52e-19!52;UBERON:0006241!8.52e-19!52;UBERON:0007135!8.52e-19!52;UBERON:0000955!6.95e-18!50;UBERON:0006238!6.95e-18!50;UBERON:0002616!1.89e-17!49;UBERON:0002020!3.82e-17!34;UBERON:0000033!3.84e-17!63;UBERON:0002346!2.50e-16!71;UBERON:0003075!2.50e-16!71;UBERON:0007284!2.50e-16!71;UBERON:0002791!6.69e-15!29;UBERON:0003528!6.69e-15!29;UBERON:0001893!6.69e-15!29;UBERON:0003056!1.54e-14!49;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.31e-13!39;UBERON:0001890!1.31e-13!39;UBERON:0006240!1.31e-13!39;UBERON:0000153!1.75e-12!94;UBERON:0007811!3.31e-11!86;UBERON:0000956!1.89e-10!21;UBERON:0001869!1.89e-10!21;UBERON:0000203!1.89e-10!21;UBERON:0002619!3.53e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!5.86e-26!73;UBERON:0005743!5.86e-26!73;UBERON:0000073!1.09e-25!75;UBERON:0001016!1.09e-25!75;UBERON:0004121!5.97e-20!102;UBERON:0000924!5.97e-20!102;UBERON:0006601!5.97e-20!102;UBERON:0001049!8.52e-19!52;UBERON:0005068!8.52e-19!52;UBERON:0006241!8.52e-19!52;UBERON:0007135!8.52e-19!52;UBERON:0000955!6.95e-18!50;UBERON:0006238!6.95e-18!50;UBERON:0002616!1.89e-17!49;UBERON:0002020!3.82e-17!34;UBERON:0000033!3.84e-17!63;UBERON:0002346!2.50e-16!71;UBERON:0003075!2.50e-16!71;UBERON:0007284!2.50e-16!71;UBERON:0002791!6.69e-15!29;UBERON:0003528!6.69e-15!29;UBERON:0001893!6.69e-15!29;UBERON:0003056!1.54e-14!49;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.31e-13!39;UBERON:0001890!1.31e-13!39;UBERON:0006240!1.31e-13!39;UBERON:0000153!1.75e-12!94;UBERON:0007811!3.31e-11!86;UBERON:0000956!1.89e-10!21;UBERON:0001869!1.89e-10!21;UBERON:0000203!1.89e-10!21;UBERON:0002619!3.53e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.86e-26,73;UBERON:0001016,1.09e-25,75;UBERON:0004121,2.30e-23,95;UBERON:0000924,2.30e-23,95;UBERON:0006601,2.30e-23,95;UBERON:0002346,2.80e-20,64;UBERON:0003075,2.80e-20,64;UBERON:0007284,2.80e-20,64;UBERON:0000073,7.93e-20,54;UBERON:0001049,8.52e-19,52;UBERON:0005068,8.52e-19,52;UBERON:0006241,8.52e-19,52;UBERON:0007135,8.52e-19,52;UBERON:0010371,1.17e-17,73;UBERON:0002020,3.82e-17,34;UBERON:0000955,3.01e-16,47;UBERON:0006238,3.01e-16,47;UBERON:0010314,3.01e-16,92;UBERON:0002616,8.00e-16,46;UBERON:0003528,6.69e-15,29;UBERON:0002791,6.69e-15,29;UBERON:0001893,6.69e-15,29;UBERON:0003056,1.54e-14,49;UBERON:0003080,3.97e-14,40;UBERON:0002780,1.31e-13,39;UBERON:0001890,1.31e-13,39;UBERON:0006240,1.31e-13,39;UBERON:0000956,1.89e-10,21;UBERON:0001869,1.89e-10,21;UBERON:0000203,1.89e-10,21;UBERON:0002619,3.53e-08,17 | |||
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| ||
|short_description=p1@Ube2d1 | |short_description=p1@Ube2d1 | ||
}} | }} |
Revision as of 13:51, 14 November 2012
Short description: | p1@Ube2d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ube2d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000144231_5end |
EntrezGene: | Ube2d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.16e-15 | 33 |
neuronal stem cell | 1.16e-15 | 33 |
neuroblast | 1.16e-15 | 33 |
electrically signaling cell | 1.16e-15 | 33 |
neural cell | 1.41e-14 | 43 |
electrically responsive cell | 2.31e-14 | 39 |
electrically active cell | 2.31e-14 | 39 |
CNS neuron (sensu Vertebrata) | 5.11e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-14 | 23 |
ectodermal cell | 5.62e-14 | 44 |
neurectodermal cell | 5.62e-14 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.86e-26 | 73 |
nervous system | 1.09e-25 | 75 |
ectoderm-derived structure | 2.30e-23 | 95 |
ectoderm | 2.30e-23 | 95 |
presumptive ectoderm | 2.30e-23 | 95 |
neurectoderm | 2.80e-20 | 64 |
neural plate | 2.80e-20 | 64 |
presumptive neural plate | 2.80e-20 | 64 |
regional part of nervous system | 7.93e-20 | 54 |
neural tube | 8.52e-19 | 52 |
neural rod | 8.52e-19 | 52 |
future spinal cord | 8.52e-19 | 52 |
neural keel | 8.52e-19 | 52 |
ecto-epithelium | 1.17e-17 | 73 |
gray matter | 3.82e-17 | 34 |
brain | 3.01e-16 | 47 |
future brain | 3.01e-16 | 47 |
structure with developmental contribution from neural crest | 3.01e-16 | 92 |
regional part of brain | 8.00e-16 | 46 |
brain grey matter | 6.69e-15 | 29 |
regional part of telencephalon | 6.69e-15 | 29 |
telencephalon | 6.69e-15 | 29 |
pre-chordal neural plate | 1.54e-14 | 49 |
anterior neural tube | 3.97e-14 | 40 |
regional part of forebrain | 1.31e-13 | 39 |
forebrain | 1.31e-13 | 39 |
future forebrain | 1.31e-13 | 39 |
cerebral cortex | 1.89e-10 | 21 |
cerebral hemisphere | 1.89e-10 | 21 |
pallium | 1.89e-10 | 21 |
regional part of cerebral cortex | 3.53e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.