FFCP PHASE1:Hg19::chr10:15762346..15762358,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8516|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6144|TSSclassifier=W|UniProt=P53708|association_with_transcript=-222bp_to_ENST00000378076_5end|coexpression_cluster_id=C230|description=CAGE_peak_9_at_ITGA8_5end|id=chr10:15762346..15762358,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0000214;1.53e-09;3!CL:0002563;1.49e-07;4|ontology_enrichment_celltype_v019_2=CL:0000214,1.54e-09,3;CL:0000346,1.67e-09,3;CL:1000428,1.67e-09,3;CL:0002563,1.49e-07,4|ontology_enrichment_development_v019=UBERON:0004874;7.62e-26;1!UBERON:0003099;7.62e-26;1!UBERON:0003852;7.62e-26;1!UBERON:0005062;9.82e-26;4!UBERON:0007284;9.82e-26;4!UBERON:0006965;6.43e-14;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.18e-22!115;UBERON:0001950!1.37e-18!20;UBERON:0002619!9.74e-17!22;UBERON:0002780!7.36e-15!41;UBERON:0001890!7.36e-15!41;UBERON:0006240!7.36e-15!41;UBERON:0000956!1.70e-14!25;UBERON:0000203!1.70e-14!25;UBERON:0003080!2.01e-14!42;UBERON:0001871!1.27e-13!7;UBERON:0001869!9.15e-13!32;UBERON:0001049!1.23e-12!57;UBERON:0005068!1.23e-12!57;UBERON:0006241!1.23e-12!57;UBERON:0007135!1.23e-12!57;UBERON:0000955!3.01e-12!69;UBERON:0006238!3.01e-12!69;UBERON:0002616!4.50e-12!59;UBERON:0001017!4.57e-12!82;UBERON:0001893!7.20e-12!34;UBERON:0005743!2.82e-11!86;UBERON:0000073!6.98e-11!94;UBERON:0001016!6.98e-11!94;UBERON:0002791!1.82e-10!33;UBERON:0003075!2.54e-10!86;UBERON:0007284!2.54e-10!86;UBERON:0002020!4.28e-10!34;UBERON:0003528!4.28e-10!34;UBERON:0002346!1.19e-09!90;UBERON:0003056!7.28e-09!61;UBERON:0000033!3.19e-08!123;UBERON:0000153!1.34e-07!129;UBERON:0007811!1.34e-07!129;UBERON:0002360!4.32e-07!2;UBERON:0000094!4.32e-07!2;UBERON:0007645!4.32e-07!2|ontology_enrichment_uberon_v019=UBERON:0002146;2.78e-26;1!UBERON:0005623;2.78e-26;1!UBERON:0000989;7.62e-26;1!UBERON:0005705;7.62e-26;1!UBERON:0008811;7.62e-26;1!UBERON:0008193;7.62e-26;1!UBERON:0010912;7.62e-26;1!UBERON:0002514;7.62e-26;1!UBERON:0003457;7.62e-26;1!UBERON:0008907;7.62e-26;1!UBERON:0008001;7.62e-26;1!UBERON:0007213;7.62e-26;1!UBERON:0009891;7.62e-26;1!UBERON:0007914;7.62e-26;1!UBERON:0007375;7.62e-26;1!UBERON:0003323;7.62e-26;1!UBERON:0010258;7.62e-26;1!UBERON:0005253;7.62e-26;1!UBERON:0007842;7.62e-26;1!UBERON:0002397;7.62e-26;1!UBERON:0003113;7.62e-26;1!UBERON:0003277;7.62e-26;1!UBERON:0001709;7.62e-26;1!UBERON:0002244;7.62e-26;1!UBERON:0005620;7.62e-26;1!UBERON:0010364;7.62e-26;1!UBERON:0004288;7.62e-26;1!UBERON:0004089;1.21e-13;2!UBERON:0010313;6.28e-11;10!UBERON:0003978;1.10e-09;3!UBERON:0000946;1.10e-09;3!UBERON:0006915;1.53e-09;3!UBERON:0007616;1.53e-09;3!UBERON:0002217;1.53e-09;3!UBERON:0002018;1.53e-09;3!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3!UBERON:0001242;1.49e-07;4!UBERON:0001262;1.49e-07;4!UBERON:0004786;1.49e-07;4!UBERON:0004808;1.49e-07;4!UBERON:0001277;1.49e-07;4!UBERON:0001708;1.80e-07;4!UBERON:0008895;1.80e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.78e-26,1;UBERON:0005623,2.78e-26,1;UBERON:0000989,4.61e-26,1;UBERON:0008811,4.61e-26,1;UBERON:0006258,4.61e-26,1;UBERON:0005876,4.61e-26,1;UBERON:0004874,4.61e-26,1;UBERON:0005705,5.93e-26,1;UBERON:0008193,5.93e-26,1;UBERON:0010912,5.93e-26,1;UBERON:0002514,5.93e-26,1;UBERON:0003457,5.93e-26,1;UBERON:0008907,5.93e-26,1;UBERON:0008001,5.93e-26,1;UBERON:0007213,5.93e-26,1;UBERON:0009891,5.93e-26,1;UBERON:0007914,5.93e-26,1;UBERON:0009292,5.93e-26,1;UBERON:0003099,5.93e-26,1;UBERON:0007375,5.93e-26,1;UBERON:0003323,5.93e-26,1;UBERON:0010258,5.93e-26,1;UBERON:0007842,5.93e-26,1;UBERON:0009494,5.93e-26,1;UBERON:0010042,5.93e-26,1;UBERON:0010045