FFCP PHASE1:Hg19::chr3:124103223..124103237,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8997|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4814|TSSclassifier=N|UniProt=|association_with_transcript=-172bp_to_ENST00000522553_5end|coexpression_cluster_id=C3|description=CAGE_peak_20_at_KALRN_5end|id=chr3:124103223..124103237,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.78e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!6.39e-51!22;UBERON:0001950!8.22e-50!20;UBERON:0001869!1.21e-47!32;UBERON:0001893!1.25e-44!34;UBERON:0000956!1.49e-44!25;UBERON:0000203!1.49e-44!25;UBERON:0002791!1.71e-41!33;UBERON:0002020!3.60e-40!34;UBERON:0003528!3.60e-40!34;UBERON:0002780!3.92e-40!41;UBERON:0001890!3.92e-40!41;UBERON:0006240!3.92e-40!41;UBERON:0003080!4.47e-39!42;UBERON:0007023!1.25e-34!115;UBERON:0001049!3.07e-33!57;UBERON:0005068!3.07e-33!57;UBERON:0006241!3.07e-33!57;UBERON:0007135!3.07e-33!57;UBERON:0002616!6.12e-32!59;UBERON:0000955!2.73e-31!69;UBERON:0006238!2.73e-31!69;UBERON:0005743!1.03e-28!86;UBERON:0003056!2.86e-28!61;UBERON:0001017!7.32e-28!82;UBERON:0002346!1.34e-27!90;UBERON:0003075!8.16e-27!86;UBERON:0007284!8.16e-27!86;UBERON:0000073!1.96e-25!94;UBERON:0001016!1.96e-25!94;UBERON:0002021!2.31e-21!5;UBERON:0000153!3.07e-20!129;UBERON:0007811!3.07e-20!129;UBERON:0000033!7.05e-20!123;UBERON:0000200!3.59e-18!6;UBERON:0000924!7.93e-16!173;UBERON:0006601!7.93e-16!173;UBERON:0004121!4.60e-15!169;UBERON:0001872!1.58e-14!5;UBERON:0002771!3.87e-14!3;UBERON:0001871!1.24e-13!7;UBERON:0000064!1.52e-08!219;UBERON:0000025!1.94e-08!194;UBERON:0000349!4.50e-08!5|ontology_enrichment_uberon_v019=UBERON:0001950;6.02e-89;20!UBERON:0002619;3.97e-81;22!UBERON:0000956;1.19e-71;25!UBERON:0000203;1.19e-71;25!UBERON:0001893;1.85e-49;34!UBERON:0002791;9.28e-47;32!UBERON:0001869;9.28e-47;32!UBERON:0003528;9.59e-47;34!UBERON:0002020;9.59e-47;34!UBERON:0002771;2.08e-27;2!UBERON:0002780;8.79e-27;41!UBERON:0001890;8.79e-27;41!UBERON:0001872;1.10e-24;5!UBERON:0002021;2.01e-24;5!UBERON:0000200;1.79e-20;6!UBERON:0000073;5.22e-19;53!UBERON:0002616;5.22e-19;53!UBERON:0001870;1.24e-18;3!UBERON:0001871;1.20e-17;6!UBERON:0002902;1.31e-14;1!UBERON:0002022;1.31e-14;1!UBERON:0009899;1.31e-14;1!UBERON:0000955;1.79e-13;68!UBERON:0001017;4.76e-11;75!UBERON:0001016;4.77e-10;83!UBERON:0002702;5.94e-08;2!UBERON:0007023;2.69e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.51e-89,20;UBERON:0002619,1.79e-81,22;UBERON:0000956,5.88e-72,25;UBERON:0000203,5.88e-72,25;UBERON:0002791,1.80e-56,32;UBERON:0001869,1.80e-56,32;UBERON:0003528,3.50e-53,34;UBERON:0002020,3.50e-53,34;UBERON:0001893,3.50e-53,34;UBERON:0002780,3.91e-44,41;UBERON:0001890,3.91e-44,41;UBERON:0003080,3.91e-44,41;UBERON:0006240,3.91e-44,41;UBERON:0003056,9.49e-35,61;UBERON:0000073,4.54e-34,53;UBERON:0002616,4.54e-34,53;UBERON:0001049,3.25e-