FFCP PHASE1:Hg19::chr18:43913973..43914005,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=494470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31696|TSSclassifier=S|UniProt=Q6ZSG1,B3KVD1|association_with_transcript=-181bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end|coexpression_cluster_id=C1799|description=CAGE_peak_1_at_RNF165_5end|id=chr18:43913973..43914005,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;3.49e-07;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.07e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.67e-29!82;UBERON:0000073!1.90e-28!94;UBERON:0001016!1.90e-28!94;UBERON:0005743!4.38e-28!86;UBERON:0001049!3.71e-25!57;UBERON:0005068!3.71e-25!57;UBERON:0006241!3.71e-25!57;UBERON:0007135!3.71e-25!57;UBERON:0000955!1.14e-24!69;UBERON:0006238!1.14e-24!69;UBERON:0003080!3.84e-23!42;UBERON:0002616!5.27e-23!59;UBERON:0002780!6.03e-23!41;UBERON:0001890!6.03e-23!41;UBERON:0006240!6.03e-23!41;UBERON:0002346!6.18e-22!90;UBERON:0007023!1.82e-21!115;UBERON:0000924!1.93e-21!173;UBERON:0006601!1.93e-21!173;UBERON:0003075!3.59e-21!86;UBERON:0007284!3.59e-21!86;UBERON:0004121!1.29e-20!169;UBERON:0001869!1.73e-19!32;UBERON:0001893!2.09e-19!34;UBERON:0002791!7.68e-19!33;UBERON:0002020!9.54e-19!34;UBERON:0003528!9.54e-19!34;UBERON:0003056!1.29e-17!61;UBERON:0000153!2.00e-16!129;UBERON:0007811!2.00e-16!129;UBERON:0002619!4.80e-16!22;UBERON:0000956!6.65e-16!25;UBERON:0000203!6.65e-16!25;UBERON:0000033!7.61e-16!123;UBERON:0001950!7.51e-15!20;UBERON:0000064!6.70e-09!219|ontology_enrichment_uberon_v019=UBERON:0002619;9.61e-25;22!UBERON:0001869;2.71e-23;32!UBERON:0001950;1.10e-22;20!UBERON:0002791;9.98e-22;32!UBERON:0000956;5.67e-21;25!UBERON:0000203;5.67e-21;25!UBERON:0001893;1.80e-20;34!UBERON:0002780;1.11e-19;41!UBERON:0001890;1.11e-19;41!UBERON:0003528;1.16e-19;34!UBERON:0002020;1.16e-19;34!UBERON:0000073;6.12e-13;53!UBERON:0002616;6.12e-13;53!UBERON:0000955;1.06e-11;68!UBERON:0001017;1.21e-10;75!UBERON:0001016;2.85e-10;83!UBERON:0000200;3.86e-08;6!UBERON:0002021;1.33e-07;5!UBERON:0001872;3.13e-07;5!UBERON:0000013;3.49e-07;5!UBERON:0002410;3.49e-07;5!UBERON:0000922;4.84e-07;49!UBERON:0001871;8.98e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.48e-27,41;UBERON:0001890,2.48e-27,41;UBERON:0003080,2.48e-27,41;UBERON:0006240,2.48e-27,41;UBERON:0001016,1.16e-26,89;UBERON:0001869,3.61e-26,32;UBERON:0002619,6.95e-25,22;UBERON:0002791,3.87e-24,32;UBERON:0001017,4.27e-24,81;UBERON:0001893,4.30e-24,34;UBERON:0011216,4.72e-24,223;UBERON:0000073,1.10e-23,53;UBERON:0002616,1.10e-23,53;UBERON:0001049,5.12e-23,56;UBERON:0005068,5.12e-23,56;UBERON:0006241,5.12e-23,56;UBERON:0007135,5.12e-23,56;UBERON:0001950,8.53e-23,20;UBERON:0003528,3.32e-22,34;UBERON:0002020,3.32e-22,34;UBERON:0000955,5.07e-22,68;UBERON:0006238,5.07e-22,68;UBERON:0000956,4.28e-21,25;UBERON:0000203,4.28e-21,25;UBERON:0003056,2.21e-18,61;UBERON:0003075,9.67e-17,82;UBERON:0007284,9.67e-17,82;UBERON:0002346,2.43e-16,86;UBERON:0004121,1.80e-14,171;UBERON:0000924,1.80e-14,171;UBERON:0006601,1.80e-14,171;UBERON:0010371,2.10e-13,104;UBERON:0010314,1.90e-10,132;UBERON:0007023,2.43e-10,114;UBERON:0000200,2.76e-08,6;UBERON:0002021,1.11e-07,5;UBERON:0000013,2.69e-07,5;UBERON:0002410,2.69e-07,5;UBERON:0001872,3.24e-07,5;UBERON:0001871,9.31e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,1.47440361900905,0,0,0.791300934685361,0,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,0.393364276848904,0,1.54816123316076,0,0.6024118375565,4.43704812200145,0,0,