,5.93e-26,1;UBERON:0010259,5.93e-26,1;UBERON:0010359,5.93e-26,1;UBERON:0009526,5.93e-26,1;UBERON:0002397,5.93e-26,1;UBERON:0003113,5.93e-26,1;UBERON:0003277,5.93e-26,1;UBERON:0001709,5.93e-26,1;UBERON:0004066,5.93e-26,1;UBERON:0002244,5.93e-26,1;UBERON:0005620,5.93e-26,1;UBERON:0004362,5.93e-26,1;UBERON:0010364,5.93e-26,1;UBERON:0010046,5.93e-26,1;UBERON:0005868,5.93e-26,1;UBERON:0007238,5.93e-26,1;UBERON:0004288,5.93e-26,1;UBERON:0004068,5.93e-26,1;UBERON:0010334,5.93e-26,1;UBERON:0003852,5.93e-26,1;UBERON:0010253,5.93e-26,1;UBERON:0005253,1.07e-13,2;UBERON:0004089,1.07e-13,2;UBERON:0010313,5.98e-11,10;UBERON:0002342,5.98e-11,10;UBERON:0005062,5.98e-11,10;UBERON:0003978,1.10e-09,3;UBERON:0009751,1.10e-09,3;UBERON:0000946,1.10e-09,3;UBERON:0002523,1.10e-09,3;UBERON:0005983,1.10e-09,3;UBERON:0002165,1.10e-09,3;UBERON:0002062,1.10e-09,3;UBERON:0007280,1.10e-09,3;UBERON:0006915,1.54e-09,3;UBERON:0007616,1.54e-09,3;UBERON:0002217,1.54e-09,3;UBERON:0002018,1.54e-09,3;UBERON:0000412,1.67e-09,3;UBERON:0001992,1.67e-09,3;UBERON:0001242,1.49e-07,4;UBERON:0001262,1.49e-07,4;UBERON:0004786,1.49e-07,4;UBERON:0004808,1.49e-07,4;UBERON:0001277,1.49e-07,4;UBERON:0001708,1.69e-07,4;UBERON:0008895,1.69e-07,4|phase1_expression=0,0.2141005238909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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |||
|TSSclassifier=W | |||
|UniProt=P53708 | |||
|association_with_transcript=-222bp_to_ENST00000378076_5end | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_9_at_ITGA8_5end | |||
|id=chr10:15762346..15762358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0000214;1.53e-09;3!CL:0002563;1.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.54e-09,3;CL:0000346,1.67e-09,3;CL:1000428,1.67e-09,3;CL:0002563,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.62e-26;1!UBERON:0003099;7.62e-26;1!UBERON:0003852;7.62e-26;1!UBERON:0005062;9.82e-26;4!UBERON:0007284;9.82e-26;4!UBERON:0006965;6.43e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002146;2.78e-26;1!UBERON:0005623;2.78e-26;1!UBERON:0000989;7.62e-26;1!UBERON:0005705;7.62e-26;1!UBERON:0008811;7.62e-26;1!UBERON:0008193;7.62e-26;1!UBERON:0010912;7.62e-26;1!UBERON:0002514;7.62e-26;1!UBERON:0003457;7.62e-26;1!UBERON:0008907;7.62e-26;1!UBERON:0008001;7.62e-26;1!UBERON:0007213;7.62e-26;1!UBERON:0009891;7.62e-26;1!UBERON:0007914;7.62e-26;1!UBERON:0007375;7.62e-26;1!UBERON:0003323;7.62e-26;1!UBERON:0010258;7.62e-26;1!UBERON:0005253;7.62e-26;1!UBERON:0007842;7.62e-26;1!UBERON:0002397;7.62e-26;1!UBERON:0003113;7.62e-26;1!UBERON:0003277;7.62e-26;1!UBERON:0001709;7.62e-26;1!UBERON:0002244;7.62e-26;1!UBERON:0005620;7.62e-26;1!UBERON:0010364;7.62e-26;1!UBERON:0004288;7.62e-26;1!UBERON:0004089;1.21e-13;2!UBERON:0010313;6.28e-11;10!UBERON:0003978;1.10e-09;3!UBERON:0000946;1.10e-09;3!UBERON:0006915;1.53e-09;3!UBERON:0007616;1.53e-09;3!UBERON:0002217;1.53e-09;3!UBERON:0002018;1.53e-09;3!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3!UBERON:0001242;1.49e-07;4!UBERON:0001262;1.49e-07;4!UBERON:0004786;1.49e-07;4!UBERON:0004808;1.49e-07;4!UBERON:0001277;1.49e-07;4!UBERON:0001708;1.80e-07;4!UBERON:0008895;1.80e-07;4 | |||
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|short_description=p9@ITGA8 | |||
}} |
Revision as of 12:37, 10 September 2013
Short description: | p9@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -222bp_to_ENST00000378076_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.54e-09 | 3 |
hair follicle dermal papilla cell | 1.67e-09 | 3 |
stem cell of epidermis | 1.67e-09 | 3 |
intestinal epithelial cell | 1.49e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.