FFCP PHASE1:Mm9::chr11:116168010..116168064,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53413|HGNC=|UniProt=O35250,A2AAN0,A2AAN4,Q3USE0,Q542L0|association_with_transcript=0bp_to_ENSMUST00000021147,ENSMUST00000106411,ENSMUST00000106413,ENSMUST00000133468,ENSMUST00000139699,NM_001162872,NM_016857,uc007mkt.2,uc007mku.2_5end|description=CAGE_peak_1_at_Exoc7_5end|id=chr11:116168010..116168064,-|ontology_enrichment_celltype=CL:0000117!1.70e-07!23;CL:0000337!1.70e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-07,23;CL:0000337,1.70e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.64e-15!52;UBERON:0005068!2.64e-15!52;UBERON:0006241!2.64e-15!52;UBERON:0007135!2.64e-15!52;UBERON:0002020!9.00e-14!34;UBERON:0002346!3.41e-12!71;UBERON:0003075!3.41e-12!71;UBERON:0007284!3.41e-12!71;UBERON:0003080!4.03e-12!40;UBERON:0002780!5.21e-12!39;UBERON:0001890!5.21e-12!39;UBERON:0006240!5.21e-12!39;UBERON:0003056!1.29e-11!49;UBERON:0000955!2.21e-11!50;UBERON:0006238!2.21e-11!50;UBERON:0000033!3.02e-11!63;UBERON:0002616!5.52e-11!49;UBERON:0002791!7.81e-11!29;UBERON:0003528!7.81e-11!29;UBERON:0001893!7.81e-11!29;UBERON:0001017!2.10e-10!73;UBERON:0005743!2.10e-10!73;UBERON:0004121!6.61e-10!102;UBERON:0000924!6.61e-10!102;UBERON:0006601!6.61e-10!102;UBERON:0000073!2.52e-09!75;UBERON:0001016!2.52e-09!75;UBERON:0007811!3.82e-09!86;UBERON:0000153!6.81e-09!94;UBERON:0000956!1.83e-08!21;UBERON:0001869!1.83e-08!21;UBERON:0000203!1.83e-08!21;UBERON:0004111!4.13e-08!122;UBERON:0000475!6.36e-08!200;UBERON:0000025!3.49e-07!114;UBERON:0002619!5.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.64e-15,52;UBERON:0005068,2.64e-15,52;UBERON:0006241,2.64e-15,52;UBERON:0007135,2.64e-15,52;UBERON:0002020,9.00e-14,34;UBERON:0000073,1.03e-13,54;UBERON:0002346,1.19e-12,64;UBERON:0003075,1.19e-12,64;UBERON:0007284,1.19e-12,64;UBERON:0000955,1.99e-12,47;UBERON:0006238,1.99e-12,47;UBERON:0003080,4.03e-12,40;UBERON:0010371,4.92e-12,73;UBERON:0002616,5.13e-12,46;UBERON:0002780,5.21e-12,39;UBERON:0001890,5.21e-12,39;UBERON:0006240,5.21e-12,39;UBERON:0003056,1.29e-11,49;UBERON:0003528,7.81e-11,29;UBERON:0002791,7.81e-11,29;UBERON:0001893,7.81e-11,29;UBERON:0001017,2.10e-10,73;UBERON:0004121,5.67e-10,95;UBERON:0000924,5.67e-10,95;UBERON:0006601,5.67e-10,95;UBERON:0001016,2.52e-09,75;UBERON:0000956,1.83e-08,21;UBERON:0001869,1.83e-08,21;UBERON:0000203,1.83e-08,21;UBERON:0004111,4.13e-08,122;UBERON:0010314,4.15e-08,92;UBERON:0000025,3.49e-07,114;UBERON:0002619,5.73e-07,17|phase1_expression=24.6629224541383,23.0323769041978,24.1149596876454,23.2897442706259,15.5277676283368,17.7952028226603,14.0167584357315,13.2997023144824,2.956563165185,1.63845168425395,5.13653904676515,8.13676021752431,15.0656642339461,15.3859908257435,13.9906099962578,11.9460407759997,11.8925519281785,14.9844528545163,14.3970155286026,14.004858509335,32.4014935475576,13.2056965097177,12.5375898786689,15.8392498565473,14.6821939882989,18.3754228516806,18.5227658348402,16.8067561494993,18.812318526181,21.926621289114,15.7428662565266,19.0509202037889,17.8368788399525,15.8481681015439,18.1976520443303,12.6338330472454,12.2501613757421,20.0895182753716,18.7520482685712,28.7938059185589,29.4115744015507,19.8083190637949,28.6451108288381,37.1395613027953,35.8874336517082,34.5067894063961,13.3006528539167,23.5467168890882,25.9229695626677,29.1644848611425,22.397827460058,28.7505128729943,12.5836954543302,10.1550699881588,13.779845764841,19.551717138732,14.6132054368766,14.4388185837684,35.4053806504296,30.6814767977779,36.7622214033584,23.041428180701,19.5644855144451,17.0980946283466