FFCP PHASE1:Hg19::chr19:54448934..54448966,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3|description=CAGE_peak_at_chr19:54448934..54448966,+|id=chr19:54448934..54448966,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;8.72e-07;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;3.36e-07;1!DOID:0070004;3.36e-07;1|ontology_enrichment_disease_v019_2=DOID:4960,2.82e-07,1;DOID:0070004,2.82e-07,1|ontology_enrichment_uberon=UBERON:0001049!3.03e-25!57;UBERON:0005068!3.03e-25!57;UBERON:0006241!3.03e-25!57;UBERON:0007135!3.03e-25!57;UBERON:0002619!9.03e-24!22;UBERON:0002020!3.37e-23!34;UBERON:0003528!3.37e-23!34;UBERON:0001017!3.53e-23!82;UBERON:0000073!4.16e-23!94;UBERON:0001016!4.16e-23!94;UBERON:0001893!7.11e-23!34;UBERON:0001869!7.97e-23!32;UBERON:0005743!8.71e-23!86;UBERON:0002780!2.17e-21!41;UBERON:0001890!2.17e-21!41;UBERON:0006240!2.17e-21!41;UBERON:0002791!2.35e-21!33;UBERON:0001950!4.97e-21!20;UBERON:0002616!6.38e-21!59;UBERON:0003080!1.06e-20!42;UBERON:0002346!1.57e-20!90;UBERON:0000956!2.49e-20!25;UBERON:0000203!2.49e-20!25;UBERON:0003075!2.82e-19!86;UBERON:0007284!2.82e-19!86;UBERON:0000955!1.12e-18!69;UBERON:0006238!1.12e-18!69;UBERON:0003056!1.44e-15!61;UBERON:0000025!4.66e-13!194;UBERON:0000200!2.72e-12!6;UBERON:0000924!4.40e-11!173;UBERON:0006601!4.40e-11!173;UBERON:0007023!4.74e-11!115;UBERON:0004121!3.50e-10!169;UBERON:0000033!4.59e-10!123;UBERON:0004111!1.04e-09!241;UBERON:0000477!1.34e-09!286;UBERON:0000153!3.85e-09!129;UBERON:0007811!3.85e-09!129;UBERON:0002771!6.46e-07!3;UBERON:0002021!6.89e-07!5;UBERON:0001872!7.19e-07!5|ontology_enrichment_uberon_v019=UBERON:0002619;5.01e-60;22!UBERON:0001950;4.16e-58;20!UBERON:0000956;1.05e-52;25!UBERON:0000203;1.05e-52;25!UBERON:0001869;1.86e-40;32!UBERON:0001893;8.36e-39;34!UBERON:0003528;1.64e-36;34!UBERON:0002020;1.64e-36;34!UBERON:0002791;5.36e-35;32!UBERON:0000200;1.51e-34;6!UBERON:0002780;2.56e-23;41!UBERON:0001890;2.56e-23;41!UBERON:0002021;8.05e-19;5!UBERON:0001872;1.16e-18;5!UBERON:0001870;2.23e-18;3!UBERON:0000073;1.21e-14;53!UBERON:0002616;1.21e-14;53!UBERON:0002702;6.79e-13;2!UBERON:0002771;2.55e-12;2!UBERON:0001017;1.79e-10;75!UBERON:0000955;3.92e-10;68!UBERON:0001871;9.76e-08;6!UBERON:0007190;2.29e-07;1!UBERON:0001016;2.35e-07;83!UBERON:0002581;3.36e-07;1!UBERON:0002902;3.36e-07;1!UBERON:0001282;3.36e-07;1!UBERON:0009842;3.36e-07;1!UBERON:0003704;3.36e-07;1!UBERON:0009899;3.36e-07;1!UBERON:0001171;3.36e-07;1!UBERON:0001172;3.36e-07;1!UBERON:0002022;8.72e-07;1!UBERON:0003112;8.72e-07;1!UBERON:0011158;8.72e-07;1!UBERON:0003128;8.72e-07;1!UBERON:0001703;8.72e-07;1!UBERON:0002241;8.72e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.59e-60,22;UBERON:0001950,1.30e-58,20;UBERON:0000956,3.83e-53,25;UBERON:0000203,3.83e-53,25;UBERON:0001869,8.99e-47,32;UBERON:0001893,6.90e-44,34;UBERON:0003528,1.04e-43,34;UBERON:0002020,1.04e-43,34;UBERON:0002791,3.90e-41,32;UBERON:0002780,5.95e-36,41;UBERON:0001890,5.95e-36,41;UBERON:0003080,5.95e-36,41;UBERON:0006240,5.95e-36,41;UBERON:0000200,9.39e-35,6;UBERON:0000073,1.35e-30,53;UBERON:0002616,1.35e-30,53;UBERON:0001049,8.88