0,0.553995408531877,0,1.08505435357926,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0.557052284425868,0,0.221533894583621,0,0.25618263945135,1.43065282315866,0.822189523018381,1.10540007114339,0.289803085735052,0,0,0,0.679856056185397,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0,0,0,0.378139268656271,1.33037638477538,0.966182642624386,1.37528029272598,0.364295288292542,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.49333509683432,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.813357600086629,2.38420426535352,1.26160425437814,0.36497735907583,0,0,0,0,0,1.18306800039844,2.36018566109342,1.92808823906786,1.8749975364507,1.52515610864684,1.89816495288877,1.21348177344148,0.588664395376038,1.53898862778556,0,0,0,0,2.53510069643662,2.94848165003288,1.77236972004421,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=494470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31696 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZSG1,B3KVD1 | |||
|association_with_transcript=-181bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | |||
|coexpression_cluster_id=C1799 | |||
|description=CAGE_peak_1_at_RNF165_5end | |||
|id=chr18:43913973..43914005,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.07e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.67e-29!82;UBERON:0000073!1.90e-28!94;UBERON:0001016!1.90e-28!94;UBERON:0005743!4.38e-28!86;UBERON:0001049!3.71e-25!57;UBERON:0005068!3.71e-25!57;UBERON:0006241!3.71e-25!57;UBERON:0007135!3.71e-25!57;UBERON:0000955!1.14e-24!69;UBERON:0006238!1.14e-24!69;UBERON:0003080!3.84e-23!42;UBERON:0002616!5.27e-23!59;UBERON:0002780!6.03e-23!41;UBERON:0001890!6.03e-23!41;UBERON:0006240!6.03e-23!41;UBERON:0002346!6.18e-22!90;UBERON:0007023!1.82e-21!115;UBERON:0000924!1.93e-21!173;UBERON:0006601!1.93e-21!173;UBERON:0003075!3.59e-21!86;UBERON:0007284!3.59e-21!86;UBERON:0004121!1.29e-20!169;UBERON:0001869!1.73e-19!32;UBERON:0001893!2.09e-19!34;UBERON:0002791!7.68e-19!33;UBERON:0002020!9.54e-19!34;UBERON:0003528!9.54e-19!34;UBERON:0003056!1.29e-17!61;UBERON:0000153!2.00e-16!129;UBERON:0007811!2.00e-16!129;UBERON:0002619!4.80e-16!22;UBERON:0000956!6.65e-16!25;UBERON:0000203!6.65e-16!25;UBERON:0000033!7.61e-16!123;UBERON:0001950!7.51e-15!20;UBERON:0000064!6.70e-09!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.61e-25;22!UBERON:0001869;2.71e-23;32!UBERON:0001950;1.10e-22;20!UBERON:0002791;9.98e-22;32!UBERON:0000956;5.67e-21;25!UBERON:0000203;5.67e-21;25!UBERON:0001893;1.80e-20;34!UBERON:0002780;1.11e-19;41!UBERON:0001890;1.11e-19;41!UBERON:0003528;1.16e-19;34!UBERON:0002020;1.16e-19;34!UBERON:0000073;6.12e-13;53!UBERON:0002616;6.12e-13;53!UBERON:0000955;1.06e-11;68!UBERON:0001017;1.21e-10;75!UBERON:0001016;2.85e-10;83!UBERON:0000200;3.86e-08;6!UBERON:0002021;1.33e-07;5!UBERON:0001872;3.13e-07;5!UBERON:0000013;3.49e-07;5!UBERON:0002410;3.49e-07;5!UBERON:0000922;4.84e-07;49!UBERON:0001871;8.98e-07;6 | |||
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| |||
|short_description=p1@RNF165 | |||
}} |
Revision as of 17:34, 11 September 2013
Short description: | p1@RNF165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNF165_5end |
Coexpression cluster: | C1799_occipital_duodenum_temporal_Wilms_brain_pineal_parietal |
Association with transcript: | -181bp_to_ENST00000269439, ENST00000543885, NM_152470, uc002lbz.2, uc002lca.1, uc002lcb.1, uc010dnn.1_5end |
EntrezGene: | RNF165 |
HGNC: | 31696 |
UniProt: | Q6ZSG1B3KVD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.