,14.8329954385046,16.3410426437603,11.6844043102178,21.9004434033286,31.3142629171603,29.7013064329719,27.9732198597338,41.9906947073591,36.2224407160646,27.8054114217946,42.9387710161699,25.7381260250806,9.91042928994498,25.2820929408672,24.1162257212302,31.5208227675163,50.5926669121325,35.4221091978597,29.8725808931478,19.1339287410771,25.6701056265041,35.0608016713665,32.4607432221955,35.975093044283,11.6618337733103,16.3990285431725,19.1310562543107,12.0459342777394,10.1995700056163,25.9057531986152,20.7928453583254,25.9855594516455,29.2124393874044,26.9279909673331,24.9394564418754,23.3204119176825,18.5913314105218,21.815501160434,25.4805239706646,21.3320010945999,16.4533191168523,15.454951793981,11.62706223534,25.0062696584741,25.8937883647172,29.0946592567057,18.7364152907427,14.6143429589828,22.6003187310937,24.8692356911827,24.9288059127694,32.6733137457156,25.9554716121093,27.4738778147832,12.3845477272982,32.1916031395344,27.3843482890888,14.0613823409214,24.2309289583559,28.1069565131085,36.0248335719143,23.5020490791904,9.4653948359677,7.19883277192089,8.51370521389534,26.213361895844,29.2800385803921,51.3926300141615,31.1145533144175,26.5944075623544,25.1423533917068,31.9615288243483,29.5334155165917,21.7712198567663,31.843067562643,28.6200924005605,19.9084277732937,14.7137346837423,21.6074555766419,22.0029034040144,30.0721326248869,26.3914263786791,33.3578139432635,25.8703370739016,26.514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| ||
|EntrezGene=53413 | |||
|HGNC= | |||
|UniProt=O35250,A2AAN0,A2AAN4,Q3USE0,Q542L0 | |||
|association_with_transcript=0bp_to_ENSMUST00000021147,ENSMUST00000106411,ENSMUST00000106413,ENSMUST00000133468,ENSMUST00000139699,NM_001162872,NM_016857,uc007mkt.2,uc007mku.2_5end | |||
|description=CAGE_peak_1_at_Exoc7_5end | |||
|id=chr11:116168010..116168064,- | |||
|ontology_enrichment_celltype=CL:0000117!1.70e-07!23;CL:0000337!1.70e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-07,23;CL:0000337,1.70e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.64e-15!52;UBERON:0005068!2.64e-15!52;UBERON:0006241!2.64e-15!52;UBERON:0007135!2.64e-15!52;UBERON:0002020!9.00e-14!34;UBERON:0002346!3.41e-12!71;UBERON:0003075!3.41e-12!71;UBERON:0007284!3.41e-12!71;UBERON:0003080!4.03e-12!40;UBERON:0002780!5.21e-12!39;UBERON:0001890!5.21e-12!39;UBERON:0006240!5.21e-12!39;UBERON:0003056!1.29e-11!49;UBERON:0000955!2.21e-11!50;UBERON:0006238!2.21e-11!50;UBERON:0000033!3.02e-11!63;UBERON:0002616!5.52e-11!49;UBERON:0002791!7.81e-11!29;UBERON:0003528!7.81e-11!29;UBERON:0001893!7.81e-11!29;UBERON:0001017!2.10e-10!73;UBERON:0005743!2.10e-10!73;UBERON:0004121!6.61e-10!102;UBERON:0000924!6.61e-10!102;UBERON:0006601!6.61e-10!102;UBERON:0000073!2.52e-09!75;UBERON:0001016!2.52e-09!75;UBERON:0007811!3.82e-09!86;UBERON:0000153!6.81e-09!94;UBERON:0000956!1.83e-08!21;UBERON:0001869!1.83e-08!21;UBERON:0000203!1.83e-08!21;UBERON:0004111!4.13e-08!122;UBERON:0000475!6.36e-08!200;UBERON:0000025!3.49e-07!114;UBERON:0002619!5.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.64e-15,52;UBERON:0005068,2.64e-15,52;UBERON:0006241,2.64e-15,52;UBERON:0007135,2.64e-15,52;UBERON:0002020,9.00e-14,34;UBERON:0000073,1.03e-13,54;UBERON:0002346,1.19e-12,64;UBERON:0003075,1.19e-12,64;UBERON:0007284,1.19e-12,64;UBERON:0000955,1.99e-12,47;UBERON:0006238,1.99e-12,47;UBERON:0003080,4.03e-12,40;UBERON:0010371,4.92e-12,73;UBERON:0002616,5.13e-12,46;UBERON:0002780,5.21e-12,39;UBERON:0001890,5.21e-12,39;UBERON:0006240,5.21e-12,39;UBERON:0003056,1.29e-11,49;UBERON:0003528,7.81e-11,29;UBERON:0002791,7.81e-11,29;UBERON:0001893,7.81e-11,29;UBERON:0001017,2.10e-10,73;UBERON:0004121,5.67e-10,95;UBERON:0000924,5.67e-10,95;UBERON:0006601,5.67e-10,95;UBERON:0001016,2.52e-09,75;UBERON:0000956,1.83e-08,21;UBERON:0001869,1.83e-08,21;UBERON:0000203,1.83e-08,21;UBERON:0004111,4.13e-08,122;UBERON:0010314,4.15e-08,92;UBERON:0000025,3.49e-07,114;UBERON:0002619,5.73e-07,17 | |||