e-29,56;UBERON:0005068,8.88e-29,56;UBERON:0006241,8.88e-29,56;UBERON:0007135,8.88e-29,56;UBERON:0003056,4.77e-26,61;UBERON:0001017,7.02e-26,81;UBERON:0002346,2.56e-24,86;UBERON:0003075,3.83e-23,82;UBERON:0007284,3.83e-23,82;UBERON:0001016,6.72e-23,89;UBERON:0000955,1.07e-22,68;UBERON:0006238,1.07e-22,68;UBERON:0002021,6.60e-19,5;UBERON:0001872,7.56e-19,5;UBERON:0001870,2.31e-18,3;UBERON:0010371,2.23e-17,104;UBERON:0010314,6.46e-16,132;UBERON:0007023,5.66e-14,114;UBERON:0004121,1.04e-13,171;UBERON:0000924,1.04e-13,171;UBERON:0006601,1.04e-13,171;UBERON:0002702,5.56e-13,2;UBERON:0002771,1.77e-12,2;UBERON:0011216,2.26e-09,223;UBERON:0000025,1.69e-08,192;UBERON:0001871,8.50e-08,6;UBERON:0007190,2.22e-07,1;UBERON:0002902,3.17e-07,1;UBERON:0009899,3.17e-07,1;UBERON:0002581,3.78e-07,1;UBERON:0001282,4.01e-07,1;UBERON:0009842,4.01e-07,1;UBERON:0003704,4.01e-07,1;UBERON:0001171,4.01e-07,1;UBERON:0001172,4.01e-07,1;UBERON:0002022,5.06e-07,1;UBERON:0003112,6.02e-07,1;UBERON:0011158,6.02e-07,1;UBERON:0003128,6.02e-07,1;UBERON:0001703,6.02e-07,1;UBERON:0002241,6.02e-07,1;UBERON:0004761,6.02e-07,1;UBERON:0009617,6.02e-07,1|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr19:54448934..54448966,+ | |||
|id=chr19:54448934..54448966,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;3.36e-07;1!DOID:0070004;3.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.82e-07,1;DOID:0070004,2.82e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;5.01e-60;22!UBERON:0001950;4.16e-58;20!UBERON:0000956;1.05e-52;25!UBERON:0000203;1.05e-52;25!UBERON:0001869;1.86e-40;32!UBERON:0001893;8.36e-39;34!UBERON:0003528;1.64e-36;34!UBERON:0002020;1.64e-36;34!UBERON:0002791;5.36e-35;32!UBERON:0000200;1.51e-34;6!UBERON:0002780;2.56e-23;41!UBERON:0001890;2.56e-23;41!UBERON:0002021;8.05e-19;5!UBERON:0001872;1.16e-18;5!UBERON:0001870;2.23e-18;3!UBERON:0000073;1.21e-14;53!UBERON:0002616;1.21e-14;53!UBERON:0002702;6.79e-13;2!UBERON:0002771;2.55e-12;2!UBERON:0001017;1.79e-10;75!UBERON:0000955;3.92e-10;68!UBERON:0001871;9.76e-08;6!UBERON:0007190;2.29e-07;1!UBERON:0001016;2.35e-07;83!UBERON:0002581;3.36e-07;1!UBERON:0002902;3.36e-07;1!UBERON:0001282;3.36e-07;1!UBERON:0009842;3.36e-07;1!UBERON:0003704;3.36e-07;1!UBERON:0009899;3.36e-07;1!UBERON:0001171;3.36e-07;1!UBERON:0001172;3.36e-07;1!UBERON:0002022;8.72e-07;1!UBERON:0003112;8.72e-07;1!UBERON:0011158;8.72e-07;1!UBERON:0003128;8.72e-07;1!UBERON:0001703;8.72e-07;1!UBERON:0002241;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.59e-60,22;UBERON:0001950,1.30e-58,20;UBERON:0000956,3.83e-53,25;UBERON:0000203,3.83e-53,25;UBERON:0001869,8.99e-47,32;UBERON:0001893,6.90e-44,34;UBERON:0003528,1.04e-43,34;UBERON:0002020,1.04e-43,34;UBERON:0002791,3.90e-41,32;UBERON:0002780,5.95e-36,41;UBERON:0001890,5.95e-36,41;UBERON:0003080,5.95e-36,41;UBERON:0006240,5.95e-36,41;UBERON:0000200,9.39e-35,6;UBERON:0000073,1.35e-30,53;UBERON:0002616,1.35e-30,53;UBERON:0001049,8.88e-29,56;UBERON:0005068,8.88e-29,56;UBERON:0006241,8.88e-29,56;UBERON:0007135,8.88e-29,56;UBERON:0003056,4.77e-26,61;UBERON:0001017,7.02e-26,81;UBERON:0002346,2.56e-24,86;UBERON:0003075,3.83e-23,82;UBERON:0007284,3.83e-23,82;UBERON:0001016,6.72e-23,89;UBERON:0000955,1.07e-22,68;UBERON:0006238,1.07e-22,68;UBERON:0002021,6.60e-19,5;UBERON:0001872,7.56e-19,5;UBERON:0001870,2.31e-18,3;UBERON:0010371,2.23e-17,104;UBERON:0010314,6.46e-16,132;UBERON:0007023,5.66e-14,114;UBERON:0004121,1.04e-13,171;UBERON:0000924,1.04e-13,171;UBERON:0006601,1.04e-13,171;UBERON:0002702,5.56e-13,2;UBERON:0002771,1.77e-12,2;UBERON:0011216,2.26e-09,223;UBERON:0000025,1.69e-08,192;UBERON:0001871,8.50e-08,6;UBERON:0007190,2.22e-07,1;UBERON:0002902,3.17e-07,1;UBERON:0009899,3.17e-07,1;UBERON:0002581,3.78e-07,1;UBERON:0001282,4.01e-07,1;UBERON:0009842,4.01e-07,1;UBERON:0003704,4.01e-07,1;UBERON:0001171,4.01e-07,1;UBERON:0001172,4.01e-07,1;UBERON:0002022,5.06e-07,1;UBERON:0003112,6.02e-07,1;UBERON:0011158,6.02e-07,1;UBERON:0003128,6.02e-07,1;UBERON:0001703,6.02e-07,1;UBERON:0002241,6.02e-07,1;UBERON:0004761,6.02e-07,1;UBERON:0009617,6.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.365921118388786,1.19276791489337,0.116193942869518,0,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,1.03850885836724,0,0,0.200506470303285,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0.241192877250816,0,0.110579259931225,0,1.75508317723178,1.30726156222788,0,0,2.27884111694002,1.38338342632836,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0,0,0,0,0,0,0,0.176512253383001,0,0.274083849293502,0,2.089256266544,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,1.59045937961861,0.272406812223151,1.60753148465019,0.550157746388935,2.07720169014593,0,0,1.94398581305679,0,0,0,0.422401346077626,0.896436696664224,0,0,0,0,0,0,0,1.19730191562487,0.410462603746695,0.340776043570843,0.226624183040251,0,0,1.93924434542326,0.79339561045614,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.44052529803926,3.004582336956,0,0.332787154610557,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0,0,0,0.310525913752519,0.414706207840855,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,2.58322469491223,0,0,0,0,0,0.107824811396682,0,0,0,0.637724760305049,1.61116493536703,0,0,0,0,0,0,0.899209151350433,4.25089728976755,2.39450788585727,1.64093091392604,0,2.42050383624763,1.77623210195036,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,3.57949198477492,2.34323429584154,1.86018116851066,2.66346402814409,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,2.30204707469972,0,0,0,0,0,0,0,0,0.214429632529969,0,0.348724276104376,0,0,0,0,0,0,0.354996002191696,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,1.98950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,1.49581278420012,0,0,0,0,0,0.630832124175395,0.109265571963696,0,0,0.26721740526556,0.735159196278759,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:54448934..54448966,+ | |||
}} |
Revision as of 22:16, 11 September 2013
Short description: | p@chr19:54448934..54448966, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:54448934..54448966, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.82e-07 | 1 |
myeloma | 2.82e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.