FFCP PHASE1:Mm9::chr12:53800284..53800398,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=238161|HGNC=|MCL_coexpression_id=1|UniProt=E9Q9K8,E9PYT2,Q3UHI8,Q3UHR2,Q6PGB9,Q6ZQD9|association_with_transcript=0bp_to_ENSMUST00000095737,ENSMUST00000110722,NM_198111,uc007nnm.1_5end|description=CAGE_peak_1_at_Akap6_5end|id=chr12:53800284..53800398,+|ontology_enrichment_celltype=CL:0000117!1.62e-13!23;CL:0000337!1.62e-13!23;CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0000221!5.89e-11!44;CL:0000133!5.89e-11!44;CL:0002319!7.74e-11!43;CL:0000393!2.26e-08!39;CL:0000211!2.26e-08!39;CL:0000055!4.28e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.52e-15,23;CL:0000337,3.52e-15,23;CL:0000540,1.50e-13,33;CL:0000047,1.50e-13,33;CL:0000031,1.50e-13,33;CL:0000404,1.50e-13,33;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0002319,1.72e-11,43;CL:0000393,1.33e-09,39;CL:0000211,1.33e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.04e-28!75;UBERON:0001016!3.04e-28!75;UBERON:0002346!4.08e-28!71;UBERON:0003075!4.08e-28!71;UBERON:0007284!4.08e-28!71;UBERON:0004121!4.93e-28!102;UBERON:0000924!4.93e-28!102;UBERON:0006601!4.93e-28!102;UBERON:0001017!6.90e-28!73;UBERON:0005743!6.90e-28!73;UBERON:0000033!9.96e-24!63;UBERON:0001049!3.26e-23!52;UBERON:0005068!3.26e-23!52;UBERON:0006241!3.26e-23!52;UBERON:0007135!3.26e-23!52;UBERON:0000955!3.50e-22!50;UBERON:0006238!3.50e-22!50;UBERON:0002616!1.79e-21!49;UBERON:0003056!6.99e-21!49;UBERON:0002020!2.81e-18!34;UBERON:0003080!8.22e-18!40;UBERON:0002780!4.20e-17!39;UBERON:0001890!4.20e-17!39;UBERON:0006240!4.20e-17!39;UBERON:0002791!2.22e-15!29;UBERON:0003528!2.22e-15!29;UBERON:0001893!2.22e-15!29;UBERON:0007811!1.47e-11!86;UBERON:0000956!1.00e-10!21;UBERON:0001869!1.00e-10!21;UBERON:0000203!1.00e-10!21;UBERON:0000153!1.28e-09!94;UBERON:0002619!9.51e-09!17;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.13e-31,75;UBERON:0001017,1.06e-30,73;UBERON:0002346,1.34e-30,64;UBERON:0003075,1.34e-30,64;UBERON:0007284,1.34e-30,64;UBERON:0000073,2.30e-28,54;UBERON:0004121,2.60e-28,95;UBERON:0000924,2.60e-28,95;UBERON:0006601,2.60e-28,95;UBERON:0001049,8.18e-27,52;UBERON:0005068,8.18e-27,52;UBERON:0006241,8.18e-27,52;UBERON:0007135,8.18e-27,52;UBERON:0010371,3.70e-25,73;UBERON:0003056,5.99e-24,49;UBERON:0000955,2.74e-23,47;UBERON:0006238,2.74e-23,47;UBERON:0002616,1.71e-22,46;UBERON:0002020,5.15e-21,34;UBERON:0003080,1.89e-20,40;UBERON:0010314,7.43e-20,92;UBERON:0002780,1.23e-19,39;UBERON:0001890,1.23e-19,39;UBERON:0006240,1.23e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.22e-12,21;UBERON:0001869,2.22e-12,21;UBERON:0000203,2.22e-12,21;UBERON:0002619,4.01e-10,17;UBERON:0002021,1.06e-09,10;UBERON:0000411,1.06e-09,10;UBERON:0001950,1.06e-09,10;UBERON:0003076,7.17e-07,12;UBERON:0003057,7.17e-07,12|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0408009051405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,2.18025156380447,0,0,0.979904951377538,1.43752564364972,0.167782606057736,0,0,0,0,0,65.7528497793693,79.3486468908049,51.9741750875067,0,0,0,0,0,3.89480143673926,6.91592949578798,29.0330914463737,24.5710807763677,28.604194743788,63.4145185376444,61.1805858435969,48.9963196859816,44.3764530814434,26.6573448116906,176.185409599022,122.452157223695,151.3024352574,74.2519799920991,65.871103393735,67.197824801822,93.2471216664612,119.868435936748,132.628879070271,123.74400589894,114.039716320081,80.3381611507046,2.72614295999463,10.4288752947364,0,0,0,0,0,0,5.47733238513832,0,0,0,3.66192891419369,0,0,0,0,0,0,2.96878087269556,0,4.89859058913922,11.6235168933311,14.0054120023585,8.07154240396205,12.2085338847624,15.0513545133702,2.13633205260448,0,0.433798070759735,0,0,0,0,1.86391761218122,131.458577858185,101.791099511339,0.766371165625774,0,0,0,192.031599716983,183.000241127451,80.2931310001204,200.419441181695,181.302259247204,160.204582355421,155.264888755844,0.305518091550949,0,0,12.416069497302,3.513251959993,16.3230494147766,21.2473313170312,23.811361218043