|phase1_expression=24.6629224541383,23.0323769041978,24.1149596876454,23.2897442706259,15.5277676283368,17.7952028226603,14.0167584357315,13.2997023144824,2.956563165185,1.63845168425395,5.13653904676515,8.13676021752431,15.0656642339461,15.3859908257435,13.9906099962578,11.9460407759997,11.8925519281785,14.9844528545163,14.3970155286026,14.004858509335,32.4014935475576,13.2056965097177,12.5375898786689,15.8392498565473,14.6821939882989,18.3754228516806,18.5227658348402,16.8067561494993,18.812318526181,21.926621289114,15.7428662565266,19.0509202037889,17.8368788399525,15.8481681015439,18.1976520443303,12.6338330472454,12.2501613757421,20.0895182753716,18.7520482685712,28.7938059185589,29.4115744015507,19.8083190637949,28.6451108288381,37.1395613027953,35.8874336517082,34.5067894063961,13.3006528539167,23.5467168890882,25.9229695626677,29.1644848611425,22.397827460058,28.7505128729943,12.5836954543302,10.1550699881588,13.779845764841,19.551717138732,14.6132054368766,14.4388185837684,35.4053806504296,30.6814767977779,36.7622214033584,23.041428180701,19.5644855144451,17.0980946283466,14.8329954385046,16.3410426437603,11.6844043102178,21.9004434033286,31.3142629171603,29.7013064329719,27.9732198597338,41.9906947073591,36.2224407160646,27.8054114217946,42.9387710161699,25.7381260250806,9.91042928994498,25.2820929408672,24.1162257212302,31.5208227675163,50.5926669121325,35.4221091978597,29.8725808931478,19.1339287410771,25.6701056265041,35.0608016713665,32.4607432221955,35.975093044283,11.6618337733103,16.3990285431725,19.1310562543107,12.0459342777394,10.1995700056163,25.9057531986152,20.7928453583254,25.9855594516455,29.2124393874044,26.9279909673331,24.9394564418754,23.3204119176825,18.5913314105218,21.815501160434,25.4805239706646,21.3320010945999,16.4533191168523,15.454951793981,11.62706223534,25.0062696584741,25.8937883647172,29.0946592567057,18.7364152907427,14.6143429589828,22.6003187310937,24.8692356911827,24.9288059127694,32.6733137457156,25.9554716121093,27.4738778147832,12.3845477272982,32.1916031395344,27.3843482890888,14.0613823409214,24.2309289583559,28.1069565131085,36.0248335719143,23.5020490791904,9.4653948359677,7.19883277192089,8.51370521389534,26.213361895844,29.2800385803921,51.3926300141615,31.1145533144175,26.5944075623544,25.1423533917068,31.9615288243483,29.5334155165917,21.7712198567663,31.843067562643,28.6200924005605,19.9084277732937,14.7137346837423,21.6074555766419,22.0029034040144,30.0721326248869,26.3914263786791,33.3578139432635,25.8703370739016,26.5148631307396,18.7215019366141,24.105304010461,26.0842921588814,22.799874436499,21.9398864908965,22.4302528684658,22.6899064173082,9.83098462238529,8.4924809347856,12.5031939734061,15.5344329401626,17.5894544985822,17.4660199617184,17.5191104333056,18.1023093207612,19.7461904495844,16.9749779667798,25.2176997315642,23.5865991581682,31.4309313334748,26.2667942526552,24.158505244665,23.3919979880532,18.8813099150304,24.1571553768669,29.0200129018496,36.6340420070253,36.6764849112016,25.9161555330273,15.9966187901425,13.7019636397659,16.8816374331942,22.386871233191,22.6825604721768,23.7782032640699,27.5226855695817,24.0460473897056,24.6308504624264,32.6288614147487,25.3453313254856,33.2563181202062