32,56;UBERON:0005068,3.25e-32,56;UBERON:0006241,3.25e-32,56;UBERON:0007135,3.25e-32,56;UBERON:0000955,1.44e-30,68;UBERON:0006238,1.44e-30,68;UBERON:0002771,9.31e-28,2;UBERON:0003075,1.25e-25,82;UBERON:0007284,1.25e-25,82;UBERON:0001017,1.42e-25,81;UBERON:0001872,1.30e-24,5;UBERON:0002021,1.30e-24,5;UBERON:0002346,2.18e-24,86;UBERON:0001016,6.12e-23,89;UBERON:0000200,1.42e-20,6;UBERON:0010371,5.68e-20,104;UBERON:0001870,9.50e-19,3;UBERON:0007023,2.94e-18,114;UBERON:0001871,1.04e-17,6;UBERON:0010314,1.82e-15,132;UBERON:0002902,5.42e-15,1;UBERON:0009899,5.42e-15,1;UBERON:0002022,9.36e-15,1;UBERON:0004121,1.88e-13,171;UBERON:0000924,1.88e-13,171;UBERON:0006601,1.88e-13,171;UBERON:0000025,1.54e-08,192;UBERON:0011216,2.12e-08,223;UBERON:0002702,7.03e-08,2|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.70939149080872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.51873891645062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.3771002377715,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,1.43670473151436,0.205116364240755,0.252071696221718,1.72893131160545,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,2.27355476151302,1.14148458349032,0,0,0,0.351742488719241,0,0,0,0,0.227662191351298,0.620916591138472,0,0,0.0679697329768317,0.986591603442736,0,0,0,0,0,0,0,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p20@KALRN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-172bp_to_ENST00000522553_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_20_at_KALRN_5end | |||
|id=chr3:124103223..124103237,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.78e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!6.39e-51!22;UBERON:0001950!8.22e-50!20;UBERON:0001869!1.21e-47!32;UBERON:0001893!1.25e-44!34;UBERON:0000956!1.49e-44!25;UBERON:0000203!1.49e-44!25;UBERON:0002791!1.71e-41!33;UBERON:0002020!3.60e-40!34;UBERON:0003528!3.60e-40!34;UBERON:0002780!3.92e-40!41;UBERON:0001890!3.92e-40!41;UBERON:0006240!3.92e-40!41;UBERON:0003080!4.47e-39!42;UBERON:0007023!1.25e-34!115;UBERON:0001049!3.07e-33!57;UBERON:0005068!3.07e-33!57;UBERON:0006241!3.07e-33!57;UBERON:0007135!3.07e-33!57;UBERON:0002616!6.12e-32!59;UBERON:0000955!2.73e-31!69;UBERON:0006238!2.73e-31!69;UBERON:0005743!1.03e-28!86;UBERON:0003056!2.86e-28!61;UBERON:0001017!7.32e-28!82;UBERON:0002346!1.34e-27!90;UBERON:0003075!8.16e-27!86;UBERON:0007284!8.16e-27!86;UBERON:0000073!1.96e-25!94;UBERON:0001016!1.96e-25!94;UBERON:0002021!2.31e-21!5;UBERON:0000153!3.07e-20!129;UBERON:0007811!3.07e-20!129;UBERON:0000033!7.05e-20!123;UBERON:0000200!3.59e-18!6;UBERON:0000924!7.93e-16!173;UBERON:0006601!7.93e-16!173;UBERON:0004121!4.60e-15!169;UBERON:0001872!1.58e-14!5;UBERON:0002771!3.87e-14!3;UBERON:0001871!1.24e-13!7;UBERON:0000064!1.52e-08!219;UBERON:0000025!1.94e-08!194;UBERON:0000349!4.50e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.02e-89;20!UBERON:0002619;3.97e-81;22!UBERON:0000956;1.19e-71;25!UBERON:0000203;1.19e-71;25!UBERON:0001893;1.85e-49;34!UBERON:0002791;9.28e-47;32!UBERON:0001869;9.28e-47;32!UBERON:0003528;9.59e-47;34!UBERON:0002020;9.59e-47;34!UBERON:0002771;2.08e-27;2!UBERON:0002780;8.79e-27;41!UBERON:0001890;8.79e-27;41!UBERON:0001872;1.10e-24;5!UBERON:0002021;2.01e-24;5!UBERON:0000200;1.79e-20;6!UBERON:0000073;5.22e-19;53!UBERON:0002616;5.22e-19;53!UBERON:0001870;1.24e-18;3!UBERON:0001871;1.20e-17;6!UBERON:0002902;1.31e-14;1!UBERON:0002022;1.31e-14;1!UBERON:0009899;1.31e-14;1!UBERON:0000955;1.79e-13;68!UBERON:0001017;4.76e-11;75!UBERON:0001016;4.77e-10;83!UBERON:0002702;5.94e-08;2!UBERON:0007023;2.69e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.51e-89,20;UBERON:0002619,1.79e-81,22;UBERON:0000956,5.88e-72,25;UBERON:0000203,5.88e-72,25;UBERON:0002791,1.80e-56,32;UBERON:0001869,1.80e-56,32;UBERON:0003528,3.50e-53,34;UBERON:0002020,3.50e-53,34;UBERON:0001893,3.50e-53,34;UBERON:0002780,3.91e-44,41;UBERON:0001890,3.91e-44,41;UBERON:0003080,3.91e-44,41;UBERON:0006240,3.91e-44,41;UBERON:0003056,9.49e-35,61;UBERON:0000073,4.54e-34,53;UBERON:0002616,4.54e-34,53;UBERON:0001049,3.25e-32,56;UBERON:0005068,3.25e-32,56;UBERON:0006241,3.25e-32,56;UBERON:0007135,3.25e-32,56;UBERON:0000955,1.44e-30,68;UBERON:0006238,1.44e-30,68;UBERON:0002771,9.31e-28,2;UBERON:0003075,1.25e-25,82;UBERON:0007284,1.25e-25,82;UBERON:0001017,1.42e-25,81;UBERON:0001872,1.30e-24,5;UBERON:0002021,1.30e-24,5;UBERON:0002346,2.18e-24,86;UBERON:0001016,6.12e-23,89;UBERON:0000200,1.42e-20,6;UBERON:0010371,5.68e-20,104;UBERON:0001870,9.50e-19,3;UBERON:0007023,2.94e-18,114;UBERON:0001871,1.04e-17,6;UBERON:0010314,1.82e-15,132;UBERON:0002902,5.42e-15,1;UBERON:0009899,5.42e-15,1;UBERON:0002022,9.36e-15,1;UBERON:0004121,1.88e-13,171;UBERON:0000924,1.88e-13,171;UBERON:0006601,1.88e-13,171;UBERON:0000025,1.54e-08,192;UBERON:0011216,2.12e-08,223;UBERON:0002702,7.03e-08,2 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.70939149080872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.51873891645062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.3771002377715,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,1.43670473151436,0.205116364240755,0.252071696221718,1.72893131160545,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,2.27355476151302,1.14148458349032,0,0,0,0.351742488719241,0,0,0,0,0.227662191351298,0.620916591138472,0,0,0.0679697329768317,0.986591603442736,0,0,0,0,0,0,0,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@KALRN | |||
}} |
Revision as of 21:15, 12 September 2013
Short description: | p20@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_KALRN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -172bp_to_ENST00000522553_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.