,23.8808112021161,21.5231050078548,17.7096259417887,33.631438196072,0.215567992932842,0.567318240503458,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,148.25441373771,69.1518995188791,0,0,1.91959425481711,7.89604684325491,5.7990357594942,4.63872106633688,4.89231696458715,3.99473814836374,0.949058123089023,2.30578536613615,3.77002813200404,2.78539060857611,3.11942539390592,0,0.864552199498777,1.7922714592893,0.379335801906163,3.08470984046268,0,0.407302655690628,0.581857461502877,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,0.488894929326078,0.509235257325564,0,0,0.238043640886014,0.390267295715598,0,0.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| ||
|EntrezGene=238161 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9Q9K8,E9PYT2,Q3UHI8,Q3UHR2,Q6PGB9,Q6ZQD9 | |||
|association_with_transcript=0bp_to_ENSMUST00000095737,ENSMUST00000110722,NM_198111,uc007nnm.1_5end | |||
|description=CAGE_peak_1_at_Akap6_5end | |||
|id=chr12:53800284..53800398,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-13!23;CL:0000337!1.62e-13!23;CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0000221!5.89e-11!44;CL:0000133!5.89e-11!44;CL:0002319!7.74e-11!43;CL:0000393!2.26e-08!39;CL:0000211!2.26e-08!39;CL:0000055!4.28e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.52e-15,23;CL:0000337,3.52e-15,23;CL:0000540,1.50e-13,33;CL:0000047,1.50e-13,33;CL:0000031,1.50e-13,33;CL:0000404,1.50e-13,33;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0002319,1.72e-11,43;CL:0000393,1.33e-09,39;CL:0000211,1.33e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.04e-28!75;UBERON:0001016!3.04e-28!75;UBERON:0002346!4.08e-28!71;UBERON:0003075!4.08e-28!71;UBERON:0007284!4.08e-28!71;UBERON:0004121!4.93e-28!102;UBERON:0000924!4.93e-28!102;UBERON:0006601!4.93e-28!102;UBERON:0001017!6.90e-28!73;UBERON:0005743!6.90e-28!73;UBERON:0000033!9.96e-24!63;UBERON:0001049!3.26e-23!52;UBERON:0005068!3.26e-23!52;UBERON:0006241!3.26e-23!52;UBERON:0007135!3.26e-23!52;UBERON:0000955!3.50e-22!50;UBERON:0006238!3.50e-22!50;UBERON:0002616!1.79e-21!49;UBERON:0003056!6.99e-21!49;UBERON:0002020!2.81e-18!34;UBERON:0003080!8.22e-18!40;UBERON:0002780!4.20e-17!39;UBERON:0001890!4.20e-17!39;UBERON:0006240!4.20e-17!39;UBERON:0002791!2.22e-15!29;UBERON:0003528!2.22e-15!29;UBERON:0001893!2.22e-15!29;UBERON:0007811!1.47e-11!86;UBERON:0000956!1.00e-10!21;UBERON:0001869!1.00e-10!21;UBERON:0000203!1.00e-10!21;UBERON:0000153!1.28e-09!94;UBERON:0002619!9.51e-09!17;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.13e-31,75;UBERON:0001017,1.06e-30,73;UBERON:0002346,1.34e-30,64;UBERON:0003075,1.34e-30,64;UBERON:0007284,1.34e-30,64;UBERON:0000073,2.30e-28,54;UBERON:0004121,2.60e-28,95;UBERON:0000924,2.60e-28,95;UBERON:0006601,2.60e-28,95;UBERON:0001049,8.18e-27,52;UBERON:0005068,8.18e-27,52;UBERON:0006241,8.18e-27,52;UBERON:0007135,8.18e-27,52;UBERON:0010371,3.70e-25,73;UBERON:0003056,5.99e-24,49;UBERON:0000955,2.74e-23,47;UBERON:0006238,2.74e-23,47;UBERON:0002616,1.71e-22,46;UBERON:0002020,5.15e-21,34;UBERON:0003080,1.89e-20,40;UBERON:0010314,7.43e-20,92;UBERON:0002780,1.23e-19,39;UBERON:0001890,1.23e-19,39;UBERON:0006240,1.23e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.22e-12,21;UBERON:0001869,2.22e-12,21;UBERON:0000203,2.22e-12,21;UBERON:0002619,4.01e-10,17;UBERON:0002021,1.06e-09,10;UBERON:0000411,1.06e-09,10;UBERON:0001950,1.06e-09,10;UBERON:0003076,7.17e-07,12;UBERON:0003057,7.17e-07,12 