,27.8818084338356,28.2780608021201,22.5704802134167,17.5942709418982,22.5415471346161,18.5322708339236,22.304536024277,25.9502533594179,29.7211724484009,33.3598934433901,27.1607799165578,23.3220639812203,22.5303996586233,13.1807633515714,10.2210677458866,12.8171404059367,15.0116489827492,16.6412240229168,13.7497959961967,16.3986798346962,17.1863340381537,21.1412288154823,8.62609239164127,27.5384301274693,23.0907878104775,29.0465709639179,23.6804585848924,27.9817242390753,27.3434721446575,17.0542270593436,20.3706220552532,16.4652733201932,19.0099101113687,24.1209010716215,24.9945822930314,27.3187107000918,25.6945284893091,30.5621271715309,33.1665918807573,22.7770007454876,24.1758974612254,25.6028833689276,24.1266054302836,25.5635671394793,18.6870423747234,27.0418011378638,28.0963532478636,23.9111840648094,13.4426655208874,37.3656972262472,14.1978698737316,12.1036010731958,16.1567548299599,17.9226598464414,23.3938607786514,22.0799694015289,16.5972387686707,13.4437694639203,17.392662229647,29.8828824272281,24.2717545706139,27.4221029647573,28.9938787649365,29.3646818891113,27.8764790513922,17.7229864393136,26.9067965698628,21.5009790921724,30.4160949667196,19.3684143204674,19.898978573953,25.8108947929029,24.241821730161,27.1791611824802,14.7586052004998,25.7838858120467,25.5329704315341,24.8484309763208,27.424040961944,25.9347812388227,20.9261475697883,29.4308549043416,27.15058839935,36.5357938937519,19.7124234773517,18.85305430688,29.109748543255,24.8978241941635,24.3811284310817,28.0455100915925,25.5456816166712,21.9948805658382,32.6458537025433,30.2243242277131,16.232733675796,23.1153292118809,14.0747840800981,17.706634958441,19.0004976532225,12.5827995263587,13.9382312594961,15.954465564897,10.0885980877229,16.2294005062569,20.7200075795644,2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| |||
|short_description=p1@Exoc7 | |||
}} |
Revision as of 18:51, 12 September 2013
Short description: | p1@Exoc7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Exoc7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000021147, ENSMUST00000106411, ENSMUST00000106413, ENSMUST00000133468, ENSMUST00000139699, NM_001162872, NM_016857, uc007mkt.2, uc007mku.2_5end |
EntrezGene: | Exoc7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.70e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.64e-15 | 52 |
neural rod | 2.64e-15 | 52 |
future spinal cord | 2.64e-15 | 52 |
neural keel | 2.64e-15 | 52 |
gray matter | 9.00e-14 | 34 |
regional part of nervous system | 1.03e-13 | 54 |
neurectoderm | 1.19e-12 | 64 |
neural plate | 1.19e-12 | 64 |
presumptive neural plate | 1.19e-12 | 64 |
brain | 1.99e-12 | 47 |
future brain | 1.99e-12 | 47 |
anterior neural tube | 4.03e-12 | 40 |
ecto-epithelium | 4.92e-12 | 73 |
regional part of brain | 5.13e-12 | 46 |
regional part of forebrain | 5.21e-12 | 39 |
forebrain | 5.21e-12 | 39 |
future forebrain | 5.21e-12 | 39 |
pre-chordal neural plate | 1.29e-11 | 49 |
brain grey matter | 7.81e-11 | 29 |
regional part of telencephalon | 7.81e-11 | 29 |
telencephalon | 7.81e-11 | 29 |
central nervous system | 2.10e-10 | 73 |
ectoderm-derived structure | 5.67e-10 | 95 |
ectoderm | 5.67e-10 | 95 |
presumptive ectoderm | 5.67e-10 | 95 |
nervous system | 2.52e-09 | 75 |
cerebral cortex | 1.83e-08 | 21 |
cerebral hemisphere | 1.83e-08 | 21 |
pallium | 1.83e-08 | 21 |
anatomical conduit | 4.13e-08 | 122 |
structure with developmental contribution from neural crest | 4.15e-08 | 92 |
tube | 3.49e-07 | 114 |
regional part of cerebral cortex | 5.73e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.