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0408009051405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,2.18025156380447,0,0,0.979904951377538,1.43752564364972,0.167782606057736,0,0,0,0,0,65.7528497793693,79.3486468908049,51.9741750875067,0,0,0,0,0,3.89480143673926,6.91592949578798,29.0330914463737,24.5710807763677,28.604194743788,63.4145185376444,61.1805858435969,48.9963196859816,44.3764530814434,26.6573448116906,176.185409599022,122.452157223695,151.3024352574,74.2519799920991,65.871103393735,67.197824801822,93.2471216664612,119.868435936748,132.628879070271,123.74400589894,114.039716320081,80.3381611507046,2.72614295999463,10.4288752947364,0,0,0,0,0,0,5.47733238513832,0,0,0,3.66192891419369,0,0,0,0,0,0,2.96878087269556,0,4.89859058913922,11.6235168933311,14.0054120023585,8.07154240396205,12.2085338847624,15.0513545133702,2.13633205260448,0,0.433798070759735,0,0,0,0,1.86391761218122,131.458577858185,101.791099511339,0.766371165625774,0,0,0,192.031599716983,183.000241127451,80.2931310001204,200.419441181695,181.302259247204,160.204582355421,155.264888755844,0.305518091550949,0,0,12.416069497302,3.513251959993,16.3230494147766,21.2473313170312,23.811361218043,23.8808112021161,21.5231050078548,17.7096259417887,33.631438196072,0.215567992932842,0.567318240503458,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,148.25441373771,69.1518995188791,0,0,1.91959425481711,7.89604684325491,5.7990357594942,4.63872106633688,4.89231696458715,3.99473814836374,0.949058123089023,2.30578536613615,3.77002813200404,2.78539060857611,3.11942539390592,0,0.864552199498777,1.7922714592893,0.379335801906163,3.08470984046268,0,0.407302655690628,0.581857461502877,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,0.488894929326078,0.509235257325564,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0,0,0,0,0,192.339606805375,151.203075703942,0,0,1.57754109708128,1.56175497718655,4.09304455692318,1.43381278771531,0.668396022247182,1.41538265394416,1.61924280669958,3.21481443702443,3.16230222357219,173.192189551354,0,0,0.325773918707152,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,1.84461088766356,1.80899805217755,1.09060118843252,0.356497378384721,0.316036757935816,0,0,3.74483566329167,10.6236045478473,2.45781499187234,3.42939256050548,1.41872186913819,3.56737635204141,10.0374902567294,5.78483403317739,0,0,4.6310963591542,0,0.322928853391811,0.241251699712623,0.716234064018819,0,1.7488850197791,191.915187580878,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,2.37251995185852,5.48962561242491,5.29226170026826,2.71814784818809,1.9652630737156,1.61837215661785,2.56225712748541,0.785267825952089,1.03691978633434,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,1.01362607645082,1.23253148597793,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,3.86379188064381,0,0,0.214368379079066,0.501572104035363,262.044854974319,262.845710045598,262.386145155244,150.371534550727,198.673930733486,237.193683780366,214.657155073714,212.551607921832,241.071761579597,230.921099041312,15.0491653997056,49.4790843017279,39.6101965349591,24.3106717068294,15.0921477092147,9.74370594785075,26.002867152789,21.2216108956061,24.7107791385698,20.7211713646314,24.8409713892435,27.350819500981,16.6681883296391,20.103897855129,20.3895914792427,18.0991602687568,21.3227159738534,18.9051036054431,15.2471783297223,23.2574293812348,20.9150243955103,15.9728225543404,21.2208209053116,20.784537578423,23.621454484248,20.2228912861107,19.7562210702594,21.5717163379031,20.2348129630334,25.812544496256,19.9306830448613,19.1098695808593,18.415396942636,16.8881156892703,19.097754487133,44.2164722950164,17.3109390249602,16.9748132698156,9.37312827137333,6.17655973534643,3.94175320554716 | |||
|short_description=p1@Akap6 | |||
}} |
Revision as of 22:55, 12 September 2013
Short description: | p1@Akap6 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Akap6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000095737, ENSMUST00000110722, NM_198111, uc007nnm.1_5end |
EntrezGene: | Akap6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.52e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.52e-15 | 23 |
neuron | 1.50e-13 | 33 |
neuronal stem cell | 1.50e-13 | 33 |
neuroblast | 1.50e-13 | 33 |
electrically signaling cell | 1.50e-13 | 33 |
ectodermal cell | 1.25e-11 | 44 |
neurectodermal cell | 1.25e-11 | 44 |
neural cell | 1.72e-11 | 43 |
electrically responsive cell | 1.33e-09 | 39 |
electrically active cell | 1.33e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.